RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 FBXO3Q9UK99 471 aa8.91□□□□□ -0.98
CBWD3-219ENST00000622817 TNNQ9UQP3 1299 aa8.91□□□□□ -0.98
CBWD3-219ENST00000622817 PTPRCP08575 1304 aa8.91□□□□□ -0.98
CBWD3-219ENST00000622817 HDGFL1Q5TGJ6 251 aa8.9□□□□□ -0.98
CBWD3-219ENST00000622817 ZNF790Q6PG37 636 aa8.9□□□□□ -0.98
CBWD3-219ENST00000622817 BARGINQ6ZT62 677 aa8.9□□□□□ -0.98
CBWD3-219ENST00000622817 FNBP4Q8N3X1 1017 aaPredicted RBP8.9□□□□□ -0.98
CBWD3-219ENST00000622817 HEG1Q9ULI3 1381 aa8.9□□□□□ -0.99
CBWD3-219ENST00000622817 VPS72Q15906 364 aa8.89□□□□□ -0.99
CBWD3-219ENST00000622817 TTC5Q8N0Z6 440 aa8.89□□□□□ -0.99
CBWD3-219ENST00000622817 DDX19BQ9UMR2 479 aa8.89□□□□□ -0.99
CBWD3-219ENST00000622817 CCDC9Q9Y3X0 531 aaKnown RBP8.89□□□□□ -0.99
CBWD3-219ENST00000622817 SHANK3Q9BYB0 1731 aa8.89□□□□□ -0.99
CBWD3-219ENST00000622817 LRP6O75581 1613 aa8.89□□□□□ -0.99
CBWD3-219ENST00000622817 GIGYF1O75420 1035 aaPredicted RBP8.89□□□□□ -0.99
CBWD3-219ENST00000622817 MEX3CQ5U5Q3 659 aaKnown RBP8.89□□□□□ -0.99
CBWD3-219ENST00000622817 ITPRIPQ8IWB1 547 aa8.89□□□□□ -0.99
CBWD3-219ENST00000622817 CHMP4BQ9H444 224 aaKnown RBP8.89□□□□□ -0.99
CBWD3-219ENST00000622817 ABCC4O15439 1325 aa8.89□□□□□ -0.99
CBWD3-219ENST00000622817 TNS2Q63HR2 1409 aa8.88□□□□□ -0.99
CBWD3-219ENST00000622817 BCL9LQ86UU0 1499 aa8.88□□□□□ -0.99
CBWD3-219ENST00000622817 CLCN6P51797 869 aa8.88□□□□□ -0.99
CBWD3-219ENST00000622817 SLC39A6Q13433 755 aa8.88□□□□□ -0.99
CBWD3-219ENST00000622817 DDB1Q16531 1140 aa8.88□□□□□ -0.99
CBWD3-219ENST00000622817 TMEM57Q8N5G2 664 aa8.88□□□□□ -0.99
CBWD3-219ENST00000622817 WNK3Q9BYP7 1800 aa8.88□□□□□ -0.99
CBWD3-219ENST00000622817 EIF2S2P20042 333 aaKnown RBP8.87□□□□□ -0.99
CBWD3-219ENST00000622817 NECTIN2Q92692 538 aa8.87□□□□□ -0.99
CBWD3-219ENST00000622817 FMNL2Q96PY5 1086 aa8.87□□□□□ -0.99
CBWD3-219ENST00000622817 USP21Q9UK80 565 aa8.87□□□□□ -0.99
CBWD3-219ENST00000622817 CACNA1FO60840 1977 aa8.87□□□□□ -0.99
CBWD3-219ENST00000622817 SNRPA1P09661 255 aaKnown RBP8.87□□□□□ -0.99
CBWD3-219ENST00000622817 FLIIQ13045 1269 aa8.87□□□□□ -0.99
CBWD3-219ENST00000622817 ZNF496Q96IT1 587 aaPredicted RBP8.87□□□□□ -0.99
CBWD3-219ENST00000622817 TMOD3Q9NYL9 352 aa8.87□□□□□ -0.99
CBWD3-219ENST00000622817 INTS3Q68E01 1043 aaKnown RBP8.86□□□□□ -0.99
CBWD3-219ENST00000622817 G2E3Q7L622 706 aa8.86□□□□□ -0.99
CBWD3-219ENST00000622817 DBF4Q9UBU7 674 aaPredicted RBP8.86□□□□□ -0.99
CBWD3-219ENST00000622817 RGS12O14924 1447 aa8.86□□□□□ -0.99
CBWD3-219ENST00000622817 CENPQQ7L2Z9 268 aaPredicted RBP8.85□□□□□ -0.99
CBWD3-219ENST00000622817 CHPF2Q9P2E5 772 aa8.85□□□□□ -0.99
CBWD3-219ENST00000622817 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.85□□□□□ -0.99
CBWD3-219ENST00000622817 CCT4P50991 539 aaKnown RBP8.85□□□□□ -0.99
CBWD3-219ENST00000622817 FKBP5Q13451 457 aaPredicted RBP8.85□□□□□ -0.99
CBWD3-219ENST00000622817 FAM98CQ17RN3 349 aaKnown RBP8.85□□□□□ -0.99
CBWD3-219ENST00000622817 PIGBQ92521 554 aa8.85□□□□□ -0.99
CBWD3-219ENST00000622817 ZBTB40Q9NUA8 1239 aa8.85□□□□□ -0.99
CBWD3-219ENST00000622817 HYPKQ9NX55 129 aa8.85□□□□□ -0.99
CBWD3-219ENST00000622817 AFF2P51816 1311 aa8.84□□□□□ -0.99
CBWD3-219ENST00000622817 PRAMEF22A3QJZ6 481 aa8.84□□□□□ -0.99
CBWD3-219ENST00000622817 DDX21Q9NR30 783 aaKnown RBP eCLIP8.84□□□□□ -0.99
CBWD3-219ENST00000622817 TOGARAM1Q9Y4F4 1720 aa8.84□□□□□ -0.99
CBWD3-219ENST00000622817 KDM2BQ8NHM5 1336 aa8.83□□□□□ -1
CBWD3-219ENST00000622817 ZBTB7BO15156 539 aaPredicted RBP8.83□□□□□ -1
CBWD3-219ENST00000622817 MARCH10Q8NA82 808 aaPredicted RBP8.83□□□□□ -1
CBWD3-219ENST00000622817 RWDD1Q9H446 243 aaPredicted RBP8.83□□□□□ -1
CBWD3-219ENST00000622817 TRPC5Q9UL62 973 aaPredicted RBP8.83□□□□□ -1
CBWD3-219ENST00000622817 BCL9O00512 1426 aa8.83□□□□□ -1
CBWD3-219ENST00000622817 ERBB4Q15303 1308 aa8.83□□□□□ -1
CBWD3-219ENST00000622817 GJD4Q96KN9 370 aaPredicted RBP8.83□□□□□ -1
CBWD3-219ENST00000622817 PHAXQ9H814 394 aaKnown RBP8.83□□□□□ -1
CBWD3-219ENST00000622817 PCDHB15Q9Y5E8 787 aa8.83□□□□□ -1
CBWD3-219ENST00000622817 PAPPAQ13219 1627 aa8.82□□□□□ -1
CBWD3-219ENST00000622817 KCPQ6ZWJ8 1503 aa8.82□□□□□ -1
CBWD3-219ENST00000622817 UBR2Q8IWV8 1755 aa8.82□□□□□ -1
CBWD3-219ENST00000622817 F6X3S4 739 aa8.82□□□□□ -1
CBWD3-219ENST00000622817 PTCD1O75127 700 aaKnown RBP8.82□□□□□ -1
CBWD3-219ENST00000622817 PRIM1P49642 420 aaKnown RBP8.82□□□□□ -1
CBWD3-219ENST00000622817 PDIA6Q15084 440 aa8.82□□□□□ -1
CBWD3-219ENST00000622817 SLC4A10Q6U841 1118 aa8.82□□□□□ -1
CBWD3-219ENST00000622817 VSIG10Q8N0Z9 540 aa8.82□□□□□ -1
CBWD3-219ENST00000622817 TEX13AQ9BXU3 409 aaPredicted RBP8.82□□□□□ -1
CBWD3-219ENST00000622817 ATG3Q9NT62 314 aa8.82□□□□□ -1
CBWD3-219ENST00000622817 ASAP1Q9ULH1 1129 aa8.82□□□□□ -1
CBWD3-219ENST00000622817 USP16Q9Y5T5 823 aa8.82□□□□□ -1
CBWD3-219ENST00000622817 PXDNLA1KZ92 1463 aa8.82□□□□□ -1
CBWD3-219ENST00000622817 ATRNO75882 1429 aa8.82□□□□□ -1
CBWD3-219ENST00000622817 C5P01031 1676 aa8.81□□□□□ -1
CBWD3-219ENST00000622817 A0A0G2JS52 829 aa8.81□□□□□ -1
CBWD3-219ENST00000622817 DDX58O95786 925 aaKnown RBP8.81□□□□□ -1
CBWD3-219ENST00000622817 ANXA1P04083 346 aa8.81□□□□□ -1
CBWD3-219ENST00000622817 VASPP50552 380 aaPredicted RBP8.81□□□□□ -1
CBWD3-219ENST00000622817 MYT1Q01538 1121 aa8.81□□□□□ -1
CBWD3-219ENST00000622817 PROSER3Q2NL68 480 aa8.81□□□□□ -1
CBWD3-219ENST00000622817 SYTL4Q96C24 671 aaPredicted RBP8.81□□□□□ -1
CBWD3-219ENST00000622817 ITGB4P16144 1822 aa8.81□□□□□ -1
CBWD3-219ENST00000622817 GLI3P10071 1580 aa8.81□□□□□ -1
CBWD3-219ENST00000622817 PI4KAP2A4QPH2 592 aa8.81□□□□□ -1
CBWD3-219ENST00000622817 IGHDP01880 384 aa8.81□□□□□ -1
CBWD3-219ENST00000622817 POTEIP0CG38 1075 aa8.81□□□□□ -1
CBWD3-219ENST00000622817 HDAC1Q13547 482 aaPredicted RBP8.81□□□□□ -1
CBWD3-219ENST00000622817 KSR2Q6VAB6 950 aa8.81□□□□□ -1
CBWD3-219ENST00000622817 PLCD3Q8N3E9 789 aa8.81□□□□□ -1
CBWD3-219ENST00000622817 PI4KAP1Q8N8J0 262 aa8.81□□□□□ -1
CBWD3-219ENST00000622817 DNAAF4Q8WXU2 420 aa8.81□□□□□ -1
CBWD3-219ENST00000622817 PHF12Q96QT6 1004 aa8.81□□□□□ -1
CBWD3-219ENST00000622817 KAT6BQ8WYB5 2073 aa8.8□□□□□ -1
CBWD3-219ENST00000622817 ONECUT3O60422 494 aaPredicted RBP8.8□□□□□ -1
CBWD3-219ENST00000622817 MYL6BP14649 208 aa8.8□□□□□ -1
CBWD3-219ENST00000622817 QTRT2Q9H974 415 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms