RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 IGSF1Q8N6C5 1336 aa7.72□□□□□ -1.17
CBWD3-215ENST00000619322 PTCD2Q8WV60 388 aaKnown RBP7.72□□□□□ -1.17
CBWD3-215ENST00000619322 AXIN2Q9Y2T1 843 aa7.72□□□□□ -1.17
CBWD3-215ENST00000619322 C14orf37Q86TY3 774 aa7.72□□□□□ -1.17
CBWD3-215ENST00000619322 LHX6Q9UPM6 363 aa7.72□□□□□ -1.17
CBWD3-215ENST00000619322 BTG4Q9NY30 223 aa7.72□□□□□ -1.17
CBWD3-215ENST00000619322 TERF2IPQ9NYB0 399 aa7.72□□□□□ -1.17
CBWD3-215ENST00000619322 PCDH11XQ9BZA7 1347 aa7.71□□□□□ -1.17
CBWD3-215ENST00000619322 PCDH11YQ9BZA8 1340 aa7.71□□□□□ -1.17
CBWD3-215ENST00000619322 LTBP3Q9NS15 1303 aa7.71□□□□□ -1.17
CBWD3-215ENST00000619322 GRXCR2A6NFK2 248 aa7.71□□□□□ -1.18
CBWD3-215ENST00000619322 FOXO3O43524 673 aa7.71□□□□□ -1.18
CBWD3-215ENST00000619322 POGKQ9P215 609 aa7.71□□□□□ -1.18
CBWD3-215ENST00000619322 EVI5O60447 810 aa7.7□□□□□ -1.18
CBWD3-215ENST00000619322 SF3B2Q13435 895 aaKnown RBP7.7□□□□□ -1.18
CBWD3-215ENST00000619322 MAMSTRQ6ZN01 415 aa7.7□□□□□ -1.18
CBWD3-215ENST00000619322 RBM26Q5T8P6 1007 aaKnown RBP7.7□□□□□ -1.18
CBWD3-215ENST00000619322 FAM205CA6NFA0 338 aa7.7□□□□□ -1.18
CBWD3-215ENST00000619322 NUP98P52948 1817 aa7.69□□□□□ -1.18
CBWD3-215ENST00000619322 MAP3K9P80192 1104 aa7.69□□□□□ -1.18
CBWD3-215ENST00000619322 MYT1Q01538 1121 aa7.69□□□□□ -1.18
CBWD3-215ENST00000619322 TSR1Q2NL82 804 aaKnown RBP7.69□□□□□ -1.18
CBWD3-215ENST00000619322 ZNF710Q8N1W2 664 aa7.69□□□□□ -1.18
CBWD3-215ENST00000619322 SMARCC1Q92922 1105 aaPredicted RBP7.69□□□□□ -1.18
CBWD3-215ENST00000619322 SSFA2P28290 1259 aa7.68□□□□□ -1.18
CBWD3-215ENST00000619322 PDIA6Q15084 440 aa7.68□□□□□ -1.18
CBWD3-215ENST00000619322 TRIM52Q96A61 297 aa7.68□□□□□ -1.18
CBWD3-215ENST00000619322 SSC5DA1L4H1 1573 aa7.68□□□□□ -1.18
CBWD3-215ENST00000619322 CDHR5Q9HBB8 845 aa7.68□□□□□ -1.18
CBWD3-215ENST00000619322 USP47Q96K76 1375 aa7.68□□□□□ -1.18
CBWD3-215ENST00000619322 IL2RBP14784 551 aa7.67□□□□□ -1.18
CBWD3-215ENST00000619322 PCDHGA10Q9Y5H3 936 aa7.67□□□□□ -1.18
CBWD3-215ENST00000619322 HEG1Q9ULI3 1381 aa7.67□□□□□ -1.18
CBWD3-215ENST00000619322 SLC34A2O95436 690 aa7.67□□□□□ -1.18
CBWD3-215ENST00000619322 SLC15A2Q16348 729 aa7.67□□□□□ -1.18
CBWD3-215ENST00000619322 VARS2Q5ST30 1063 aaKnown RBP7.67□□□□□ -1.18
CBWD3-215ENST00000619322 MARCH10Q8NA82 808 aaPredicted RBP7.67□□□□□ -1.18
CBWD3-215ENST00000619322 DCAF11Q8TEB1 546 aa7.67□□□□□ -1.18
CBWD3-215ENST00000619322 SPON1Q9HCB6 807 aa7.67□□□□□ -1.18
CBWD3-215ENST00000619322 ERVV-2B6SEH9 535 aa7.67□□□□□ -1.18
CBWD3-215ENST00000619322 TMEM132EQ6IEE7 984 aa7.67□□□□□ -1.18
CBWD3-215ENST00000619322 HDGFL2Q7Z4V5 671 aaPredicted RBP7.67□□□□□ -1.18
CBWD3-215ENST00000619322 RBM33Q96EV2 1170 aaKnown RBP7.67□□□□□ -1.18
CBWD3-215ENST00000619322 PRDM11Q9NQV5 511 aa7.67□□□□□ -1.18
CBWD3-215ENST00000619322 BABAM1Q9NWV8 329 aa7.66□□□□□ -1.18
CBWD3-215ENST00000619322 GRIPAP1Q4V328 841 aa7.66□□□□□ -1.18
CBWD3-215ENST00000619322 L3MBTL2Q969R5 705 aa7.66□□□□□ -1.18
CBWD3-215ENST00000619322 YTHDC1Q96MU7 727 aaKnown RBP7.66□□□□□ -1.18
CBWD3-215ENST00000619322 RNF123Q5XPI4 1314 aa7.66□□□□□ -1.18
CBWD3-215ENST00000619322 HOXC9P31274 260 aa7.65□□□□□ -1.18
CBWD3-215ENST00000619322 MYH3P11055 1940 aa7.65□□□□□ -1.18
CBWD3-215ENST00000619322 RGL3Q3MIN7 710 aa7.65□□□□□ -1.18
CBWD3-215ENST00000619322 HSP90AB1P08238 724 aaKnown RBP7.65□□□□□ -1.19
CBWD3-215ENST00000619322 HOXB1P14653 301 aaPredicted RBP7.65□□□□□ -1.19
CBWD3-215ENST00000619322 TAF1P21675 1872 aa7.64□□□□□ -1.19
CBWD3-215ENST00000619322 ARHGEF1Q92888 912 aaKnown RBP7.64□□□□□ -1.19
CBWD3-215ENST00000619322 BCANQ96GW7 911 aa7.64□□□□□ -1.19
CBWD3-215ENST00000619322 VPS33BQ9H267 617 aa7.64□□□□□ -1.19
CBWD3-215ENST00000619322 C3orf80F5H4A9 247 aa7.64□□□□□ -1.19
CBWD3-215ENST00000619322 PSEN2P49810 448 aa7.64□□□□□ -1.19
CBWD3-215ENST00000619322 EMP3P54852 163 aa7.64□□□□□ -1.19
CBWD3-215ENST00000619322 NGDNQ8NEJ9 315 aaKnown RBP7.64□□□□□ -1.19
CBWD3-215ENST00000619322 PNPLA7Q6ZV29 1317 aa7.64□□□□□ -1.19
CBWD3-215ENST00000619322 DDB1Q16531 1140 aa7.63□□□□□ -1.19
CBWD3-215ENST00000619322 FAM161AQ3B820 660 aa7.63□□□□□ -1.19
CBWD3-215ENST00000619322 ADAM33Q9BZ11 813 aa7.63□□□□□ -1.19
CBWD3-215ENST00000619322 SOS1Q07889 1333 aaPredicted RBP7.63□□□□□ -1.19
CBWD3-215ENST00000619322 CCDC88AQ3V6T2 1871 aa7.63□□□□□ -1.19
CBWD3-215ENST00000619322 OSBPP22059 807 aa7.63□□□□□ -1.19
CBWD3-215ENST00000619322 FECHP22830 423 aa7.63□□□□□ -1.19
CBWD3-215ENST00000619322 DOK7Q18PE1 504 aa7.63□□□□□ -1.19
CBWD3-215ENST00000619322 LARP1Q6PKG0 1096 aaKnown RBP7.63□□□□□ -1.19
CBWD3-215ENST00000619322 HS3ST6Q96QI5 342 aa7.63□□□□□ -1.19
CBWD3-215ENST00000619322 HTATSF1O43719 755 aaKnown RBP7.63□□□□□ -1.19
CBWD3-215ENST00000619322 TGFB2P61812 414 aa7.63□□□□□ -1.19
CBWD3-215ENST00000619322 NBR1Q14596 966 aa7.62□□□□□ -1.19
CBWD3-215ENST00000619322 ZNF454Q8N9F8 522 aa7.62□□□□□ -1.19
CBWD3-215ENST00000619322 DDX17Q92841 729 aaKnown RBP7.62□□□□□ -1.19
CBWD3-215ENST00000619322 GRIN3BO60391 1043 aa7.62□□□□□ -1.19
CBWD3-215ENST00000619322 MINK1Q8N4C8 1332 aaPredicted RBP7.61□□□□□ -1.19
CBWD3-215ENST00000619322 MMP14P50281 582 aa7.61□□□□□ -1.19
CBWD3-215ENST00000619322 STK32BQ9NY57 414 aa7.61□□□□□ -1.19
CBWD3-215ENST00000619322 TRAK1Q9UPV9 953 aa7.61□□□□□ -1.19
CBWD3-215ENST00000619322 COL1A1P02452 1464 aaPredicted RBP7.61□□□□□ -1.19
CBWD3-215ENST00000619322 TESPA1A2RU30 521 aaPredicted RBP7.61□□□□□ -1.19
CBWD3-215ENST00000619322 AMOTQ4VCS5 1084 aa7.61□□□□□ -1.19
CBWD3-215ENST00000619322 POTEMA6NI47 508 aa7.6□□□□□ -1.19
CBWD3-215ENST00000619322 ABTB2Q8N961 1025 aa7.6□□□□□ -1.19
CBWD3-215ENST00000619322 NECTIN2Q92692 538 aa7.6□□□□□ -1.19
CBWD3-215ENST00000619322 ERBB4Q15303 1308 aa7.6□□□□□ -1.19
CBWD3-215ENST00000619322 KLRG2A4D1S0 409 aaPredicted RBP7.6□□□□□ -1.19
CBWD3-215ENST00000619322 COL9A1P20849 921 aa7.6□□□□□ -1.19
CBWD3-215ENST00000619322 TMF1P82094 1093 aa7.6□□□□□ -1.19
CBWD3-215ENST00000619322 NBPF1Q3BBV0 1214 aa7.6□□□□□ -1.19
CBWD3-215ENST00000619322 POTEGQ6S5H5 508 aa7.6□□□□□ -1.19
CBWD3-215ENST00000619322 ANO8Q9HCE9 1232 aaPredicted RBP7.6□□□□□ -1.19
CBWD3-215ENST00000619322 TXNRD1Q16881 649 aa7.6□□□□□ -1.19
CBWD3-215ENST00000619322 NUTM2BA6NNL0 878 aaPredicted RBP7.59□□□□□ -1.19
CBWD3-215ENST00000619322 NUTM2EB1AL46 878 aaPredicted RBP7.59□□□□□ -1.19
CBWD3-215ENST00000619322 ADAMTS2O95450 1211 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms