RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 PCDH10Q9P2E7 1040 aa13.21□□□□□ -0.29
ATRX-216ENST00000624403 STK24Q9Y6E0 443 aa13.21□□□□□ -0.29
ATRX-216ENST00000624403 OVOS2A0A0G2JMS6 1433 aa13.21□□□□□ -0.3
ATRX-216ENST00000624403 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
ATRX-216ENST00000624403 STK25O00506 426 aa13.2□□□□□ -0.3
ATRX-216ENST00000624403 PIP4K2BP78356 416 aa13.2□□□□□ -0.3
ATRX-216ENST00000624403 FTSJ3Q8IY81 847 aaKnown RBP13.2□□□□□ -0.3
ATRX-216ENST00000624403 SPG7Q9UQ90 795 aa13.2□□□□□ -0.3
ATRX-216ENST00000624403 PHLPP1O60346 1717 aa13.19□□□□□ -0.3
ATRX-216ENST00000624403 TOM1L2Q6ZVM7 507 aa13.19□□□□□ -0.3
ATRX-216ENST00000624403 COL16A1Q07092 1604 aaPredicted RBP13.19□□□□□ -0.3
ATRX-216ENST00000624403 PHKG2P15735 406 aa13.18□□□□□ -0.3
ATRX-216ENST00000624403 EVA1CP58658 441 aa13.18□□□□□ -0.3
ATRX-216ENST00000624403 TEFQ10587 303 aa13.18□□□□□ -0.3
ATRX-216ENST00000624403 MVPQ14764 893 aaKnown RBP13.18□□□□□ -0.3
ATRX-216ENST00000624403 LCE2DQ5TA82 110 aaPredicted RBP13.18□□□□□ -0.3
ATRX-216ENST00000624403 LARP1Q6PKG0 1096 aaKnown RBP13.18□□□□□ -0.3
ATRX-216ENST00000624403 C3orf67Q6ZVT6 689 aa13.18□□□□□ -0.3
ATRX-216ENST00000624403 ARHGAP45Q92619 1136 aa13.18□□□□□ -0.3
ATRX-216ENST00000624403 CARD10Q9BWT7 1032 aa13.18□□□□□ -0.3
ATRX-216ENST00000624403 STRN4Q9NRL3 753 aa13.18□□□□□ -0.3
ATRX-216ENST00000624403 UBAP1LF5GYI3 381 aa13.17□□□□□ -0.3
ATRX-216ENST00000624403 BOLA1Q9Y3E2 137 aa13.17□□□□□ -0.3
ATRX-216ENST00000624403 ADAMTS7Q9UKP4 1686 aa13.17□□□□□ -0.3
ATRX-216ENST00000624403 AAMPQ13685 434 aa13.16□□□□□ -0.3
ATRX-216ENST00000624403 IFNL2Q8IZJ0 200 aa13.16□□□□□ -0.3
ATRX-216ENST00000624403 TMEM57Q8N5G2 664 aa13.16□□□□□ -0.3
ATRX-216ENST00000624403 COL14A1Q05707 1796 aaKnown RBP13.16□□□□□ -0.3
ATRX-216ENST00000624403 PKD1L3Q7Z443 1732 aa13.16□□□□□ -0.3
ATRX-216ENST00000624403 SOS1Q07889 1333 aaPredicted RBP13.15□□□□□ -0.3
ATRX-216ENST00000624403 KDM2BQ8NHM5 1336 aa13.15□□□□□ -0.3
ATRX-216ENST00000624403 KDM6AO15550 1401 aaPredicted RBP13.15□□□□□ -0.3
ATRX-216ENST00000624403 BTBD11A6QL63 1104 aa13.15□□□□□ -0.3
ATRX-216ENST00000624403 CYP27B1O15528 508 aa13.15□□□□□ -0.3
ATRX-216ENST00000624403 ITPRIPQ8IWB1 547 aa13.15□□□□□ -0.3
ATRX-216ENST00000624403 MS4A4AQ96JQ5 239 aa13.15□□□□□ -0.3
ATRX-216ENST00000624403 API5Q9BZZ5 524 aaKnown RBP13.15□□□□□ -0.3
ATRX-216ENST00000624403 BTG4Q9NY30 223 aa13.15□□□□□ -0.3
ATRX-216ENST00000624403 KDM3BQ7LBC6 1761 aa13.15□□□□□ -0.31
ATRX-216ENST00000624403 KCNQ3O43525 872 aa13.14□□□□□ -0.31
ATRX-216ENST00000624403 EIF4A1P60842 406 aaKnown RBP13.14□□□□□ -0.31
ATRX-216ENST00000624403 CENPQQ7L2Z9 268 aaPredicted RBP13.14□□□□□ -0.31
ATRX-216ENST00000624403 DDX19BQ9UMR2 479 aa13.14□□□□□ -0.31
ATRX-216ENST00000624403 ABCC4O15439 1325 aa13.13□□□□□ -0.31
ATRX-216ENST00000624403 PARP4Q9UKK3 1724 aaKnown RBP13.13□□□□□ -0.31
ATRX-216ENST00000624403 IL2RBP14784 551 aa13.13□□□□□ -0.31
ATRX-216ENST00000624403 ZCRB1Q8TBF4 217 aaKnown RBP13.13□□□□□ -0.31
ATRX-216ENST00000624403 HSP90AB1P08238 724 aaKnown RBP13.12□□□□□ -0.31
ATRX-216ENST00000624403 CCDC30Q5VVM6 783 aa13.12□□□□□ -0.31
ATRX-216ENST00000624403 DCAF5Q96JK2 942 aa13.12□□□□□ -0.31
ATRX-216ENST00000624403 SLC52A2Q9HAB3 445 aa13.12□□□□□ -0.31
ATRX-216ENST00000624403 PCDHB15Q9Y5E8 787 aa13.12□□□□□ -0.31
ATRX-216ENST00000624403 SIPA1L3O60292 1781 aaPredicted RBP13.12□□□□□ -0.31
ATRX-216ENST00000624403 G3V3G9 751 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 ADAMTS2O95450 1211 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 IGHDP01880 384 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 G2E3Q7L622 706 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 STK31Q9BXU1 1019 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 RGS12O14924 1447 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 PTPRCP08575 1304 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 PCDH11XQ9BZA7 1347 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 PCDH11YQ9BZA8 1340 aa13.11□□□□□ -0.31
ATRX-216ENST00000624403 MRC1P22897 1456 aa13.1□□□□□ -0.31
ATRX-216ENST00000624403 SCN11AQ9UI33 1791 aa13.1□□□□□ -0.31
ATRX-216ENST00000624403 NUTM2BA6NNL0 878 aaPredicted RBP13.1□□□□□ -0.31
ATRX-216ENST00000624403 NUTM2EB1AL46 878 aaPredicted RBP13.1□□□□□ -0.31
ATRX-216ENST00000624403 HOXB7P09629 217 aa13.1□□□□□ -0.31
ATRX-216ENST00000624403 HDGFL1Q5TGJ6 251 aa13.1□□□□□ -0.31
ATRX-216ENST00000624403 NUTM2AQ8IVF1 878 aaPredicted RBP13.1□□□□□ -0.31
ATRX-216ENST00000624403 CERKQ8TCT0 537 aa13.1□□□□□ -0.31
ATRX-216ENST00000624403 NECTIN2Q92692 538 aa13.1□□□□□ -0.31
ATRX-216ENST00000624403 TSHZ2Q9NRE2 1034 aa13.1□□□□□ -0.31
ATRX-216ENST00000624403 VIRMAQ69YN4 1812 aaKnown RBP13.1□□□□□ -0.31
ATRX-216ENST00000624403 HEG1Q9ULI3 1381 aa13.09□□□□□ -0.31
ATRX-216ENST00000624403 NFATC2IPQ8NCF5 419 aa13.09□□□□□ -0.31
ATRX-216ENST00000624403 ZBTB40Q9NUA8 1239 aa13.09□□□□□ -0.31
ATRX-216ENST00000624403 USP35Q9P2H5 1018 aa13.09□□□□□ -0.31
ATRX-216ENST00000624403 DISP2A7MBM2 1401 aa13.08□□□□□ -0.32
ATRX-216ENST00000624403 ZBTB7BO15156 539 aaPredicted RBP13.08□□□□□ -0.32
ATRX-216ENST00000624403 NKX1-1Q15270 411 aaPredicted RBP13.08□□□□□ -0.32
ATRX-216ENST00000624403 INTS3Q68E01 1043 aaKnown RBP13.08□□□□□ -0.32
ATRX-216ENST00000624403 TMEM121BQ9BXQ6 578 aaPredicted RBP13.08□□□□□ -0.32
ATRX-216ENST00000624403 MFRPQ9BY79 579 aa13.08□□□□□ -0.32
ATRX-216ENST00000624403 PLCH1Q4KWH8 1693 aa13.08□□□□□ -0.32
ATRX-216ENST00000624403 GIGYF1O75420 1035 aaPredicted RBP13.07□□□□□ -0.32
ATRX-216ENST00000624403 EIF2S2P20042 333 aaKnown RBP13.07□□□□□ -0.32
ATRX-216ENST00000624403 CABP4P57796 275 aa13.07□□□□□ -0.32
ATRX-216ENST00000624403 SLC39A6Q13433 755 aa13.07□□□□□ -0.32
ATRX-216ENST00000624403 FBXO22Q8NEZ5 403 aa13.07□□□□□ -0.32
ATRX-216ENST00000624403 DDX54Q8TDD1 881 aaKnown RBP13.07□□□□□ -0.32
ATRX-216ENST00000624403 SHANK3Q9BYB0 1731 aa13.07□□□□□ -0.32
ATRX-216ENST00000624403 FLIIQ13045 1269 aa13.06□□□□□ -0.32
ATRX-216ENST00000624403 ZNF790Q6PG37 636 aa13.06□□□□□ -0.32
ATRX-216ENST00000624403 SKAP1Q86WV1 359 aa13.06□□□□□ -0.32
ATRX-216ENST00000624403 CHMP4AQ9BY43 222 aa13.06□□□□□ -0.32
ATRX-216ENST00000624403 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
ATRX-216ENST00000624403 RWDD1Q9H446 243 aaPredicted RBP13.06□□□□□ -0.32
ATRX-216ENST00000624403 JCADQ9P266 1359 aa13.06□□□□□ -0.32
ATRX-216ENST00000624403 NRAPQ86VF7 1730 aa13.05□□□□□ -0.32
ATRX-216ENST00000624403 ERVV-2B6SEH9 535 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms