RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 KRT24Q2M2I5 525 aa11.02□□□□□ -0.65
SGMS1-211ENST00000626236 ILDR2Q71H61 639 aa11.02□□□□□ -0.65
SGMS1-211ENST00000626236 HEG1Q9ULI3 1381 aa11.02□□□□□ -0.65
SGMS1-211ENST00000626236 ELL2O00472 640 aaPredicted RBP11.01□□□□□ -0.65
SGMS1-211ENST00000626236 C8orf58Q8NAV2 365 aa11.01□□□□□ -0.65
SGMS1-211ENST00000626236 LOC102724428A0A0B4J2F2 783 aa11□□□□□ -0.65
SGMS1-211ENST00000626236 PRAMEF22A3QJZ6 481 aa11□□□□□ -0.65
SGMS1-211ENST00000626236 ATP6V1AP38606 617 aa11□□□□□ -0.65
SGMS1-211ENST00000626236 SIK1P57059 783 aa11□□□□□ -0.65
SGMS1-211ENST00000626236 TWISTNBQ3B726 338 aaPredicted RBP11□□□□□ -0.65
SGMS1-211ENST00000626236 RREB1Q92766 1687 aa11□□□□□ -0.65
SGMS1-211ENST00000626236 PLSCR1O15162 318 aa10.99□□□□□ -0.65
SGMS1-211ENST00000626236 GIGYF1O75420 1035 aaPredicted RBP10.99□□□□□ -0.65
SGMS1-211ENST00000626236 SNRPA1P09661 255 aaKnown RBP10.99□□□□□ -0.65
SGMS1-211ENST00000626236 KCNQ4P56696 695 aa10.99□□□□□ -0.65
SGMS1-211ENST00000626236 VSIG10Q8N0Z9 540 aa10.99□□□□□ -0.65
SGMS1-211ENST00000626236 TSPYL6Q8N831 410 aa10.99□□□□□ -0.65
SGMS1-211ENST00000626236 SLC4A9Q96Q91 983 aa10.99□□□□□ -0.65
SGMS1-211ENST00000626236 CCNL1Q9UK58 526 aaPredicted RBP10.99□□□□□ -0.65
SGMS1-211ENST00000626236 C4BP0C0L5 1744 aa10.98□□□□□ -0.65
SGMS1-211ENST00000626236 NUP188Q5SRE5 1749 aa10.98□□□□□ -0.65
SGMS1-211ENST00000626236 BAG6P46379 1132 aa10.98□□□□□ -0.65
SGMS1-211ENST00000626236 CCDC125Q86Z20 511 aa10.98□□□□□ -0.65
SGMS1-211ENST00000626236 DNAJC10Q8IXB1 793 aa10.98□□□□□ -0.65
SGMS1-211ENST00000626236 NECTIN2Q92692 538 aa10.98□□□□□ -0.65
SGMS1-211ENST00000626236 VAMP4O75379 141 aa10.97□□□□□ -0.65
SGMS1-211ENST00000626236 HOXB7P09629 217 aa10.97□□□□□ -0.65
SGMS1-211ENST00000626236 EIF2S2P20042 333 aaKnown RBP10.97□□□□□ -0.65
SGMS1-211ENST00000626236 EN1Q05925 392 aaPredicted RBP10.97□□□□□ -0.65
SGMS1-211ENST00000626236 ITPK1Q13572 414 aa10.97□□□□□ -0.65
SGMS1-211ENST00000626236 TXNRD1Q16881 649 aa10.97□□□□□ -0.65
SGMS1-211ENST00000626236 DEFB132Q7Z7B7 95 aa10.97□□□□□ -0.65
SGMS1-211ENST00000626236 PROM2Q8N271 834 aa10.97□□□□□ -0.65
SGMS1-211ENST00000626236 UPF1Q92900 1129 aaKnown RBP eCLIP10.97□□□□□ -0.65
SGMS1-211ENST00000626236 TEX13AQ9BXU3 409 aaPredicted RBP10.97□□□□□ -0.65
SGMS1-211ENST00000626236 SOS1Q07889 1333 aaPredicted RBP10.97□□□□□ -0.65
SGMS1-211ENST00000626236 CACNA1FO60840 1977 aa10.96□□□□□ -0.65
SGMS1-211ENST00000626236 EZH2Q15910 746 aaKnown RBP10.96□□□□□ -0.65
SGMS1-211ENST00000626236 SLC27A3Q5K4L6 730 aa10.96□□□□□ -0.65
SGMS1-211ENST00000626236 HDGFL1Q5TGJ6 251 aa10.96□□□□□ -0.65
SGMS1-211ENST00000626236 CLEC11AQ9Y240 323 aa10.96□□□□□ -0.65
SGMS1-211ENST00000626236 USP16Q9Y5T5 823 aa10.96□□□□□ -0.65
SGMS1-211ENST00000626236 MYH14Q7Z406 1995 aaKnown RBP10.96□□□□□ -0.66
SGMS1-211ENST00000626236 TCERG1O14776 1098 aaKnown RBP10.95□□□□□ -0.66
SGMS1-211ENST00000626236 STARD3NLO95772 234 aa10.95□□□□□ -0.66
SGMS1-211ENST00000626236 CT47B1P0C2W7 299 aaPredicted RBP10.95□□□□□ -0.66
SGMS1-211ENST00000626236 CYP19A1P11511 503 aaPredicted RBP10.95□□□□□ -0.66
SGMS1-211ENST00000626236 LINC00116Q8NCU8 138 aa10.95□□□□□ -0.66
SGMS1-211ENST00000626236 CAMKK2Q96RR4 588 aa10.95□□□□□ -0.66
SGMS1-211ENST00000626236 LRRC4BQ9NT99 713 aa10.95□□□□□ -0.66
SGMS1-211ENST00000626236 TUBGCP6Q96RT7 1819 aa10.95□□□□□ -0.66
SGMS1-211ENST00000626236 PIP4K2AP48426 406 aaPredicted RBP10.94□□□□□ -0.66
SGMS1-211ENST00000626236 CCDC30Q5VVM6 783 aa10.94□□□□□ -0.66
SGMS1-211ENST00000626236 UBR3Q6ZT12 1888 aa10.93□□□□□ -0.66
SGMS1-211ENST00000626236 PITPNM1O00562 1244 aa10.93□□□□□ -0.66
SGMS1-211ENST00000626236 A1BGP04217 495 aa10.93□□□□□ -0.66
SGMS1-211ENST00000626236 MYL6BP14649 208 aa10.93□□□□□ -0.66
SGMS1-211ENST00000626236 CRKLP46109 303 aaKnown RBP10.93□□□□□ -0.66
SGMS1-211ENST00000626236 BCL2L13Q9BXK5 485 aa10.93□□□□□ -0.66
SGMS1-211ENST00000626236 STK31Q9BXU1 1019 aa10.93□□□□□ -0.66
SGMS1-211ENST00000626236 CHMP4AQ9BY43 222 aa10.93□□□□□ -0.66
SGMS1-211ENST00000626236 CCDC87Q9NVE4 849 aa10.93□□□□□ -0.66
SGMS1-211ENST00000626236 CHPF2Q9P2E5 772 aa10.93□□□□□ -0.66
SGMS1-211ENST00000626236 CNTNAP4Q9C0A0 1308 aa10.92□□□□□ -0.66
SGMS1-211ENST00000626236 ANXA1P04083 346 aa10.92□□□□□ -0.66
SGMS1-211ENST00000626236 CENPBP07199 599 aaPredicted RBP10.92□□□□□ -0.66
SGMS1-211ENST00000626236 CANXP27824 592 aaKnown RBP10.92□□□□□ -0.66
SGMS1-211ENST00000626236 RARSP54136 660 aaKnown RBP10.92□□□□□ -0.66
SGMS1-211ENST00000626236 SSH1Q8WYL5 1049 aa10.92□□□□□ -0.66
SGMS1-211ENST00000626236 ZNF428Q96B54 188 aa10.92□□□□□ -0.66
SGMS1-211ENST00000626236 AK7Q96M32 723 aa10.92□□□□□ -0.66
SGMS1-211ENST00000626236 SMC4Q9NTJ3 1288 aa10.92□□□□□ -0.66
SGMS1-211ENST00000626236 DBF4Q9UBU7 674 aaPredicted RBP10.92□□□□□ -0.66
SGMS1-211ENST00000626236 RCAN3Q9UKA8 241 aa10.92□□□□□ -0.66
SGMS1-211ENST00000626236 ZBTB1Q9Y2K1 713 aa10.92□□□□□ -0.66
SGMS1-211ENST00000626236 ZNF330Q9Y3S2 320 aaPredicted RBP10.92□□□□□ -0.66
SGMS1-211ENST00000626236 C4AP0C0L4 1744 aa10.92□□□□□ -0.66
SGMS1-211ENST00000626236 ERBB4Q15303 1308 aa10.91□□□□□ -0.66
SGMS1-211ENST00000626236 NBPF26B4DH59 902 aa10.91□□□□□ -0.66
SGMS1-211ENST00000626236 GNPATO15228 680 aa10.91□□□□□ -0.66
SGMS1-211ENST00000626236 HMGB2P26583 209 aaKnown RBP10.91□□□□□ -0.66
SGMS1-211ENST00000626236 PDIA6Q15084 440 aa10.91□□□□□ -0.66
SGMS1-211ENST00000626236 PROSER3Q2NL68 480 aa10.91□□□□□ -0.66
SGMS1-211ENST00000626236 ALDH1L2Q3SY69 923 aa10.91□□□□□ -0.66
SGMS1-211ENST00000626236 NBPF14Q5TI25 921 aa10.91□□□□□ -0.66
SGMS1-211ENST00000626236 NBPF10Q6P3W6 841 aaKnown RBP10.91□□□□□ -0.66
SGMS1-211ENST00000626236 INTS5Q6P9B9 1019 aaKnown RBP10.91□□□□□ -0.66
SGMS1-211ENST00000626236 NBPF15Q8N660 670 aa10.91□□□□□ -0.66
SGMS1-211ENST00000626236 DDX21Q9NR30 783 aaKnown RBP eCLIP10.91□□□□□ -0.66
SGMS1-211ENST00000626236 QSER1Q2KHR3 1735 aa10.91□□□□□ -0.66
SGMS1-211ENST00000626236 BCAR3O75815 825 aa10.9□□□□□ -0.66
SGMS1-211ENST00000626236 RC3H1Q5TC82 1133 aaKnown RBP10.9□□□□□ -0.66
SGMS1-211ENST00000626236 MRPL50Q8N5N7 158 aaKnown RBP10.9□□□□□ -0.66
SGMS1-211ENST00000626236 SPDYE1Q8NFV5 336 aaPredicted RBP10.9□□□□□ -0.66
SGMS1-211ENST00000626236 BCORQ6W2J9 1755 aa10.9□□□□□ -0.67
SGMS1-211ENST00000626236 ARFGEF2Q9Y6D5 1785 aa10.9□□□□□ -0.67
SGMS1-211ENST00000626236 PHF14O94880 888 aa10.89□□□□□ -0.67
SGMS1-211ENST00000626236 ZNF827Q17R98 1081 aa10.89□□□□□ -0.67
SGMS1-211ENST00000626236 NPM2Q86SE8 214 aaKnown RBP10.89□□□□□ -0.67
SGMS1-211ENST00000626236 PHAXQ9H814 394 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms