RNA–Protein interactions for RNA: ENST00000621936.1

PCCA-210, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

Gene PCCA, Length 1,850 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-210ENST00000621936 BEND3Q5T5X7 828 aa14.29□□□□□ -0.12
PCCA-210ENST00000621936 USHBP1Q8N6Y0 703 aa14.29□□□□□ -0.12
PCCA-210ENST00000621936 KIF1BPQ96EK5 621 aa14.29□□□□□ -0.12
PCCA-210ENST00000621936 APBB1O00213 710 aa14.29□□□□□ -0.12
PCCA-210ENST00000621936 RNMTO43148 476 aaKnown RBP14.29□□□□□ -0.12
PCCA-210ENST00000621936 SSFA2P28290 1259 aa14.29□□□□□ -0.12
PCCA-210ENST00000621936 CUL4AQ13619 759 aa14.29□□□□□ -0.12
PCCA-210ENST00000621936 INTS4Q96HW7 963 aaKnown RBP14.29□□□□□ -0.12
PCCA-210ENST00000621936 DBF4Q9UBU7 674 aaPredicted RBP14.29□□□□□ -0.12
PCCA-210ENST00000621936 DCCP43146 1447 aa14.29□□□□□ -0.12
PCCA-210ENST00000621936 C1orf141Q5JVX7 400 aa14.28□□□□□ -0.12
PCCA-210ENST00000621936 ZNF530Q6P9A1 599 aaPredicted RBP14.28□□□□□ -0.12
PCCA-210ENST00000621936 GRPEL1Q9HAV7 217 aa14.28□□□□□ -0.12
PCCA-210ENST00000621936 BTBD11A6QL63 1104 aa14.27□□□□□ -0.12
PCCA-210ENST00000621936 PHAXQ9H814 394 aaKnown RBP14.27□□□□□ -0.12
PCCA-210ENST00000621936 LGR6Q9HBX8 967 aa14.27□□□□□ -0.12
PCCA-210ENST00000621936 SIPA1L3O60292 1781 aaPredicted RBP14.27□□□□□ -0.12
PCCA-210ENST00000621936 TTC41PQ6P2S7 1318 aa14.27□□□□□ -0.12
PCCA-210ENST00000621936 ZBTB7CA1YPR0 619 aa14.27□□□□□ -0.13
PCCA-210ENST00000621936 PPP1R42Q7Z4L9 355 aa14.27□□□□□ -0.13
PCCA-210ENST00000621936 ANKRD24Q8TF21 1146 aa14.27□□□□□ -0.13
PCCA-210ENST00000621936 CRYBG1Q9Y4K1 1723 aa14.26□□□□□ -0.13
PCCA-210ENST00000621936 RGPD2P0DJD1 1756 aa14.26□□□□□ -0.13
PCCA-210ENST00000621936 RHPN1Q8TCX5 695 aa14.26□□□□□ -0.13
PCCA-210ENST00000621936 ATF3P18847 181 aa14.25□□□□□ -0.13
PCCA-210ENST00000621936 GZF1Q9H116 711 aaPredicted RBP14.25□□□□□ -0.13
PCCA-210ENST00000621936 HYPKQ9NX55 129 aa14.25□□□□□ -0.13
PCCA-210ENST00000621936 SURF6O75683 361 aaKnown RBP14.25□□□□□ -0.13
PCCA-210ENST00000621936 ERC1Q8IUD2 1116 aa14.25□□□□□ -0.13
PCCA-210ENST00000621936 NECTIN2Q92692 538 aa14.25□□□□□ -0.13
PCCA-210ENST00000621936 CHPF2Q9P2E5 772 aa14.25□□□□□ -0.13
PCCA-210ENST00000621936 ALS2Q96Q42 1657 aa14.24□□□□□ -0.13
PCCA-210ENST00000621936 ADCY9O60503 1353 aa14.24□□□□□ -0.13
PCCA-210ENST00000621936 PI4KAP2A4QPH2 592 aa14.24□□□□□ -0.13
PCCA-210ENST00000621936 TRIM6-TRIM34B2RNG4 842 aa14.24□□□□□ -0.13
PCCA-210ENST00000621936 GIGYF1O75420 1035 aaPredicted RBP14.24□□□□□ -0.13
PCCA-210ENST00000621936 ZNF445P59923 1031 aa14.24□□□□□ -0.13
PCCA-210ENST00000621936 LMOD2Q6P5Q4 547 aa14.24□□□□□ -0.13
PCCA-210ENST00000621936 KSR2Q6VAB6 950 aa14.24□□□□□ -0.13
PCCA-210ENST00000621936 PI4KAP1Q8N8J0 262 aa14.24□□□□□ -0.13
PCCA-210ENST00000621936 PI4K2BQ8TCG2 481 aa14.24□□□□□ -0.13
PCCA-210ENST00000621936 LRRC59Q96AG4 307 aaKnown RBP14.24□□□□□ -0.13
PCCA-210ENST00000621936 UTYO14607 1347 aa14.24□□□□□ -0.13
PCCA-210ENST00000621936 HSPA4P34932 840 aa14.23□□□□□ -0.13
PCCA-210ENST00000621936 CNTROBQ8N137 903 aa14.23□□□□□ -0.13
PCCA-210ENST00000621936 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
PCCA-210ENST00000621936 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.23□□□□□ -0.13
PCCA-210ENST00000621936 SRGAP3O43295 1099 aa14.23□□□□□ -0.13
PCCA-210ENST00000621936 PLEKHG5O94827 1062 aa14.23□□□□□ -0.13
PCCA-210ENST00000621936 EIF2S2P20042 333 aaKnown RBP14.23□□□□□ -0.13
PCCA-210ENST00000621936 NEK4P51957 841 aa14.23□□□□□ -0.13
PCCA-210ENST00000621936 RILPL2Q969X0 211 aa14.23□□□□□ -0.13
PCCA-210ENST00000621936 TMX3Q96JJ7 454 aa14.23□□□□□ -0.13
PCCA-210ENST00000621936 LMBRD1Q9NUN5 540 aa14.23□□□□□ -0.13
PCCA-210ENST00000621936 GLRX3O76003 335 aaKnown RBP14.22□□□□□ -0.13
PCCA-210ENST00000621936 DDX58O95786 925 aaKnown RBP14.22□□□□□ -0.13
PCCA-210ENST00000621936 XPCQ01831 940 aaPredicted RBP14.22□□□□□ -0.13
PCCA-210ENST00000621936 DDX49Q9Y6V7 483 aaKnown RBP14.22□□□□□ -0.13
PCCA-210ENST00000621936 SGSM2O43147 1006 aa14.21□□□□□ -0.13
PCCA-210ENST00000621936 NBPF7P0C2Y1 421 aaPredicted RBP14.21□□□□□ -0.13
PCCA-210ENST00000621936 ANO2Q9NQ90 1003 aa14.21□□□□□ -0.13
PCCA-210ENST00000621936 DDX21Q9NR30 783 aaKnown RBP eCLIP14.21□□□□□ -0.13
PCCA-210ENST00000621936 AK9Q5TCS8 1911 aa14.21□□□□□ -0.13
PCCA-210ENST00000621936 CADPS2Q86UW7 1296 aa14.21□□□□□ -0.14
PCCA-210ENST00000621936 KLHL34Q8N239 644 aa14.21□□□□□ -0.14
PCCA-210ENST00000621936 LINS1Q8NG48 757 aa14.21□□□□□ -0.14
PCCA-210ENST00000621936 RUFY2Q8WXA3 655 aa14.21□□□□□ -0.14
PCCA-210ENST00000621936 PXDNQ92626 1479 aa14.2□□□□□ -0.14
PCCA-210ENST00000621936 NPHP3Q7Z494 1330 aa14.2□□□□□ -0.14
PCCA-210ENST00000621936 RAD50Q92878 1312 aa14.2□□□□□ -0.14
PCCA-210ENST00000621936 KCNQ3O43525 872 aa14.2□□□□□ -0.14
PCCA-210ENST00000621936 BRD1O95696 1058 aa14.2□□□□□ -0.14
PCCA-210ENST00000621936 MPRIPQ6WCQ1 1025 aa14.2□□□□□ -0.14
PCCA-210ENST00000621936 GPATCH3Q96I76 525 aa14.2□□□□□ -0.14
PCCA-210ENST00000621936 RTN4Q9NQC3 1192 aaKnown RBP14.2□□□□□ -0.14
PCCA-210ENST00000621936 ZDHHC9Q9Y397 364 aa14.2□□□□□ -0.14
PCCA-210ENST00000621936 TMEM94Q12767 1356 aa14.19□□□□□ -0.14
PCCA-210ENST00000621936 ERBB3P21860 1342 aa14.19□□□□□ -0.14
PCCA-210ENST00000621936 POTEDQ86YR6 584 aa14.19□□□□□ -0.14
PCCA-210ENST00000621936 CLASRPQ8N2M8 674 aaKnown RBP14.19□□□□□ -0.14
PCCA-210ENST00000621936 MBD3O95983 291 aa14.18□□□□□ -0.14
PCCA-210ENST00000621936 MCTP1Q6DN14 999 aa14.18□□□□□ -0.14
PCCA-210ENST00000621936 UNC5CLQ8IV45 518 aa14.18□□□□□ -0.14
PCCA-210ENST00000621936 ZGPATQ8N5A5 531 aaKnown RBP14.18□□□□□ -0.14
PCCA-210ENST00000621936 RAPGEF4Q8WZA2 1011 aa14.18□□□□□ -0.14
PCCA-210ENST00000621936 IL1RAPL2Q9NP60 686 aa14.18□□□□□ -0.14
PCCA-210ENST00000621936 SCN11AQ9UI33 1791 aa14.18□□□□□ -0.14
PCCA-210ENST00000621936 HIP1O00291 1037 aa14.18□□□□□ -0.14
PCCA-210ENST00000621936 TSHZ3Q63HK5 1081 aa14.18□□□□□ -0.14
PCCA-210ENST00000621936 GAS2L3Q86XJ1 694 aa14.18□□□□□ -0.14
PCCA-210ENST00000621936 NUTM1Q86Y26 1132 aa14.18□□□□□ -0.14
PCCA-210ENST00000621936 KCNB2Q92953 911 aa14.18□□□□□ -0.14
PCCA-210ENST00000621936 PPP1R9BQ96SB3 815 aa14.18□□□□□ -0.14
PCCA-210ENST00000621936 PALD1Q9ULE6 856 aa14.18□□□□□ -0.14
PCCA-210ENST00000621936 SPG7Q9UQ90 795 aa14.18□□□□□ -0.14
PCCA-210ENST00000621936 AXIN2Q9Y2T1 843 aa14.18□□□□□ -0.14
PCCA-210ENST00000621936 MAP3K2Q9Y2U5 619 aa14.18□□□□□ -0.14
PCCA-210ENST00000621936 COL15A1P39059 1388 aa14.17□□□□□ -0.14
PCCA-210ENST00000621936 TATP17735 454 aaPredicted RBP14.17□□□□□ -0.14
PCCA-210ENST00000621936 CLCN1P35523 988 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms