RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 MTX1Q13505 466 aa11.55□□□□□ -0.56
PDPN-212ENST00000621990 TSHZ3Q63HK5 1081 aa11.55□□□□□ -0.56
PDPN-212ENST00000621990 PPP1R42Q7Z4L9 355 aa11.55□□□□□ -0.56
PDPN-212ENST00000621990 PI4KAP2A4QPH2 592 aa11.55□□□□□ -0.56
PDPN-212ENST00000621990 SSFA2P28290 1259 aa11.55□□□□□ -0.56
PDPN-212ENST00000621990 NUCB2P80303 420 aa11.55□□□□□ -0.56
PDPN-212ENST00000621990 MPRIPQ6WCQ1 1025 aa11.55□□□□□ -0.56
PDPN-212ENST00000621990 PI4KAP1Q8N8J0 262 aa11.55□□□□□ -0.56
PDPN-212ENST00000621990 DBF4Q9UBU7 674 aaPredicted RBP11.55□□□□□ -0.56
PDPN-212ENST00000621990 SCN11AQ9UI33 1791 aa11.54□□□□□ -0.56
PDPN-212ENST00000621990 GIGYF1O75420 1035 aaPredicted RBP11.54□□□□□ -0.56
PDPN-212ENST00000621990 NBPF7P0C2Y1 421 aaPredicted RBP11.54□□□□□ -0.56
PDPN-212ENST00000621990 XRCC6P12956 609 aaKnown RBP eCLIP11.54□□□□□ -0.56
PDPN-212ENST00000621990 EIF2S2P20042 333 aaKnown RBP11.54□□□□□ -0.56
PDPN-212ENST00000621990 C1orf141Q5JVX7 400 aa11.54□□□□□ -0.56
PDPN-212ENST00000621990 FOXD4L1Q9NU39 408 aa11.54□□□□□ -0.56
PDPN-212ENST00000621990 COL18A1P39060 1754 aa11.54□□□□□ -0.56
PDPN-212ENST00000621990 USP42Q9H9J4 1324 aaKnown RBP11.54□□□□□ -0.56
PDPN-212ENST00000621990 AXIN2Q9Y2T1 843 aa11.54□□□□□ -0.56
PDPN-212ENST00000621990 DCCP43146 1447 aa11.53□□□□□ -0.56
PDPN-212ENST00000621990 KRT28Q7Z3Y7 464 aa11.53□□□□□ -0.56
PDPN-212ENST00000621990 PI4K2BQ8TCG2 481 aa11.53□□□□□ -0.56
PDPN-212ENST00000621990 GZF1Q9H116 711 aaPredicted RBP11.53□□□□□ -0.56
PDPN-212ENST00000621990 ERBB3P21860 1342 aa11.53□□□□□ -0.56
PDPN-212ENST00000621990 ALDH1L1O75891 902 aa11.53□□□□□ -0.56
PDPN-212ENST00000621990 RHPN1Q8TCX5 695 aa11.53□□□□□ -0.56
PDPN-212ENST00000621990 KIF1BPQ96EK5 621 aa11.53□□□□□ -0.56
PDPN-212ENST00000621990 SRGAP3O43295 1099 aa11.52□□□□□ -0.56
PDPN-212ENST00000621990 BAG4O95429 457 aaKnown RBP11.52□□□□□ -0.56
PDPN-212ENST00000621990 MCM2P49736 904 aa11.52□□□□□ -0.56
PDPN-212ENST00000621990 MRE11P49959 708 aa11.52□□□□□ -0.56
PDPN-212ENST00000621990 XPCQ01831 940 aaPredicted RBP11.52□□□□□ -0.56
PDPN-212ENST00000621990 UNC5CLQ8IV45 518 aa11.52□□□□□ -0.56
PDPN-212ENST00000621990 C19orf44Q9H6X5 657 aa11.52□□□□□ -0.56
PDPN-212ENST00000621990 SURF6O75683 361 aaKnown RBP11.52□□□□□ -0.57
PDPN-212ENST00000621990 HSP90AB4PQ58FF6 505 aa11.52□□□□□ -0.57
PDPN-212ENST00000621990 FAM43AQ8N2R8 423 aa11.52□□□□□ -0.57
PDPN-212ENST00000621990 ZBTB7CA1YPR0 619 aa11.51□□□□□ -0.57
PDPN-212ENST00000621990 C5P01031 1676 aa11.51□□□□□ -0.57
PDPN-212ENST00000621990 UTYO14607 1347 aa11.51□□□□□ -0.57
PDPN-212ENST00000621990 MRC1P22897 1456 aa11.51□□□□□ -0.57
PDPN-212ENST00000621990 MCCP23508 829 aa11.51□□□□□ -0.57
PDPN-212ENST00000621990 KSR2Q6VAB6 950 aa11.51□□□□□ -0.57
PDPN-212ENST00000621990 IL1RAPL2Q9NP60 686 aa11.51□□□□□ -0.57
PDPN-212ENST00000621990 TRIM6-TRIM34B2RNG4 842 aa11.51□□□□□ -0.57
PDPN-212ENST00000621990 GOLGA6L22H0YM25 854 aa11.51□□□□□ -0.57
PDPN-212ENST00000621990 KLHL40Q2TBA0 621 aa11.51□□□□□ -0.57
PDPN-212ENST00000621990 RILPL2Q969X0 211 aa11.51□□□□□ -0.57
PDPN-212ENST00000621990 HYPKQ9NX55 129 aa11.51□□□□□ -0.57
PDPN-212ENST00000621990 STRCP1A6NGW2 1772 aa11.5□□□□□ -0.57
PDPN-212ENST00000621990 CUL4AQ13619 759 aa11.5□□□□□ -0.57
PDPN-212ENST00000621990 PROSER3Q2NL68 480 aa11.5□□□□□ -0.57
PDPN-212ENST00000621990 PROSER2Q86WR7 435 aaPredicted RBP11.5□□□□□ -0.57
PDPN-212ENST00000621990 PALD1Q9ULE6 856 aa11.5□□□□□ -0.57
PDPN-212ENST00000621990 KDM6AO15550 1401 aaPredicted RBP11.5□□□□□ -0.57
PDPN-212ENST00000621990 PKD1L3Q7Z443 1732 aa11.5□□□□□ -0.57
PDPN-212ENST00000621990 NUTM1Q86Y26 1132 aa11.5□□□□□ -0.57
PDPN-212ENST00000621990 ZGPATQ8N5A5 531 aaKnown RBP11.5□□□□□ -0.57
PDPN-212ENST00000621990 MAP3K2Q9Y2U5 619 aa11.5□□□□□ -0.57
PDPN-212ENST00000621990 TTC41PQ6P2S7 1318 aa11.49□□□□□ -0.57
PDPN-212ENST00000621990 ANXA1P04083 346 aa11.49□□□□□ -0.57
PDPN-212ENST00000621990 HSPA4P34932 840 aa11.49□□□□□ -0.57
PDPN-212ENST00000621990 NEK4P51957 841 aa11.49□□□□□ -0.57
PDPN-212ENST00000621990 TMX3Q96JJ7 454 aa11.49□□□□□ -0.57
PDPN-212ENST00000621990 GRPEL1Q9HAV7 217 aa11.49□□□□□ -0.57
PDPN-212ENST00000621990 ANO2Q9NQ90 1003 aa11.49□□□□□ -0.57
PDPN-212ENST00000621990 RTN4Q9NQC3 1192 aaKnown RBP11.49□□□□□ -0.57
PDPN-212ENST00000621990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.49□□□□□ -0.57
PDPN-212ENST00000621990 HDAC5Q9UQL6 1122 aa11.49□□□□□ -0.57
PDPN-212ENST00000621990 ZDHHC9Q9Y397 364 aa11.49□□□□□ -0.57
PDPN-212ENST00000621990 PKP1Q13835 747 aa11.49□□□□□ -0.57
PDPN-212ENST00000621990 PDIA6Q15084 440 aa11.49□□□□□ -0.57
PDPN-212ENST00000621990 INTS4Q96HW7 963 aaKnown RBP11.49□□□□□ -0.57
PDPN-212ENST00000621990 IL25Q9H293 177 aa11.49□□□□□ -0.57
PDPN-212ENST00000621990 DDX21Q9NR30 783 aaKnown RBP eCLIP11.49□□□□□ -0.57
PDPN-212ENST00000621990 LINS1Q8NG48 757 aa11.48□□□□□ -0.57
PDPN-212ENST00000621990 PARP4Q9UKK3 1724 aaKnown RBP11.48□□□□□ -0.57
PDPN-212ENST00000621990 SGSM2O43147 1006 aa11.48□□□□□ -0.57
PDPN-212ENST00000621990 NPHP3Q7Z494 1330 aa11.48□□□□□ -0.57
PDPN-212ENST00000621990 RAD50Q92878 1312 aa11.48□□□□□ -0.57
PDPN-212ENST00000621990 MEGF6O75095 1541 aa11.47□□□□□ -0.57
PDPN-212ENST00000621990 PRAMEF22A3QJZ6 481 aa11.47□□□□□ -0.57
PDPN-212ENST00000621990 PANK2Q9BZ23 570 aa11.47□□□□□ -0.57
PDPN-212ENST00000621990 LMOD2Q6P5Q4 547 aa11.47□□□□□ -0.57
PDPN-212ENST00000621990 GAS2L3Q86XJ1 694 aa11.47□□□□□ -0.57
PDPN-212ENST00000621990 ERC1Q8IUD2 1116 aa11.47□□□□□ -0.57
PDPN-212ENST00000621990 CNTROBQ8N137 903 aa11.47□□□□□ -0.57
PDPN-212ENST00000621990 SLC52A2Q9HAB3 445 aa11.47□□□□□ -0.57
PDPN-212ENST00000621990 LMBRD1Q9NUN5 540 aa11.47□□□□□ -0.57
PDPN-212ENST00000621990 GLRX3O76003 335 aaKnown RBP11.46□□□□□ -0.57
PDPN-212ENST00000621990 ZNF790Q6PG37 636 aa11.46□□□□□ -0.57
PDPN-212ENST00000621990 GRM8O00222 908 aa11.46□□□□□ -0.58
PDPN-212ENST00000621990 PLEKHG5O94827 1062 aa11.46□□□□□ -0.58
PDPN-212ENST00000621990 DDX58O95786 925 aaKnown RBP11.46□□□□□ -0.58
PDPN-212ENST00000621990 PHKG2P15735 406 aa11.46□□□□□ -0.58
PDPN-212ENST00000621990 KAZALD1Q96I82 304 aa11.46□□□□□ -0.58
PDPN-212ENST00000621990 LSG1Q9H089 658 aaKnown RBP11.46□□□□□ -0.58
PDPN-212ENST00000621990 C9orf78Q9NZ63 289 aaPredicted RBP11.46□□□□□ -0.58
PDPN-212ENST00000621990 GLI3P10071 1580 aa11.46□□□□□ -0.58
PDPN-212ENST00000621990 TMEM94Q12767 1356 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms