RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, human

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2A-208	ENST00000628734	CD33	P20138	364 aa		7.71	□□□□□ -1.18
UBE2A-208	ENST00000628734	NR1H3	Q13133	447 aa		7.71	□□□□□ -1.18
UBE2A-208	ENST00000628734	TPRN	Q4KMQ1	711 aa		7.71	□□□□□ -1.18
UBE2A-208	ENST00000628734	KRTAP4-7	Q9BYR0	210 aa		7.71	□□□□□ -1.18
UBE2A-208	ENST00000628734	ZCCHC2	Q9C0B9	1178 aa	Known RBP	7.71	□□□□□ -1.18
UBE2A-208	ENST00000628734	ESF1	Q9H501	851 aa	Known RBP	7.71	□□□□□ -1.18
UBE2A-208	ENST00000628734	SNRK	Q9NRH2	765 aa		7.71	□□□□□ -1.18
UBE2A-208	ENST00000628734	DNAAF2	Q9NVR5	837 aa	Known RBP	7.71	□□□□□ -1.18
UBE2A-208	ENST00000628734	APBA3	O96018	575 aa		7.7	□□□□□ -1.18
UBE2A-208	ENST00000628734	GNRH1	P01148	92 aa		7.7	□□□□□ -1.18
UBE2A-208	ENST00000628734	PCBP4	P57723	403 aa	Known RBP	7.7	□□□□□ -1.18
UBE2A-208	ENST00000628734	RNF20	Q5VTR2	975 aa		7.7	□□□□□ -1.18
UBE2A-208	ENST00000628734	CRISPLD1	Q9H336	500 aa		7.7	□□□□□ -1.18
UBE2A-208	ENST00000628734	NDUFB9	Q9Y6M9	179 aa		7.7	□□□□□ -1.18
UBE2A-208	ENST00000628734	DCDC2B	A2VCK2	349 aa		7.69	□□□□□ -1.18
UBE2A-208	ENST00000628734	APBB1	O00213	710 aa		7.69	□□□□□ -1.18
UBE2A-208	ENST00000628734	MCCD1	P59942	119 aa	Predicted RBP	7.69	□□□□□ -1.18
UBE2A-208	ENST00000628734	PRRT3	Q5FWE3	981 aa		7.69	□□□□□ -1.18
UBE2A-208	ENST00000628734	ZNF592	Q92610	1267 aa		7.69	□□□□□ -1.18
UBE2A-208	ENST00000628734	PCDHGC4	Q9Y5F7	938 aa		7.69	□□□□□ -1.18
UBE2A-208	ENST00000628734	GTF2E1	P29083	439 aa	Predicted RBP	7.68	□□□□□ -1.18
UBE2A-208	ENST00000628734	FIGNL1	Q6PIW4	674 aa		7.67	□□□□□ -1.18
UBE2A-208	ENST00000628734	XAGE2	Q96GT9	111 aa		7.67	□□□□□ -1.18
UBE2A-208	ENST00000628734	MAPT	P10636	758 aa	Known RBP	7.66	□□□□□ -1.18
UBE2A-208	ENST00000628734	LCE1D	Q5T752	114 aa		7.66	□□□□□ -1.18
UBE2A-208	ENST00000628734	ZNF330	Q9Y3S2	320 aa	Predicted RBP	7.66	□□□□□ -1.18
UBE2A-208	ENST00000628734	SPDYE3	A6NKU9	549 aa		7.65	□□□□□ -1.18
UBE2A-208	ENST00000628734	ATXN7	O15265	892 aa	Predicted RBP	7.65	□□□□□ -1.18
UBE2A-208	ENST00000628734	COBL	O75128	1261 aa		7.65	□□□□□ -1.18
UBE2A-208	ENST00000628734	STAU1	O95793	577 aa	Known RBP	7.65	□□□□□ -1.18
UBE2A-208	ENST00000628734	GRIK4	Q16099	956 aa		7.65	□□□□□ -1.18
UBE2A-208	ENST00000628734	MCTP1	Q6DN14	999 aa		7.65	□□□□□ -1.18
UBE2A-208	ENST00000628734	ATP4A	P20648	1035 aa		7.64	□□□□□ -1.19
UBE2A-208	ENST00000628734	PLA2G4A	P47712	749 aa		7.64	□□□□□ -1.19
UBE2A-208	ENST00000628734	TNP2	Q05952	138 aa		7.64	□□□□□ -1.19
UBE2A-208	ENST00000628734	RHBDD1	Q8TEB9	315 aa		7.64	□□□□□ -1.19
UBE2A-208	ENST00000628734	AVEN	Q9NQS1	362 aa	Predicted RBP	7.64	□□□□□ -1.19
UBE2A-208	ENST00000628734	FAM182B	Q5T319	152 aa		7.63	□□□□□ -1.19
UBE2A-208	ENST00000628734	ZNF468	Q5VIY5	522 aa	Predicted RBP	7.63	□□□□□ -1.19
UBE2A-208	ENST00000628734	TBC1D9	Q6ZT07	1266 aa		7.63	□□□□□ -1.19
UBE2A-208	ENST00000628734	CDCA7	Q9BWT1	371 aa	Predicted RBP	7.63	□□□□□ -1.19
UBE2A-208	ENST00000628734	PRR12	Q9ULL5	1215 aa		7.63	□□□□□ -1.19
UBE2A-208	ENST00000628734	KHNYN	O15037	678 aa	Known RBP	7.62	□□□□□ -1.19
UBE2A-208	ENST00000628734	TSGA10IP	Q3SY00	556 aa		7.62	□□□□□ -1.19
UBE2A-208	ENST00000628734	NLRP8	Q86W28	1048 aa		7.62	□□□□□ -1.19
UBE2A-208	ENST00000628734	PPARGC1B	Q86YN6	1023 aa	Known RBP	7.62	□□□□□ -1.19
UBE2A-208	ENST00000628734	CCDC85A	Q96PX6	553 aa	Predicted RBP	7.62	□□□□□ -1.19
UBE2A-208	ENST00000628734	CEP126	Q9P2H0	1117 aa		7.62	□□□□□ -1.19
UBE2A-208	ENST00000628734	H2AFB1	P0C5Y9	115 aa		7.61	□□□□□ -1.19
UBE2A-208	ENST00000628734	H2AFB2	P0C5Z0	115 aa		7.61	□□□□□ -1.19
UBE2A-208	ENST00000628734	COL9A3	Q14050	684 aa	Predicted RBP	7.61	□□□□□ -1.19
UBE2A-208	ENST00000628734	ELOA3C	A0A087WX78	387 aa	Predicted RBP	7.6	□□□□□ -1.19
UBE2A-208	ENST00000628734	ELOA3D	A6NLF2	546 aa	Predicted RBP	7.6	□□□□□ -1.19
UBE2A-208	ENST00000628734	TRIM28	Q13263	835 aa	Known RBP	7.6	□□□□□ -1.19
UBE2A-208	ENST00000628734	IRF5	Q13568	498 aa		7.6	□□□□□ -1.19
UBE2A-208	ENST00000628734	ELOA3B	Q3SY89	546 aa		7.6	□□□□□ -1.19
UBE2A-208	ENST00000628734	C8orf86	Q6ZUL3	223 aa		7.6	□□□□□ -1.19
UBE2A-208	ENST00000628734	PHTF2	Q8N3S3	785 aa		7.6	□□□□□ -1.19
UBE2A-208	ENST00000628734	ELOA3	Q8NG57	546 aa		7.6	□□□□□ -1.19
UBE2A-208	ENST00000628734	NACC1	Q96RE7	527 aa		7.6	□□□□□ -1.19
UBE2A-208	ENST00000628734	TBC1D2B	Q9UPU7	963 aa		7.6	□□□□□ -1.19
UBE2A-208	ENST00000628734		A0A1W2PNR3	127 aa		7.59	□□□□□ -1.19
UBE2A-208	ENST00000628734		M0R082	166 aa		7.59	□□□□□ -1.19
UBE2A-208	ENST00000628734	MYC	P01106	439 aa	Predicted RBP	7.59	□□□□□ -1.19
UBE2A-208	ENST00000628734	ALAS2	P22557	587 aa		7.59	□□□□□ -1.19
UBE2A-208	ENST00000628734	TLR1	Q15399	786 aa		7.59	□□□□□ -1.19
UBE2A-208	ENST00000628734	ZNF417	Q8TAU3	575 aa		7.59	□□□□□ -1.19
UBE2A-208	ENST00000628734	AIDA	Q96BJ3	306 aa		7.59	□□□□□ -1.19
UBE2A-208	ENST00000628734	ZNF587	Q96SQ5	575 aa	Predicted RBP	7.59	□□□□□ -1.19
UBE2A-208	ENST00000628734	STRN4	Q9NRL3	753 aa		7.59	□□□□□ -1.19
UBE2A-208	ENST00000628734	ESCO1	Q5FWF5	840 aa		7.58	□□□□□ -1.2
UBE2A-208	ENST00000628734	ARSJ	Q5FYB0	599 aa	Predicted RBP	7.58	□□□□□ -1.2
UBE2A-208	ENST00000628734	ETNK1	Q9HBU6	452 aa		7.58	□□□□□ -1.2
UBE2A-208	ENST00000628734	MDFI	Q99750	246 aa		7.57	□□□□□ -1.2
UBE2A-208	ENST00000628734	MBTPS1	Q14703	1052 aa		7.56	□□□□□ -1.2
UBE2A-208	ENST00000628734	SYT9	Q86SS6	491 aa		7.56	□□□□□ -1.2
UBE2A-208	ENST00000628734	C1orf216	Q8TAB5	229 aa		7.56	□□□□□ -1.2
UBE2A-208	ENST00000628734	PRM3	Q9NNZ6	103 aa		7.56	□□□□□ -1.2
UBE2A-208	ENST00000628734	PAX4	O43316	350 aa		7.55	□□□□□ -1.2
UBE2A-208	ENST00000628734	ALB	P02768	609 aa		7.55	□□□□□ -1.2
UBE2A-208	ENST00000628734	EIF4G2	P78344	907 aa	Known RBP eCLIP	7.55	□□□□□ -1.2
UBE2A-208	ENST00000628734	ADGRE1	Q14246	886 aa		7.55	□□□□□ -1.2
UBE2A-208	ENST00000628734	TP53INP1	Q96A56	240 aa		7.55	□□□□□ -1.2
UBE2A-208	ENST00000628734	CHIC2	Q9UKJ5	165 aa		7.55	□□□□□ -1.2
UBE2A-208	ENST00000628734	STARD13	Q9Y3M8	1113 aa		7.55	□□□□□ -1.2
UBE2A-208	ENST00000628734	FAM157B	P0CG42	384 aa		7.54	□□□□□ -1.2
UBE2A-208	ENST00000628734	ELN	P15502	786 aa		7.54	□□□□□ -1.2
UBE2A-208	ENST00000628734	SELP	P16109	830 aa		7.54	□□□□□ -1.2
UBE2A-208	ENST00000628734	YBX3	P16989	372 aa	Known RBP eCLIP	7.54	□□□□□ -1.2	3e-7	■■□□□ 11.5
UBE2A-208	ENST00000628734	MARK1	Q9P0L2	795 aa		7.54	□□□□□ -1.2
UBE2A-208	ENST00000628734	C9orf172	C9J069	976 aa		7.53	□□□□□ -1.2
UBE2A-208	ENST00000628734	NID1	P14543	1247 aa		7.53	□□□□□ -1.2
UBE2A-208	ENST00000628734	TXK	P42681	527 aa		7.53	□□□□□ -1.2
UBE2A-208	ENST00000628734	TXNRD3	Q86VQ6	643 aa		7.53	□□□□□ -1.2
UBE2A-208	ENST00000628734	MICALL1	Q8N3F8	863 aa		7.53	□□□□□ -1.2
UBE2A-208	ENST00000628734	COL17A1	Q9UMD9	1497 aa	Predicted RBP	7.53	□□□□□ -1.2
UBE2A-208	ENST00000628734	MCM6	Q14566	821 aa		7.52	□□□□□ -1.21
UBE2A-208	ENST00000628734	PRDM6	Q9NQX0	595 aa		7.52	□□□□□ -1.21
UBE2A-208	ENST00000628734	SHISA2	Q6UWI4	295 aa		7.51	□□□□□ -1.21
UBE2A-208	ENST00000628734	ZIC5	Q96T25	663 aa		7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms