RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 PDE4CQ08493 712 aa11.1□□□□□ -0.63
RBFOX1-223ENST00000620507 TAOK2Q9UL54 1235 aa11.1□□□□□ -0.63
RBFOX1-223ENST00000620507 CPS1P31327 1500 aa11.09□□□□□ -0.63
RBFOX1-223ENST00000620507 ZRSR1Q15695 479 aaKnown RBP11.09□□□□□ -0.63
RBFOX1-223ENST00000620507 LARP1Q6PKG0 1096 aaKnown RBP11.09□□□□□ -0.63
RBFOX1-223ENST00000620507 NEUROD6Q96NK8 337 aa11.09□□□□□ -0.63
RBFOX1-223ENST00000620507 RIMBP3CA6NJZ7 1639 aa11.09□□□□□ -0.63
RBFOX1-223ENST00000620507 RIMBP3BA6NNM3 1639 aa11.09□□□□□ -0.63
RBFOX1-223ENST00000620507 RIMBP3Q9UFD9 1639 aa11.09□□□□□ -0.63
RBFOX1-223ENST00000620507 DIP2BQ9P265 1576 aa11.09□□□□□ -0.63
RBFOX1-223ENST00000620507 ORAI2Q96SN7 254 aa11.09□□□□□ -0.63
RBFOX1-223ENST00000620507 SHPRHQ149N8 1683 aa11.08□□□□□ -0.63
RBFOX1-223ENST00000620507 SPATA31D1Q6ZQQ2 1576 aa11.08□□□□□ -0.64
RBFOX1-223ENST00000620507 CYP46A1Q9Y6A2 500 aa11.08□□□□□ -0.64
RBFOX1-223ENST00000620507 WDR33Q9C0J8 1336 aaKnown RBP11.08□□□□□ -0.64
RBFOX1-223ENST00000620507 XRCC6P12956 609 aaKnown RBP eCLIP11.08□□□□□ -0.64
RBFOX1-223ENST00000620507 PSMA5P28066 241 aa11.08□□□□□ -0.64
RBFOX1-223ENST00000620507 CDC42BPGQ6DT37 1551 aa11.08□□□□□ -0.64
RBFOX1-223ENST00000620507 TMX3Q96JJ7 454 aa11.07□□□□□ -0.64
RBFOX1-223ENST00000620507 ECHDC1Q9NTX5 307 aa11.07□□□□□ -0.64
RBFOX1-223ENST00000620507 CHMLP26374 656 aa11.07□□□□□ -0.64
RBFOX1-223ENST00000620507 KSR2Q6VAB6 950 aa11.07□□□□□ -0.64
RBFOX1-223ENST00000620507 TOM1L2Q6ZVM7 507 aa11.07□□□□□ -0.64
RBFOX1-223ENST00000620507 RNF214Q8ND24 703 aa11.07□□□□□ -0.64
RBFOX1-223ENST00000620507 JAKMIP1Q96N16 626 aaKnown RBP11.07□□□□□ -0.64
RBFOX1-223ENST00000620507 USP44Q9H0E7 712 aa11.07□□□□□ -0.64
RBFOX1-223ENST00000620507 PRDM11Q9NQV5 511 aa11.07□□□□□ -0.64
RBFOX1-223ENST00000620507 ADGRB2O60241 1585 aa11.07□□□□□ -0.64
RBFOX1-223ENST00000620507 MYO5BQ9ULV0 1848 aa11.07□□□□□ -0.64
RBFOX1-223ENST00000620507 DNAJC2Q99543 621 aaKnown RBP11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 HOXB7P09629 217 aa11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 CASTP20810 708 aaKnown RBP11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 ANAPC15P60006 121 aa11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 MYD88Q99836 296 aa11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 CCDC8Q9H0W5 538 aaPredicted RBP11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 ADAMTS13Q76LX8 1427 aa11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 RNMTO43148 476 aaKnown RBP11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 ALDH1L1O75891 902 aa11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 SLC39A6Q13433 755 aa11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 KLHL40Q2TBA0 621 aa11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 FAM184AQ8NB25 1140 aa11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 TECPR2O15040 1411 aa11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 H3BQV1 296 aa11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 EIF4A1P60842 406 aaKnown RBP11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 ZGPATQ8N5A5 531 aaKnown RBP11.06□□□□□ -0.64
RBFOX1-223ENST00000620507 NBPF7P0C2Y1 421 aaPredicted RBP11.05□□□□□ -0.64
RBFOX1-223ENST00000620507 IFNL2Q8IZJ0 200 aa11.05□□□□□ -0.64
RBFOX1-223ENST00000620507 BOLA2Q9H3K6 86 aa11.05□□□□□ -0.64
RBFOX1-223ENST00000620507 MAP2P11137 1827 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-223ENST00000620507 KIAA2012Q0VF49 1180 aa11.05□□□□□ -0.64
RBFOX1-223ENST00000620507 CCDC173Q0VFZ6 552 aa11.05□□□□□ -0.64
RBFOX1-223ENST00000620507 CWF19L2Q2TBE0 894 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-223ENST00000620507 DDX54Q8TDD1 881 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-223ENST00000620507 PANK2Q9BZ23 570 aa11.05□□□□□ -0.64
RBFOX1-223ENST00000620507 PDRG1Q9NUG6 133 aa11.05□□□□□ -0.64
RBFOX1-223ENST00000620507 CD2BP2O95400 341 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-223ENST00000620507 CHRNA2Q15822 529 aa11.05□□□□□ -0.64
RBFOX1-223ENST00000620507 PRPF40BQ6NWY9 871 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-223ENST00000620507 C19orf44Q9H6X5 657 aa11.05□□□□□ -0.64
RBFOX1-223ENST00000620507 KIF3AQ9Y496 699 aa11.05□□□□□ -0.64
RBFOX1-223ENST00000620507 GRM8O00222 908 aa11.04□□□□□ -0.64
RBFOX1-223ENST00000620507 LINS1Q8NG48 757 aa11.04□□□□□ -0.64
RBFOX1-223ENST00000620507 STRN4Q9NRL3 753 aa11.04□□□□□ -0.64
RBFOX1-223ENST00000620507 USP31Q70CQ4 1352 aa11.04□□□□□ -0.64
RBFOX1-223ENST00000620507 FIBPO43427 364 aa11.04□□□□□ -0.64
RBFOX1-223ENST00000620507 OVOS2A0A0J9YW53 1432 aa11.04□□□□□ -0.64
RBFOX1-223ENST00000620507 OVOS2Q6IE36 1432 aa11.04□□□□□ -0.64
RBFOX1-223ENST00000620507 KCNQ3O43525 872 aa11.04□□□□□ -0.64
RBFOX1-223ENST00000620507 PA2G4Q9UQ80 394 aaKnown RBP11.04□□□□□ -0.64
RBFOX1-223ENST00000620507 LRRFIP1Q32MZ4 808 aaKnown RBP11.03□□□□□ -0.64
RBFOX1-223ENST00000620507 EVI5LQ96CN4 794 aa11.03□□□□□ -0.64
RBFOX1-223ENST00000620507 LARP6Q9BRS8 491 aaKnown RBP11.03□□□□□ -0.64
RBFOX1-223ENST00000620507 BLOC1S2Q6QNY1 142 aa11.03□□□□□ -0.64
RBFOX1-223ENST00000620507 FMNL2Q96PY5 1086 aa11.03□□□□□ -0.64
RBFOX1-223ENST00000620507 LIMCH1Q9UPQ0 1083 aa11.03□□□□□ -0.64
RBFOX1-223ENST00000620507 COPS6Q7L5N1 327 aa11.03□□□□□ -0.64
RBFOX1-223ENST00000620507 DRC7Q8IY82 874 aa11.03□□□□□ -0.64
RBFOX1-223ENST00000620507 NFATC2IPQ8NCF5 419 aa11.03□□□□□ -0.64
RBFOX1-223ENST00000620507 ESPNB1AK53 854 aa11.02□□□□□ -0.64
RBFOX1-223ENST00000620507 PDCP20941 246 aa11.02□□□□□ -0.64
RBFOX1-223ENST00000620507 ANKRD13DQ6ZTN6 518 aa11.02□□□□□ -0.64
RBFOX1-223ENST00000620507 SSH3Q8TE77 659 aa11.02□□□□□ -0.64
RBFOX1-223ENST00000620507 ZSCAN31Q96LW9 406 aaPredicted RBP11.02□□□□□ -0.64
RBFOX1-223ENST00000620507 KIF20BQ96Q89 1820 aa11.02□□□□□ -0.65
RBFOX1-223ENST00000620507 SYCE3A1L190 88 aa11.02□□□□□ -0.65
RBFOX1-223ENST00000620507 PTCD1O75127 700 aaKnown RBP11.02□□□□□ -0.65
RBFOX1-223ENST00000620507 XAGE3Q8WTP9 111 aa11.02□□□□□ -0.65
RBFOX1-223ENST00000620507 SYTL4Q96C24 671 aaPredicted RBP11.02□□□□□ -0.65
RBFOX1-223ENST00000620507 OSBPL3Q9H4L5 887 aa11.02□□□□□ -0.65
RBFOX1-223ENST00000620507 A0A087WZG4 1122 aa11.02□□□□□ -0.65
RBFOX1-223ENST00000620507 SNRPA1P09661 255 aaKnown RBP11.02□□□□□ -0.65
RBFOX1-223ENST00000620507 CADPS2Q86UW7 1296 aa11.02□□□□□ -0.65
RBFOX1-223ENST00000620507 CABLES1Q8TDN4 633 aa11.02□□□□□ -0.65
RBFOX1-223ENST00000620507 CCDC83Q8IWF9 413 aa11.01□□□□□ -0.65
RBFOX1-223ENST00000620507 DDX21Q9NR30 783 aaKnown RBP eCLIP11.01□□□□□ -0.65
RBFOX1-223ENST00000620507 ANKRD1Q15327 319 aa11.01□□□□□ -0.65
RBFOX1-223ENST00000620507 UBE3BQ7Z3V4 1068 aa11.01□□□□□ -0.65
RBFOX1-223ENST00000620507 TSPY26PQ9H489 355 aa11.01□□□□□ -0.65
RBFOX1-223ENST00000620507 TTC41PQ6P2S7 1318 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms