RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 TXLNAP40222 546 aa9.32□□□□□ -0.92
BRCA1-229ENST00000621897 PTK7Q13308 1070 aa9.32□□□□□ -0.92
BRCA1-229ENST00000621897 FOXR1Q6PIV2 292 aa9.32□□□□□ -0.92
BRCA1-229ENST00000621897 PGBD3Q8N328 593 aa9.32□□□□□ -0.92
BRCA1-229ENST00000621897 USP17L15C9J2P7 530 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 USP17L10C9JJH3 530 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 USP17L13C9JLJ4 530 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 USP17L12C9JPN9 530 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 USP17L11C9JVI0 530 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 USP17L21D6R901 530 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 USP17L18D6R9N7 530 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 USP17L22D6RA61 530 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 USP17L17D6RBQ6 530 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 USP17L19D6RCP7 530 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 USP17L20D6RJB6 530 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 M0R2N6 131 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 USP17L24Q0WX57 530 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 ZNF385CQ66K41 422 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-229ENST00000621897 LARP1Q6PKG0 1096 aaKnown RBP9.31□□□□□ -0.92
BRCA1-229ENST00000621897 L3MBTL2Q969R5 705 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 TRERF1Q96PN7 1200 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 VRTNQ9H8Y1 702 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 MBIPQ9NS73 344 aa9.31□□□□□ -0.92
BRCA1-229ENST00000621897 RFX1P22670 979 aa9.3□□□□□ -0.92
BRCA1-229ENST00000621897 NOS2P35228 1153 aa9.3□□□□□ -0.92
BRCA1-229ENST00000621897 SRSF11Q05519 484 aaKnown RBP9.3□□□□□ -0.92
BRCA1-229ENST00000621897 DPYDQ12882 1025 aa9.3□□□□□ -0.92
BRCA1-229ENST00000621897 LBRQ14739 615 aaKnown RBP9.3□□□□□ -0.92
BRCA1-229ENST00000621897 TEAD4Q15561 434 aa9.3□□□□□ -0.92
BRCA1-229ENST00000621897 NBPF1Q3BBV0 1214 aa9.3□□□□□ -0.92
BRCA1-229ENST00000621897 CDCA8Q53HL2 280 aa9.3□□□□□ -0.92
BRCA1-229ENST00000621897 EFHC2Q5JST6 749 aa9.3□□□□□ -0.92
BRCA1-229ENST00000621897 C1orf216Q8TAB5 229 aa9.3□□□□□ -0.92
BRCA1-229ENST00000621897 ZDHHC3Q9NYG2 299 aa9.3□□□□□ -0.92
BRCA1-229ENST00000621897 IGF1RP08069 1367 aa9.29□□□□□ -0.92
BRCA1-229ENST00000621897 FAM196BA6NMK8 535 aa9.29□□□□□ -0.92
BRCA1-229ENST00000621897 LGR5O75473 907 aa9.29□□□□□ -0.92
BRCA1-229ENST00000621897 SEC13P55735 322 aa9.29□□□□□ -0.92
BRCA1-229ENST00000621897 KLRG1Q96E93 195 aa9.29□□□□□ -0.92
BRCA1-229ENST00000621897 ABHD17AQ96GS6 310 aa9.29□□□□□ -0.92
BRCA1-229ENST00000621897 ZIC5Q96T25 663 aa9.29□□□□□ -0.92
BRCA1-229ENST00000621897 NDFIP2Q9NV92 336 aa9.29□□□□□ -0.92
BRCA1-229ENST00000621897 A0A1W2PNR3 127 aa9.28□□□□□ -0.92
BRCA1-229ENST00000621897 EML1O00423 815 aa9.28□□□□□ -0.92
BRCA1-229ENST00000621897 C21orf2O43822 256 aa9.28□□□□□ -0.92
BRCA1-229ENST00000621897 BNIP3LO60238 219 aa9.28□□□□□ -0.92
BRCA1-229ENST00000621897 LYPD4Q6UWN0 246 aa9.28□□□□□ -0.92
BRCA1-229ENST00000621897 ANKMY2Q8IV38 441 aa9.28□□□□□ -0.92
BRCA1-229ENST00000621897 ARXQ96QS3 562 aa9.28□□□□□ -0.92
BRCA1-229ENST00000621897 CFHR5Q9BXR6 569 aa9.28□□□□□ -0.92
BRCA1-229ENST00000621897 ZCCHC2Q9C0B9 1178 aaKnown RBP9.28□□□□□ -0.92
BRCA1-229ENST00000621897 ZNF232Q9UNY5 417 aa9.28□□□□□ -0.92
BRCA1-229ENST00000621897 RBM19Q9Y4C8 960 aaKnown RBP9.28□□□□□ -0.92
BRCA1-229ENST00000621897 ARID3CA6NKF2 412 aa9.27□□□□□ -0.93
BRCA1-229ENST00000621897 TATP17735 454 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-229ENST00000621897 MX2P20592 715 aa9.27□□□□□ -0.93
BRCA1-229ENST00000621897 ARSJQ5FYB0 599 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-229ENST00000621897 HCN2Q9UL51 889 aa9.27□□□□□ -0.93
BRCA1-229ENST00000621897 SERTM1A2A2V5 107 aa9.26□□□□□ -0.93
BRCA1-229ENST00000621897 FAM181BA6NEQ2 426 aa9.26□□□□□ -0.93
BRCA1-229ENST00000621897 PSMA6P60900 246 aaKnown RBP9.26□□□□□ -0.93
BRCA1-229ENST00000621897 POTEAQ6S8J7 498 aa9.26□□□□□ -0.93
BRCA1-229ENST00000621897 SVOPQ8N4V2 548 aa9.26□□□□□ -0.93
BRCA1-229ENST00000621897 NLRP8Q86W28 1048 aa9.25□□□□□ -0.93
BRCA1-229ENST00000621897 GAS2L2Q8NHY3 880 aa9.25□□□□□ -0.93
BRCA1-229ENST00000621897 C7orf43Q8WVR3 580 aa9.25□□□□□ -0.93
BRCA1-229ENST00000621897 ATXN7L1Q9ULK2 861 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-229ENST00000621897 ATAD2Q6PL18 1390 aa9.24□□□□□ -0.93
BRCA1-229ENST00000621897 C2CD2LO14523 706 aa9.24□□□□□ -0.93
BRCA1-229ENST00000621897 PPP1R12BO60237 982 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-229ENST00000621897 ARHGEF15O94989 841 aa9.24□□□□□ -0.93
BRCA1-229ENST00000621897 CELA2BP08218 269 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-229ENST00000621897 BICDL1Q6ZP65 573 aa9.24□□□□□ -0.93
BRCA1-229ENST00000621897 ACDQ96AP0 544 aa9.24□□□□□ -0.93
BRCA1-229ENST00000621897 HINFPQ9BQA5 517 aa9.24□□□□□ -0.93
BRCA1-229ENST00000621897 PHF24Q9UPV7 400 aa9.24□□□□□ -0.93
BRCA1-229ENST00000621897 HCN4Q9Y3Q4 1203 aa9.24□□□□□ -0.93
BRCA1-229ENST00000621897 PCDHGC4Q9Y5F7 938 aa9.24□□□□□ -0.93
BRCA1-229ENST00000621897 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-229ENST00000621897 DCDC2BA2VCK2 349 aa9.23□□□□□ -0.93
BRCA1-229ENST00000621897 ATXN7O15265 892 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-229ENST00000621897 FGFR3P22607 806 aa9.23□□□□□ -0.93
BRCA1-229ENST00000621897 SRPK2P78362 688 aaKnown RBP9.23□□□□□ -0.93
BRCA1-229ENST00000621897 CTBSQ01459 385 aa9.23□□□□□ -0.93
BRCA1-229ENST00000621897 FIGNL1Q6PIW4 674 aa9.23□□□□□ -0.93
BRCA1-229ENST00000621897 SCG3Q8WXD2 468 aaKnown RBP9.23□□□□□ -0.93
BRCA1-229ENST00000621897 HIRAP54198 1017 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-229ENST00000621897 CHMP7Q8WUX9 453 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-229ENST00000621897 C2orf49Q9BVC5 232 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-229ENST00000621897 PHACTR1Q9C0D0 580 aa9.22□□□□□ -0.93
BRCA1-229ENST00000621897 ADAMTS8Q9UP79 889 aa9.22□□□□□ -0.93
BRCA1-229ENST00000621897 MAPTP10636 758 aaKnown RBP9.21□□□□□ -0.94
BRCA1-229ENST00000621897 TNP2Q05952 138 aa9.21□□□□□ -0.94
BRCA1-229ENST00000621897 LRRC69Q6ZNQ3 347 aa9.21□□□□□ -0.94
BRCA1-229ENST00000621897 ZMIZ1Q9ULJ6 1067 aa9.21□□□□□ -0.94
BRCA1-229ENST00000621897 KHNYNO15037 678 aaKnown RBP9.2□□□□□ -0.94
BRCA1-229ENST00000621897 RHPN1Q8TCX5 695 aa9.2□□□□□ -0.94
BRCA1-229ENST00000621897 HSH2DQ96JZ2 352 aa9.2□□□□□ -0.94
BRCA1-229ENST00000621897 NOVA2Q9UNW9 492 aaKnown RBP9.2□□□□□ -0.94
BRCA1-229ENST00000621897 NSFL1CQ9UNZ2 370 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms