RNA–Protein interactions for RNA: ENST00000621665.1

GRAMD4P3-201, Transcript of GRAM domain containing 4 pseudogene 3, humanhuman

BASIC

Gene GRAMD4P3, Length 1,669 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4P3-201ENST00000621665 DCTN1Q14203 1278 aa21.25■□□□□ 0.99
GRAMD4P3-201ENST00000621665 SOS1Q07889 1333 aaPredicted RBP21.25■□□□□ 0.99
GRAMD4P3-201ENST00000621665 SNRPA1P09661 255 aaKnown RBP21.24■□□□□ 0.99
GRAMD4P3-201ENST00000621665 USP42Q9H9J4 1324 aaKnown RBP21.24■□□□□ 0.99
GRAMD4P3-201ENST00000621665 DLG5Q8TDM6 1919 aa21.24■□□□□ 0.99
GRAMD4P3-201ENST00000621665 SMIM5Q71RC9 77 aa21.24■□□□□ 0.99
GRAMD4P3-201ENST00000621665 GYS1P13807 737 aa21.23■□□□□ 0.99
GRAMD4P3-201ENST00000621665 TMPOP42166 694 aaKnown RBP21.23■□□□□ 0.99
GRAMD4P3-201ENST00000621665 BABAM1Q9NWV8 329 aa21.23■□□□□ 0.99
GRAMD4P3-201ENST00000621665 COL15A1P39059 1388 aa21.22■□□□□ 0.99
GRAMD4P3-201ENST00000621665 MMP10P09238 476 aa21.22■□□□□ 0.99
GRAMD4P3-201ENST00000621665 ADAMTS8Q9UP79 889 aa21.22■□□□□ 0.99
GRAMD4P3-201ENST00000621665 ZBTB1Q9Y2K1 713 aa21.22■□□□□ 0.99
GRAMD4P3-201ENST00000621665 PARP3Q9Y6F1 533 aa21.22■□□□□ 0.99
GRAMD4P3-201ENST00000621665 IL6STP40189 918 aaPredicted RBP21.21■□□□□ 0.99
GRAMD4P3-201ENST00000621665 NARFQ9UHQ1 456 aa21.21■□□□□ 0.99
GRAMD4P3-201ENST00000621665 CANXP27824 592 aaKnown RBP21.21■□□□□ 0.99
GRAMD4P3-201ENST00000621665 C4AP0C0L4 1744 aa21.21■□□□□ 0.99
GRAMD4P3-201ENST00000621665 EIF5P55010 431 aaKnown RBP21.19■□□□□ 0.98
GRAMD4P3-201ENST00000621665 KCNQ3O43525 872 aa21.18■□□□□ 0.98
GRAMD4P3-201ENST00000621665 CCDC146Q8IYE0 955 aa21.18■□□□□ 0.98
GRAMD4P3-201ENST00000621665 GPR162Q16538 588 aa21.18■□□□□ 0.98
GRAMD4P3-201ENST00000621665 USPL1Q5W0Q7 1092 aa21.17■□□□□ 0.98
GRAMD4P3-201ENST00000621665 SRP68Q9UHB9 627 aaKnown RBP21.16■□□□□ 0.98
GRAMD4P3-201ENST00000621665 TSPYL4Q9UJ04 414 aa21.16■□□□□ 0.98
GRAMD4P3-201ENST00000621665 CALD1Q05682 793 aaKnown RBP21.15■□□□□ 0.98
GRAMD4P3-201ENST00000621665 NEUROD2Q15784 382 aa21.15■□□□□ 0.98
GRAMD4P3-201ENST00000621665 GRIN3BO60391 1043 aa21.15■□□□□ 0.98
GRAMD4P3-201ENST00000621665 TGFB2P61812 414 aa21.15■□□□□ 0.98
GRAMD4P3-201ENST00000621665 FKBP8Q14318 412 aa21.15■□□□□ 0.98
GRAMD4P3-201ENST00000621665 NLGN2Q8NFZ4 835 aa21.15■□□□□ 0.98
GRAMD4P3-201ENST00000621665 ZNF330Q9Y3S2 320 aaPredicted RBP21.15■□□□□ 0.98
GRAMD4P3-201ENST00000621665 USP16Q9Y5T5 823 aa21.15■□□□□ 0.98
GRAMD4P3-201ENST00000621665 KDM3BQ7LBC6 1761 aa21.14■□□□□ 0.98
GRAMD4P3-201ENST00000621665 THUMPD2Q9BTF0 503 aaKnown RBP21.14■□□□□ 0.97
GRAMD4P3-201ENST00000621665 MIS18AQ9NYP9 233 aa21.14■□□□□ 0.97
GRAMD4P3-201ENST00000621665 A1BGP04217 495 aa21.13■□□□□ 0.97
GRAMD4P3-201ENST00000621665 EIF4A1P60842 406 aaKnown RBP21.13■□□□□ 0.97
GRAMD4P3-201ENST00000621665 RGL2O15211 777 aa21.12■□□□□ 0.97
GRAMD4P3-201ENST00000621665 GIGYF1O75420 1035 aaPredicted RBP21.12■□□□□ 0.97
GRAMD4P3-201ENST00000621665 PELP1Q8IZL8 1130 aaKnown RBP21.12■□□□□ 0.97
GRAMD4P3-201ENST00000621665 MRS2Q9HD23 443 aa21.12■□□□□ 0.97
GRAMD4P3-201ENST00000621665 RRP7AQ9Y3A4 280 aaKnown RBP21.12■□□□□ 0.97
GRAMD4P3-201ENST00000621665 TM4SF1P30408 202 aa21.12■□□□□ 0.97
GRAMD4P3-201ENST00000621665 ZNF652Q9Y2D9 606 aa21.12■□□□□ 0.97
GRAMD4P3-201ENST00000621665 ERBB4Q15303 1308 aa21.1■□□□□ 0.97
GRAMD4P3-201ENST00000621665 DZIP3Q86Y13 1208 aaKnown RBP21.1■□□□□ 0.97
GRAMD4P3-201ENST00000621665 LAMB4A4D0S4 1761 aa21.1■□□□□ 0.97
GRAMD4P3-201ENST00000621665 C10orf71Q711Q0 1435 aa21.1■□□□□ 0.97
GRAMD4P3-201ENST00000621665 CLEC4GQ6UXB4 293 aa21.09■□□□□ 0.97
GRAMD4P3-201ENST00000621665 TRIM35Q9UPQ4 493 aa21.09■□□□□ 0.97
GRAMD4P3-201ENST00000621665 TBC1D2BQ9UPU7 963 aa21.09■□□□□ 0.97
GRAMD4P3-201ENST00000621665 POLRMTO00411 1230 aaKnown RBP21.08■□□□□ 0.96
GRAMD4P3-201ENST00000621665 APAF1O14727 1248 aa21.08■□□□□ 0.96
GRAMD4P3-201ENST00000621665 YY1P25490 414 aa21.08■□□□□ 0.96
GRAMD4P3-201ENST00000621665 NFIXQ14938 502 aa21.08■□□□□ 0.96
GRAMD4P3-201ENST00000621665 KIF13BQ9NQT8 1826 aa21.08■□□□□ 0.96
GRAMD4P3-201ENST00000621665 PRAMEF22A3QJZ6 481 aa21.07■□□□□ 0.96
GRAMD4P3-201ENST00000621665 CHL1O00533 1208 aa21.06■□□□□ 0.96
GRAMD4P3-201ENST00000621665 DDR1Q08345 913 aa21.06■□□□□ 0.96
GRAMD4P3-201ENST00000621665 CFAP44Q96MT7 982 aa21.06■□□□□ 0.96
GRAMD4P3-201ENST00000621665 SCN7AQ01118 1682 aa21.06■□□□□ 0.96
GRAMD4P3-201ENST00000621665 NCBP3Q53F19 620 aaKnown RBP21.05■□□□□ 0.96
GRAMD4P3-201ENST00000621665 SETDB2Q96T68 719 aa21.05■□□□□ 0.96
GRAMD4P3-201ENST00000621665 BCL2L12Q9HB09 334 aa21.05■□□□□ 0.96
GRAMD4P3-201ENST00000621665 PDZRN3Q9UPQ7 1066 aa21.05■□□□□ 0.96
GRAMD4P3-201ENST00000621665 LAS1LQ9Y4W2 734 aaKnown RBP21.05■□□□□ 0.96
GRAMD4P3-201ENST00000621665 CARMIL3Q8ND23 1372 aa21.05■□□□□ 0.96
GRAMD4P3-201ENST00000621665 SERPINB2P05120 415 aa21.05■□□□□ 0.96
GRAMD4P3-201ENST00000621665 CHMP4AQ9BY43 222 aa21.05■□□□□ 0.96
GRAMD4P3-201ENST00000621665 CAMTA2O94983 1202 aa21.04■□□□□ 0.96
GRAMD4P3-201ENST00000621665 GNAI1P63096 354 aa21.04■□□□□ 0.96
GRAMD4P3-201ENST00000621665 HOXB7P09629 217 aa21.03■□□□□ 0.96
GRAMD4P3-201ENST00000621665 KIF6Q6ZMV9 814 aa21.03■□□□□ 0.96
GRAMD4P3-201ENST00000621665 PXDNLA1KZ92 1463 aa21.03■□□□□ 0.96
GRAMD4P3-201ENST00000621665 NBPF26B4DH59 902 aa21.02■□□□□ 0.96
GRAMD4P3-201ENST00000621665 NPHP1O15259 732 aa21.02■□□□□ 0.96
GRAMD4P3-201ENST00000621665 NBPF10Q6P3W6 841 aaKnown RBP21.02■□□□□ 0.96
GRAMD4P3-201ENST00000621665 BICDL1Q6ZP65 573 aa21.02■□□□□ 0.96
GRAMD4P3-201ENST00000621665 NBPF15Q8N660 670 aa21.02■□□□□ 0.96
GRAMD4P3-201ENST00000621665 IFT57Q9NWB7 429 aa21.02■□□□□ 0.96
GRAMD4P3-201ENST00000621665 CHD4Q14839 1912 aa21.02■□□□□ 0.96
GRAMD4P3-201ENST00000621665 TBC1D9BQ66K14 1250 aa21.02■□□□□ 0.95
GRAMD4P3-201ENST00000621665 ERVV-1B6SEH8 477 aa21.01■□□□□ 0.95
GRAMD4P3-201ENST00000621665 CCDC27Q2M243 656 aa21.01■□□□□ 0.95
GRAMD4P3-201ENST00000621665 CCDC184Q52MB2 194 aa21.01■□□□□ 0.95
GRAMD4P3-201ENST00000621665 PIM2Q9P1W9 311 aa21.01■□□□□ 0.95
GRAMD4P3-201ENST00000621665 BCORQ6W2J9 1755 aa21■□□□□ 0.95
GRAMD4P3-201ENST00000621665 YBX3P16989 372 aaKnown RBP eCLIP21■□□□□ 0.95
GRAMD4P3-201ENST00000621665 PIP4K2AP48426 406 aaPredicted RBP21■□□□□ 0.95
GRAMD4P3-201ENST00000621665 NRXN2Q9P2S2 1712 aa21■□□□□ 0.95
GRAMD4P3-201ENST00000621665 A0A0G2JLW4 131 aa20.99■□□□□ 0.95
GRAMD4P3-201ENST00000621665 DPEP1P16444 411 aa20.99■□□□□ 0.95
GRAMD4P3-201ENST00000621665 EIF2S2P20042 333 aaKnown RBP20.99■□□□□ 0.95
GRAMD4P3-201ENST00000621665 NGEFQ8N5V2 710 aa20.99■□□□□ 0.95
GRAMD4P3-201ENST00000621665 PDE6BP35913 854 aa20.99■□□□□ 0.95
GRAMD4P3-201ENST00000621665 ST5P78524 1137 aa20.99■□□□□ 0.95
GRAMD4P3-201ENST00000621665 MYL6BP14649 208 aa20.98■□□□□ 0.95
GRAMD4P3-201ENST00000621665 CNBD1Q8NA66 436 aa20.98■□□□□ 0.95
GRAMD4P3-201ENST00000621665 BRIP1Q9BX63 1249 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms