RNA–Protein interactions for RNA: ENST00000619158.1

CDH11-219, Transcript of cadherin 11, humanhuman

Gene CDH11, Length 3,639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-219ENST00000619158 LRRC4BQ9NT99 713 aa7.08□□□□□ -1.28
CDH11-219ENST00000619158 NLRP2Q9NX02 1062 aa7.08□□□□□ -1.28
CDH11-219ENST00000619158 ZBTB47Q9UFB7 747 aaPredicted RBP7.08□□□□□ -1.28
CDH11-219ENST00000619158 RC3H1Q5TC82 1133 aaKnown RBP7.07□□□□□ -1.28
CDH11-219ENST00000619158 PHACTR3Q96KR7 559 aa7.07□□□□□ -1.28
CDH11-219ENST00000619158 ATG3Q9NT62 314 aa7.07□□□□□ -1.28
CDH11-219ENST00000619158 DUOX1Q9NRD9 1551 aa7.07□□□□□ -1.28
CDH11-219ENST00000619158 SNED1Q8TER0 1413 aa7.07□□□□□ -1.28
CDH11-219ENST00000619158 CCER2I3L3R5 266 aa7.07□□□□□ -1.28
CDH11-219ENST00000619158 PLEKHO1Q53GL0 409 aaPredicted RBP7.07□□□□□ -1.28
CDH11-219ENST00000619158 PIGBQ92521 554 aa7.07□□□□□ -1.28
CDH11-219ENST00000619158 TRIM35Q9UPQ4 493 aa7.07□□□□□ -1.28
CDH11-219ENST00000619158 CACNA1SQ13698 1873 aa7.06□□□□□ -1.28
CDH11-219ENST00000619158 SULT6B1Q6IMI4 303 aa7.06□□□□□ -1.28
CDH11-219ENST00000619158 IL17REQ8NFR9 667 aa7.06□□□□□ -1.28
CDH11-219ENST00000619158 GAS2L2Q8NHY3 880 aa7.06□□□□□ -1.28
CDH11-219ENST00000619158 SOS1Q07889 1333 aaPredicted RBP7.06□□□□□ -1.28
CDH11-219ENST00000619158 IL16Q14005 1332 aa7.06□□□□□ -1.28
CDH11-219ENST00000619158 KCNQ2O43526 872 aa7.06□□□□□ -1.28
CDH11-219ENST00000619158 RAPGEF4Q8WZA2 1011 aa7.06□□□□□ -1.28
CDH11-219ENST00000619158 NFE2L2Q16236 605 aa7.06□□□□□ -1.28
CDH11-219ENST00000619158 ATP10DQ9P241 1426 aa7.05□□□□□ -1.28
CDH11-219ENST00000619158 ANO8Q9HCE9 1232 aaPredicted RBP7.05□□□□□ -1.28
CDH11-219ENST00000619158 PNPLA7Q6ZV29 1317 aa7.05□□□□□ -1.28
CDH11-219ENST00000619158 CFAP53Q96M91 514 aa7.05□□□□□ -1.28
CDH11-219ENST00000619158 STK24Q9Y6E0 443 aa7.05□□□□□ -1.28
CDH11-219ENST00000619158 HMGB2P26583 209 aaKnown RBP7.05□□□□□ -1.28
CDH11-219ENST00000619158 AAMPQ13685 434 aa7.05□□□□□ -1.28
CDH11-219ENST00000619158 ZNF827Q17R98 1081 aa7.05□□□□□ -1.28
CDH11-219ENST00000619158 CCDC184Q52MB2 194 aa7.05□□□□□ -1.28
CDH11-219ENST00000619158 NGEFQ8N5V2 710 aa7.05□□□□□ -1.28
CDH11-219ENST00000619158 DDX10Q13206 875 aaKnown RBP7.04□□□□□ -1.28
CDH11-219ENST00000619158 EZH2Q15910 746 aaKnown RBP7.04□□□□□ -1.28
CDH11-219ENST00000619158 TRMT2AQ8IZ69 625 aaKnown RBP7.04□□□□□ -1.28
CDH11-219ENST00000619158 ADAMTSL1Q8N6G6 1762 aa7.04□□□□□ -1.28
CDH11-219ENST00000619158 TRIM37O94972 964 aa7.04□□□□□ -1.28
CDH11-219ENST00000619158 PDE3BQ13370 1112 aa7.04□□□□□ -1.28
CDH11-219ENST00000619158 SMARCC1Q92922 1105 aaPredicted RBP7.04□□□□□ -1.28
CDH11-219ENST00000619158 BAG6P46379 1132 aa7.03□□□□□ -1.28
CDH11-219ENST00000619158 BRPF1P55201 1214 aaPredicted RBP7.03□□□□□ -1.28
CDH11-219ENST00000619158 TXNRD1Q16881 649 aa7.03□□□□□ -1.28
CDH11-219ENST00000619158 COL4A1P02462 1669 aa7.03□□□□□ -1.28
CDH11-219ENST00000619158 SPEF2Q9C093 1822 aa7.03□□□□□ -1.28
CDH11-219ENST00000619158 GNAT3A8MTJ3 354 aa7.03□□□□□ -1.28
CDH11-219ENST00000619158 CSB-PGBD3P0DP91 1061 aa7.03□□□□□ -1.28
CDH11-219ENST00000619158 PRKAR2BP31323 418 aa7.03□□□□□ -1.28
CDH11-219ENST00000619158 PTGER2P43116 358 aa7.03□□□□□ -1.28
CDH11-219ENST00000619158 CACNB1Q02641 598 aaPredicted RBP7.03□□□□□ -1.28
CDH11-219ENST00000619158 ITPK1Q13572 414 aa7.03□□□□□ -1.28
CDH11-219ENST00000619158 LINC00116Q8NCU8 138 aa7.03□□□□□ -1.28
CDH11-219ENST00000619158 INTS5Q6P9B9 1019 aaKnown RBP7.03□□□□□ -1.28
CDH11-219ENST00000619158 RUNDC1Q96C34 613 aa7.03□□□□□ -1.28
CDH11-219ENST00000619158 ERBB4Q15303 1308 aa7.03□□□□□ -1.28
CDH11-219ENST00000619158 AMIGO3Q86WK7 504 aa7.02□□□□□ -1.29
CDH11-219ENST00000619158 RNF25Q96BH1 459 aaPredicted RBP7.02□□□□□ -1.29
CDH11-219ENST00000619158 PYGBP11216 843 aa7.02□□□□□ -1.29
CDH11-219ENST00000619158 ZNF530Q6P9A1 599 aaPredicted RBP7.02□□□□□ -1.29
CDH11-219ENST00000619158 LGR6Q9HBX8 967 aa7.02□□□□□ -1.29
CDH11-219ENST00000619158 CHL1O00533 1208 aa7.02□□□□□ -1.29
CDH11-219ENST00000619158 HOXB7P09629 217 aa7.02□□□□□ -1.29
CDH11-219ENST00000619158 TMPOP42166 694 aaKnown RBP7.02□□□□□ -1.29
CDH11-219ENST00000619158 PRIM1P49642 420 aaKnown RBP7.02□□□□□ -1.29
CDH11-219ENST00000619158 PNNQ9H307 717 aaKnown RBP7.02□□□□□ -1.29
CDH11-219ENST00000619158 SOX12O15370 315 aa7.01□□□□□ -1.29
CDH11-219ENST00000619158 TAF1P21675 1872 aa7.01□□□□□ -1.29
CDH11-219ENST00000619158 SSFA2P28290 1259 aa7.01□□□□□ -1.29
CDH11-219ENST00000619158 NUDCQ9Y266 331 aa7.01□□□□□ -1.29
CDH11-219ENST00000619158 SSUH2Q9Y2M2 353 aa7.01□□□□□ -1.29
CDH11-219ENST00000619158 CYP19A1P11511 503 aaPredicted RBP7.01□□□□□ -1.29
CDH11-219ENST00000619158 SLC15A2Q16348 729 aa7.01□□□□□ -1.29
CDH11-219ENST00000619158 FAM182BQ5T319 152 aa7.01□□□□□ -1.29
CDH11-219ENST00000619158 DEFB132Q7Z7B7 95 aa7.01□□□□□ -1.29
CDH11-219ENST00000619158 LTV1Q96GA3 475 aaPredicted RBP7.01□□□□□ -1.29
CDH11-219ENST00000619158 EN1Q05925 392 aaPredicted RBP7□□□□□ -1.29
CDH11-219ENST00000619158 BRPF3Q9ULD4 1205 aa7□□□□□ -1.29
CDH11-219ENST00000619158 ADAMTS8Q9UP79 889 aa7□□□□□ -1.29
CDH11-219ENST00000619158 ECM29Q5VYK3 1845 aa7□□□□□ -1.29
CDH11-219ENST00000619158 APBA3O96018 575 aa7□□□□□ -1.29
CDH11-219ENST00000619158 SLC16A10Q8TF71 515 aa7□□□□□ -1.29
CDH11-219ENST00000619158 ASAP1Q9ULH1 1129 aa7□□□□□ -1.29
CDH11-219ENST00000619158 PAPPA2Q9BXP8 1791 aa6.99□□□□□ -1.29
CDH11-219ENST00000619158 LOC102724428A0A0B4J2F2 783 aa6.99□□□□□ -1.29
CDH11-219ENST00000619158 TNNT2P45379 298 aaPredicted RBP6.99□□□□□ -1.29
CDH11-219ENST00000619158 SIK1P57059 783 aa6.99□□□□□ -1.29
CDH11-219ENST00000619158 CCDC88AQ3V6T2 1871 aa6.99□□□□□ -1.29
CDH11-219ENST00000619158 WDR90Q96KV7 1748 aa6.99□□□□□ -1.29
CDH11-219ENST00000619158 HMOX1P09601 288 aa6.99□□□□□ -1.29
CDH11-219ENST00000619158 EIF4A1P60842 406 aaKnown RBP6.99□□□□□ -1.29
CDH11-219ENST00000619158 PDIA6Q15084 440 aa6.99□□□□□ -1.29
CDH11-219ENST00000619158 FAM212AQ96EL1 285 aa6.99□□□□□ -1.29
CDH11-219ENST00000619158 COL15A1P39059 1388 aa6.99□□□□□ -1.29
CDH11-219ENST00000619158 IFT57Q9NWB7 429 aa6.99□□□□□ -1.29
CDH11-219ENST00000619158 USP35Q9P2H5 1018 aa6.99□□□□□ -1.29
CDH11-219ENST00000619158 CHRM1P11229 460 aaPredicted RBP6.98□□□□□ -1.29
CDH11-219ENST00000619158 ZNF790Q6PG37 636 aa6.98□□□□□ -1.29
CDH11-219ENST00000619158 TMOD3Q9NYL9 352 aa6.98□□□□□ -1.29
CDH11-219ENST00000619158 TMED8Q6PL24 325 aaPredicted RBP6.98□□□□□ -1.29
CDH11-219ENST00000619158 TICAM2Q86XR7 235 aa6.98□□□□□ -1.29
CDH11-219ENST00000619158 USP42Q9H9J4 1324 aaKnown RBP6.98□□□□□ -1.29
CDH11-219ENST00000619158 EIF5P55010 431 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms