RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 TRPA1O75762 1119 aa9.73□□□□□ -0.85
CDKL5-204ENST00000623364 FMR1Q06787 632 aaKnown RBP eCLIP9.73□□□□□ -0.85
CDKL5-204ENST00000623364 LINC00116Q8NCU8 138 aa9.73□□□□□ -0.85
CDKL5-204ENST00000623364 STXBP5LQ9Y2K9 1186 aa9.73□□□□□ -0.85
CDKL5-204ENST00000623364 ERBB4Q15303 1308 aa9.73□□□□□ -0.85
CDKL5-204ENST00000623364 GYS1P13807 737 aa9.72□□□□□ -0.85
CDKL5-204ENST00000623364 FBXO46Q6PJ61 603 aaPredicted RBP9.72□□□□□ -0.85
CDKL5-204ENST00000623364 CDK19Q9BWU1 502 aa9.72□□□□□ -0.85
CDKL5-204ENST00000623364 PIEZO1Q92508 2521 aa9.72□□□□□ -0.85
CDKL5-204ENST00000623364 KIAA0100Q14667 2235 aaKnown RBP9.71□□□□□ -0.85
CDKL5-204ENST00000623364 POTEFA5A3E0 1075 aa9.71□□□□□ -0.86
CDKL5-204ENST00000623364 INTS3Q68E01 1043 aaKnown RBP9.71□□□□□ -0.86
CDKL5-204ENST00000623364 RNF186Q9NXI6 227 aa9.71□□□□□ -0.86
CDKL5-204ENST00000623364 RTCBQ9Y3I0 505 aaKnown RBP9.71□□□□□ -0.86
CDKL5-204ENST00000623364 RFC4P35249 363 aa9.7□□□□□ -0.86
CDKL5-204ENST00000623364 MPRIPQ6WCQ1 1025 aa9.7□□□□□ -0.86
CDKL5-204ENST00000623364 ZCRB1Q8TBF4 217 aaKnown RBP9.7□□□□□ -0.86
CDKL5-204ENST00000623364 ZIC5Q96T25 663 aa9.7□□□□□ -0.86
CDKL5-204ENST00000623364 RANBP2P49792 3224 aaKnown RBP9.7□□□□□ -0.86
CDKL5-204ENST00000623364 TRAF5O00463 557 aa9.69□□□□□ -0.86
CDKL5-204ENST00000623364 ANKRD24Q8TF21 1146 aa9.69□□□□□ -0.86
CDKL5-204ENST00000623364 TAOK3Q9H2K8 898 aa9.69□□□□□ -0.86
CDKL5-204ENST00000623364 INSRP06213 1382 aa9.68□□□□□ -0.86
CDKL5-204ENST00000623364 LTBP3Q9NS15 1303 aa9.68□□□□□ -0.86
CDKL5-204ENST00000623364 LOC102724428A0A0B4J2F2 783 aa9.68□□□□□ -0.86
CDKL5-204ENST00000623364 PPEF1O14829 653 aaPredicted RBP9.68□□□□□ -0.86
CDKL5-204ENST00000623364 CELF2O95319 508 aaKnown RBP9.68□□□□□ -0.86
CDKL5-204ENST00000623364 SIK1P57059 783 aa9.68□□□□□ -0.86
CDKL5-204ENST00000623364 BICDL1Q6ZP65 573 aa9.68□□□□□ -0.86
CDKL5-204ENST00000623364 ARHGEF1Q92888 912 aaKnown RBP9.68□□□□□ -0.86
CDKL5-204ENST00000623364 AKAP11Q9UKA4 1901 aa9.68□□□□□ -0.86
CDKL5-204ENST00000623364 RNF123Q5XPI4 1314 aa9.67□□□□□ -0.86
CDKL5-204ENST00000623364 DEFB123Q8N688 67 aa9.67□□□□□ -0.86
CDKL5-204ENST00000623364 VCANP13611 3396 aa9.66□□□□□ -0.86
CDKL5-204ENST00000623364 DDR1Q08345 913 aa9.66□□□□□ -0.86
CDKL5-204ENST00000623364 SYNE4Q8N205 404 aa9.66□□□□□ -0.86
CDKL5-204ENST00000623364 LRCH3Q96II8 777 aa9.66□□□□□ -0.86
CDKL5-204ENST00000623364 SYNGAP1Q96PV0 1343 aa9.65□□□□□ -0.86
CDKL5-204ENST00000623364 FER1L6Q2WGJ9 1857 aa9.65□□□□□ -0.86
CDKL5-204ENST00000623364 TMEM265A0A087WTH1 108 aa9.64□□□□□ -0.87
CDKL5-204ENST00000623364 A0A1W2PPC1 479 aa9.64□□□□□ -0.87
CDKL5-204ENST00000623364 H0YIN7 160 aa9.64□□□□□ -0.87
CDKL5-204ENST00000623364 SOX1O00570 391 aaPredicted RBP9.64□□□□□ -0.87
CDKL5-204ENST00000623364 C21orf2O43822 256 aa9.64□□□□□ -0.87
CDKL5-204ENST00000623364 EN2P19622 333 aaPredicted RBP9.64□□□□□ -0.87
CDKL5-204ENST00000623364 ATP6V1AP38606 617 aa9.64□□□□□ -0.87
CDKL5-204ENST00000623364 KIF23Q02241 960 aaPredicted RBP9.64□□□□□ -0.87
CDKL5-204ENST00000623364 GPR153Q6NV75 609 aa9.64□□□□□ -0.87
CDKL5-204ENST00000623364 NFAT5O94916 1531 aa9.64□□□□□ -0.87
CDKL5-204ENST00000623364 DLEC1Q9Y238 1755 aa9.64□□□□□ -0.87
CDKL5-204ENST00000623364 SMG6Q86US8 1419 aaKnown RBP9.64□□□□□ -0.87
CDKL5-204ENST00000623364 LAMB4A4D0S4 1761 aa9.63□□□□□ -0.87
CDKL5-204ENST00000623364 PAPPA2Q9BXP8 1791 aa9.63□□□□□ -0.87
CDKL5-204ENST00000623364 ZNF541Q9H0D2 1346 aa9.63□□□□□ -0.87
CDKL5-204ENST00000623364 MAP3K12Q12852 859 aa9.63□□□□□ -0.87
CDKL5-204ENST00000623364 ITPK1Q13572 414 aa9.63□□□□□ -0.87
CDKL5-204ENST00000623364 C2CD5Q86YS7 1000 aa9.63□□□□□ -0.87
CDKL5-204ENST00000623364 ZNF296Q8WUU4 475 aaPredicted RBP9.63□□□□□ -0.87
CDKL5-204ENST00000623364 SYMPKQ92797 1274 aaKnown RBP9.63□□□□□ -0.87
CDKL5-204ENST00000623364 RBBP6Q7Z6E9 1792 aaKnown RBP9.63□□□□□ -0.87
CDKL5-204ENST00000623364 POLRMTO00411 1230 aaKnown RBP9.62□□□□□ -0.87
CDKL5-204ENST00000623364 LMOD1P29536 600 aaPredicted RBP9.62□□□□□ -0.87
CDKL5-204ENST00000623364 CCDC102AQ96A19 550 aa9.62□□□□□ -0.87
CDKL5-204ENST00000623364 ZNF408Q9H9D4 720 aa9.62□□□□□ -0.87
CDKL5-204ENST00000623364 SCN11AQ9UI33 1791 aa9.61□□□□□ -0.87
CDKL5-204ENST00000623364 HUNKP57058 714 aa9.61□□□□□ -0.87
CDKL5-204ENST00000623364 FKBP8Q14318 412 aa9.61□□□□□ -0.87
CDKL5-204ENST00000623364 GPC2Q8N158 579 aa9.61□□□□□ -0.87
CDKL5-204ENST00000623364 PRO3102Q9H379 93 aa9.61□□□□□ -0.87
CDKL5-204ENST00000623364 ADGRB1O14514 1584 aa9.61□□□□□ -0.87
CDKL5-204ENST00000623364 BRCA2P51587 3418 aa9.61□□□□□ -0.87
CDKL5-204ENST00000623364 USP31Q70CQ4 1352 aa9.61□□□□□ -0.87
CDKL5-204ENST00000623364 MAP2P11137 1827 aaKnown RBP9.61□□□□□ -0.87
CDKL5-204ENST00000623364 SPTBN5Q9NRC6 3674 aaKnown RBP9.6□□□□□ -0.87
CDKL5-204ENST00000623364 FAM155AB1AL88 458 aaPredicted RBP9.6□□□□□ -0.87
CDKL5-204ENST00000623364 SRPK2P78362 688 aaKnown RBP9.6□□□□□ -0.87
CDKL5-204ENST00000623364 REM2Q8IYK8 340 aaPredicted RBP9.6□□□□□ -0.87
CDKL5-204ENST00000623364 RPS6KA4O75676 772 aa9.59□□□□□ -0.87
CDKL5-204ENST00000623364 APLP2Q06481 763 aa9.59□□□□□ -0.87
CDKL5-204ENST00000623364 SOGA3Q5TF21 947 aa9.59□□□□□ -0.87
CDKL5-204ENST00000623364 RGMBQ6NW40 437 aa9.59□□□□□ -0.87
CDKL5-204ENST00000623364 USP50Q70EL3 339 aaPredicted RBP9.59□□□□□ -0.87
CDKL5-204ENST00000623364 PIGBQ92521 554 aa9.59□□□□□ -0.87
CDKL5-204ENST00000623364 ZNF622Q969S3 477 aaKnown RBP eCLIP9.59□□□□□ -0.87
CDKL5-204ENST00000623364 MTMR10Q9NXD2 777 aa9.59□□□□□ -0.87
CDKL5-204ENST00000623364 TNFRSF10AO00220 468 aa9.58□□□□□ -0.88
CDKL5-204ENST00000623364 RC3H1Q5TC82 1133 aaKnown RBP9.58□□□□□ -0.88
CDKL5-204ENST00000623364 Q7L0L9 218 aa9.58□□□□□ -0.88
CDKL5-204ENST00000623364 CSRNP1Q96S65 589 aa9.58□□□□□ -0.88
CDKL5-204ENST00000623364 TMEM106CQ9BVX2 250 aa9.58□□□□□ -0.88
CDKL5-204ENST00000623364 ARIH1Q9Y4X5 557 aaPredicted RBP9.58□□□□□ -0.88
CDKL5-204ENST00000623364 CACNA1GO43497 2377 aa9.58□□□□□ -0.88
CDKL5-204ENST00000623364 PKD1L2Q7Z442 2459 aa9.58□□□□□ -0.88
CDKL5-204ENST00000623364 CGNL1Q0VF96 1302 aa9.57□□□□□ -0.88
CDKL5-204ENST00000623364 TM4SF1P30408 202 aa9.57□□□□□ -0.88
CDKL5-204ENST00000623364 DPF3Q92784 378 aa9.57□□□□□ -0.88
CDKL5-204ENST00000623364 SLC4A1APQ9BWU0 796 aaKnown RBP9.57□□□□□ -0.88
CDKL5-204ENST00000623364 SRP68Q9UHB9 627 aaKnown RBP9.57□□□□□ -0.88
CDKL5-204ENST00000623364 FAM208AQ9UK61 1670 aaKnown RBP9.57□□□□□ -0.88
CDKL5-204ENST00000623364 ITGB4P16144 1822 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms