RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 MYH14Q7Z406 1995 aaKnown RBP16.23■□□□□ 0.19
CBWD3-218ENST00000622755 ANP32CO43423 234 aa16.22■□□□□ 0.19
CBWD3-218ENST00000622755 SMIM5Q71RC9 77 aa16.22■□□□□ 0.19
CBWD3-218ENST00000622755 AMIGO3Q86WK7 504 aa16.22■□□□□ 0.19
CBWD3-218ENST00000622755 C4AP0C0L4 1744 aa16.22■□□□□ 0.19
CBWD3-218ENST00000622755 MMP10P09238 476 aa16.21■□□□□ 0.19
CBWD3-218ENST00000622755 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.19
CBWD3-218ENST00000622755 DCTN1Q14203 1278 aa16.21■□□□□ 0.19
CBWD3-218ENST00000622755 INTS5Q6P9B9 1019 aaKnown RBP16.21■□□□□ 0.19
CBWD3-218ENST00000622755 SNRPA1P09661 255 aaKnown RBP16.2■□□□□ 0.18
CBWD3-218ENST00000622755 RIPK4P57078 832 aa16.2■□□□□ 0.18
CBWD3-218ENST00000622755 ZNF330Q9Y3S2 320 aaPredicted RBP16.2■□□□□ 0.18
CBWD3-218ENST00000622755 SOS1Q07889 1333 aaPredicted RBP16.2■□□□□ 0.18
CBWD3-218ENST00000622755 USP42Q9H9J4 1324 aaKnown RBP16.2■□□□□ 0.18
CBWD3-218ENST00000622755 COL15A1P39059 1388 aa16.2■□□□□ 0.18
CBWD3-218ENST00000622755 GYS1P13807 737 aa16.19■□□□□ 0.18
CBWD3-218ENST00000622755 RUNDC1Q96C34 613 aa16.19■□□□□ 0.18
CBWD3-218ENST00000622755 ZBTB1Q9Y2K1 713 aa16.19■□□□□ 0.18
CBWD3-218ENST00000622755 NARFQ9UHQ1 456 aa16.18■□□□□ 0.18
CBWD3-218ENST00000622755 GRIN3BO60391 1043 aa16.17■□□□□ 0.18
CBWD3-218ENST00000622755 YY1P25490 414 aa16.17■□□□□ 0.18
CBWD3-218ENST00000622755 IL6STP40189 918 aaPredicted RBP16.17■□□□□ 0.18
CBWD3-218ENST00000622755 TMPOP42166 694 aaKnown RBP16.17■□□□□ 0.18
CBWD3-218ENST00000622755 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
CBWD3-218ENST00000622755 CCDC146Q8IYE0 955 aa16.17■□□□□ 0.18
CBWD3-218ENST00000622755 NEUROD2Q15784 382 aa16.16■□□□□ 0.18
CBWD3-218ENST00000622755 NLGN2Q8NFZ4 835 aa16.16■□□□□ 0.18
CBWD3-218ENST00000622755 SRP68Q9UHB9 627 aaKnown RBP16.16■□□□□ 0.18
CBWD3-218ENST00000622755 TSPYL4Q9UJ04 414 aa16.15■□□□□ 0.18
CBWD3-218ENST00000622755 ADAMTS8Q9UP79 889 aa16.15■□□□□ 0.18
CBWD3-218ENST00000622755 NPHP1O15259 732 aa16.14■□□□□ 0.17
CBWD3-218ENST00000622755 KCNQ3O43525 872 aa16.14■□□□□ 0.17
CBWD3-218ENST00000622755 TGFB2P61812 414 aa16.14■□□□□ 0.17
CBWD3-218ENST00000622755 BABAM1Q9NWV8 329 aa16.14■□□□□ 0.17
CBWD3-218ENST00000622755 EIF5P55010 431 aaKnown RBP16.13■□□□□ 0.17
CBWD3-218ENST00000622755 CALD1Q05682 793 aaKnown RBP16.13■□□□□ 0.17
CBWD3-218ENST00000622755 FKBP8Q14318 412 aa16.13■□□□□ 0.17
CBWD3-218ENST00000622755 ZNF652Q9Y2D9 606 aa16.13■□□□□ 0.17
CBWD3-218ENST00000622755 KDM3BQ7LBC6 1761 aa16.13■□□□□ 0.17
CBWD3-218ENST00000622755 LAMB4A4D0S4 1761 aa16.13■□□□□ 0.17
CBWD3-218ENST00000622755 CHD4Q14839 1912 aa16.13■□□□□ 0.17
CBWD3-218ENST00000622755 A1BGP04217 495 aa16.12■□□□□ 0.17
CBWD3-218ENST00000622755 THUMPD2Q9BTF0 503 aaKnown RBP16.12■□□□□ 0.17
CBWD3-218ENST00000622755 MIS18AQ9NYP9 233 aa16.12■□□□□ 0.17
CBWD3-218ENST00000622755 RRP7AQ9Y3A4 280 aaKnown RBP16.12■□□□□ 0.17
CBWD3-218ENST00000622755 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
CBWD3-218ENST00000622755 USP16Q9Y5T5 823 aa16.11■□□□□ 0.17
CBWD3-218ENST00000622755 MRS2Q9HD23 443 aa16.11■□□□□ 0.17
CBWD3-218ENST00000622755 LAS1LQ9Y4W2 734 aaKnown RBP16.11■□□□□ 0.17
CBWD3-218ENST00000622755 KIF13BQ9NQT8 1826 aa16.1■□□□□ 0.17
CBWD3-218ENST00000622755 C10orf71Q711Q0 1435 aa16.1■□□□□ 0.17
CBWD3-218ENST00000622755 TBC1D2BQ9UPU7 963 aa16.1■□□□□ 0.17
CBWD3-218ENST00000622755 TM4SF1P30408 202 aa16.09■□□□□ 0.17
CBWD3-218ENST00000622755 EIF4A1P60842 406 aaKnown RBP16.09■□□□□ 0.17
CBWD3-218ENST00000622755 BICDL1Q6ZP65 573 aa16.09■□□□□ 0.17
CBWD3-218ENST00000622755 SCN7AQ01118 1682 aa16.09■□□□□ 0.17
CBWD3-218ENST00000622755 POLRMTO00411 1230 aaKnown RBP16.08■□□□□ 0.16
CBWD3-218ENST00000622755 GIGYF1O75420 1035 aaPredicted RBP16.08■□□□□ 0.16
CBWD3-218ENST00000622755 SERPINB2P05120 415 aa16.08■□□□□ 0.16
CBWD3-218ENST00000622755 NFIXQ14938 502 aa16.08■□□□□ 0.16
CBWD3-218ENST00000622755 SETDB2Q96T68 719 aa16.08■□□□□ 0.16
CBWD3-218ENST00000622755 CARMIL3Q8ND23 1372 aa16.07■□□□□ 0.16
CBWD3-218ENST00000622755 PRAMEF22A3QJZ6 481 aa16.07■□□□□ 0.16
CBWD3-218ENST00000622755 DDR1Q08345 913 aa16.07■□□□□ 0.16
CBWD3-218ENST00000622755 KIF6Q6ZMV9 814 aa16.07■□□□□ 0.16
CBWD3-218ENST00000622755 ERBB4Q15303 1308 aa16.07■□□□□ 0.16
CBWD3-218ENST00000622755 APAF1O14727 1248 aa16.06■□□□□ 0.16
CBWD3-218ENST00000622755 CLEC4GQ6UXB4 293 aa16.06■□□□□ 0.16
CBWD3-218ENST00000622755 PIM2Q9P1W9 311 aa16.06■□□□□ 0.16
CBWD3-218ENST00000622755 PDZRN3Q9UPQ7 1066 aa16.06■□□□□ 0.16
CBWD3-218ENST00000622755 N4BP2Q86UW6 1770 aaPredicted RBP16.05■□□□□ 0.16
CBWD3-218ENST00000622755 A0A0G2JLW4 131 aa16.05■□□□□ 0.16
CBWD3-218ENST00000622755 RGL2O15211 777 aa16.05■□□□□ 0.16
CBWD3-218ENST00000622755 ST5P78524 1137 aa16.05■□□□□ 0.16
CBWD3-218ENST00000622755 BCS1LQ9Y276 419 aa16.05■□□□□ 0.16
CBWD3-218ENST00000622755 PXDNLA1KZ92 1463 aa16.05■□□□□ 0.16
CBWD3-218ENST00000622755 BCORQ6W2J9 1755 aa16.05■□□□□ 0.16
CBWD3-218ENST00000622755 CAMTA2O94983 1202 aa16.04■□□□□ 0.16
CBWD3-218ENST00000622755 YBX3P16989 372 aaKnown RBP eCLIP16.04■□□□□ 0.16
CBWD3-218ENST00000622755 PIP4K2AP48426 406 aaPredicted RBP16.04■□□□□ 0.16
CBWD3-218ENST00000622755 TBC1D9BQ66K14 1250 aa16.04■□□□□ 0.16
CBWD3-218ENST00000622755 NGEFQ8N5V2 710 aa16.04■□□□□ 0.16
CBWD3-218ENST00000622755 CHMP4AQ9BY43 222 aa16.04■□□□□ 0.16
CBWD3-218ENST00000622755 WWC3Q9ULE0 1092 aa16.04■□□□□ 0.16
CBWD3-218ENST00000622755 MYL6BP14649 208 aa16.03■□□□□ 0.16
CBWD3-218ENST00000622755 DPEP1P16444 411 aa16.03■□□□□ 0.16
CBWD3-218ENST00000622755 EIF2S2P20042 333 aaKnown RBP16.03■□□□□ 0.16
CBWD3-218ENST00000622755 GNAI1P63096 354 aa16.03■□□□□ 0.16
CBWD3-218ENST00000622755 CNBD1Q8NA66 436 aa16.03■□□□□ 0.16
CBWD3-218ENST00000622755 CFAP44Q96MT7 982 aa16.03■□□□□ 0.16
CBWD3-218ENST00000622755 BCL2L12Q9HB09 334 aa16.03■□□□□ 0.16
CBWD3-218ENST00000622755 TRIM35Q9UPQ4 493 aa16.03■□□□□ 0.16
CBWD3-218ENST00000622755 AFDNP55196 1824 aaKnown RBP16.03■□□□□ 0.16
CBWD3-218ENST00000622755 H0YIN7 160 aa16.02■□□□□ 0.16
CBWD3-218ENST00000622755 GTF2E1P29083 439 aaPredicted RBP16.02■□□□□ 0.16
CBWD3-218ENST00000622755 PDE6BP35913 854 aa16.02■□□□□ 0.16
CBWD3-218ENST00000622755 DALRD3Q5D0E6 543 aaKnown RBP16.02■□□□□ 0.16
CBWD3-218ENST00000622755 NBPF26B4DH59 902 aa16.02■□□□□ 0.15
CBWD3-218ENST00000622755 CHL1O00533 1208 aa16.02■□□□□ 0.15
CBWD3-218ENST00000622755 NBPF10Q6P3W6 841 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms