RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 DCAF5Q96JK2 942 aa12.37□□□□□ -0.43
SYN3-213ENST00000619146 FER1L6Q2WGJ9 1857 aa12.37□□□□□ -0.43
SYN3-213ENST00000619146 MYBBP1AQ9BQG0 1328 aaKnown RBP12.37□□□□□ -0.43
SYN3-213ENST00000619146 CNTNAP4Q9C0A0 1308 aa12.37□□□□□ -0.43
SYN3-213ENST00000619146 CRKLP46109 303 aaKnown RBP12.36□□□□□ -0.43
SYN3-213ENST00000619146 CABP4P57796 275 aa12.36□□□□□ -0.43
SYN3-213ENST00000619146 FSTL1Q12841 308 aa12.36□□□□□ -0.43
SYN3-213ENST00000619146 CNGB1Q14028 1251 aaPredicted RBP12.36□□□□□ -0.43
SYN3-213ENST00000619146 POLKQ9UBT6 870 aa12.36□□□□□ -0.43
SYN3-213ENST00000619146 COL11A2P13942 1736 aaPredicted RBP12.36□□□□□ -0.43
SYN3-213ENST00000619146 NRXN2Q9P2S2 1712 aa12.35□□□□□ -0.43
SYN3-213ENST00000619146 HSPA1AP0DMV8 641 aaKnown RBP12.35□□□□□ -0.43
SYN3-213ENST00000619146 HSPA1BP0DMV9 641 aaKnown RBP12.35□□□□□ -0.43
SYN3-213ENST00000619146 RC3H1Q5TC82 1133 aaKnown RBP12.35□□□□□ -0.43
SYN3-213ENST00000619146 ZNF530Q6P9A1 599 aaPredicted RBP12.35□□□□□ -0.43
SYN3-213ENST00000619146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.35□□□□□ -0.43
SYN3-213ENST00000619146 ADRA2BP18089 450 aa12.34□□□□□ -0.43
SYN3-213ENST00000619146 PRELPP51888 382 aa12.34□□□□□ -0.43
SYN3-213ENST00000619146 ERVV-2B6SEH9 535 aa12.33□□□□□ -0.44
SYN3-213ENST00000619146 AEBP1Q8IUX7 1158 aa12.33□□□□□ -0.44
SYN3-213ENST00000619146 NFATC2IPQ8NCF5 419 aa12.33□□□□□ -0.44
SYN3-213ENST00000619146 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
SYN3-213ENST00000619146 USP42Q9H9J4 1324 aaKnown RBP12.33□□□□□ -0.44
SYN3-213ENST00000619146 SLX4Q8IY92 1834 aa12.32□□□□□ -0.44
SYN3-213ENST00000619146 POLRMTO00411 1230 aaKnown RBP12.32□□□□□ -0.44
SYN3-213ENST00000619146 PPP2R1AP30153 589 aa12.32□□□□□ -0.44
SYN3-213ENST00000619146 MTHFSP49914 203 aa12.32□□□□□ -0.44
SYN3-213ENST00000619146 USPL1Q5W0Q7 1092 aa12.32□□□□□ -0.44
SYN3-213ENST00000619146 ZNF219Q9P2Y4 722 aaPredicted RBP12.32□□□□□ -0.44
SYN3-213ENST00000619146 PLEKHO1Q53GL0 409 aaPredicted RBP12.31□□□□□ -0.44
SYN3-213ENST00000619146 INTS5Q6P9B9 1019 aaKnown RBP12.3□□□□□ -0.44
SYN3-213ENST00000619146 DNAJC10Q8IXB1 793 aa12.3□□□□□ -0.44
SYN3-213ENST00000619146 MRS2Q9HD23 443 aa12.3□□□□□ -0.44
SYN3-213ENST00000619146 UBR2Q8IWV8 1755 aa12.3□□□□□ -0.44
SYN3-213ENST00000619146 CARMIL3Q8ND23 1372 aa12.3□□□□□ -0.44
SYN3-213ENST00000619146 ARFGEF2Q9Y6D5 1785 aa12.29□□□□□ -0.44
SYN3-213ENST00000619146 ZPR1O75312 459 aa12.29□□□□□ -0.44
SYN3-213ENST00000619146 HSP90AB1P08238 724 aaKnown RBP12.29□□□□□ -0.44
SYN3-213ENST00000619146 C1orf141Q5JVX7 400 aa12.29□□□□□ -0.44
SYN3-213ENST00000619146 BICDL1Q6ZP65 573 aa12.29□□□□□ -0.44
SYN3-213ENST00000619146 CCDC24Q8N4L8 307 aa12.29□□□□□ -0.44
SYN3-213ENST00000619146 VEGFAP15692 232 aaPredicted RBP12.28□□□□□ -0.44
SYN3-213ENST00000619146 TM4SF1P30408 202 aa12.28□□□□□ -0.44
SYN3-213ENST00000619146 SLC39A6Q13433 755 aa12.28□□□□□ -0.44
SYN3-213ENST00000619146 NFIXQ14938 502 aa12.28□□□□□ -0.44
SYN3-213ENST00000619146 CFAP53Q96M91 514 aa12.28□□□□□ -0.44
SYN3-213ENST00000619146 MKRN1Q9UHC7 482 aaKnown RBP12.28□□□□□ -0.44
SYN3-213ENST00000619146 GLTPD2A6NH11 291 aa12.27□□□□□ -0.45
SYN3-213ENST00000619146 LMNB1P20700 586 aa12.27□□□□□ -0.45
SYN3-213ENST00000619146 C2CD5Q86YS7 1000 aa12.27□□□□□ -0.45
SYN3-213ENST00000619146 SCN7AQ01118 1682 aa12.26□□□□□ -0.45
SYN3-213ENST00000619146 POTECB2RU33 542 aa12.26□□□□□ -0.45
SYN3-213ENST00000619146 SULT6B1Q6IMI4 303 aa12.26□□□□□ -0.45
SYN3-213ENST00000619146 LGR6Q9HBX8 967 aa12.26□□□□□ -0.45
SYN3-213ENST00000619146 SOS1Q07889 1333 aaPredicted RBP12.26□□□□□ -0.45
SYN3-213ENST00000619146 SCN4AP35499 1836 aa12.25□□□□□ -0.45
SYN3-213ENST00000619146 NFKBIEO00221 500 aa12.25□□□□□ -0.45
SYN3-213ENST00000619146 SERPINB2P05120 415 aa12.25□□□□□ -0.45
SYN3-213ENST00000619146 POTEIP0CG38 1075 aa12.25□□□□□ -0.45
SYN3-213ENST00000619146 POTEJP0CG39 1038 aa12.25□□□□□ -0.45
SYN3-213ENST00000619146 TTLL6Q8N841 843 aa12.25□□□□□ -0.45
SYN3-213ENST00000619146 ZBTB1Q9Y2K1 713 aa12.25□□□□□ -0.45
SYN3-213ENST00000619146 COL15A1P39059 1388 aa12.25□□□□□ -0.45
SYN3-213ENST00000619146 SIPA1L3O60292 1781 aaPredicted RBP12.25□□□□□ -0.45
SYN3-213ENST00000619146 CANXP27824 592 aaKnown RBP12.24□□□□□ -0.45
SYN3-213ENST00000619146 AMOTQ4VCS5 1084 aa12.24□□□□□ -0.45
SYN3-213ENST00000619146 BCORQ6W2J9 1755 aa12.24□□□□□ -0.45
SYN3-213ENST00000619146 ZNF622Q969S3 477 aaKnown RBP eCLIP12.24□□□□□ -0.45
SYN3-213ENST00000619146 BCL2L12Q9HB09 334 aa12.24□□□□□ -0.45
SYN3-213ENST00000619146 H0YIN7 160 aa12.23□□□□□ -0.45
SYN3-213ENST00000619146 C21orf2O43822 256 aa12.23□□□□□ -0.45
SYN3-213ENST00000619146 CYP19A1P11511 503 aaPredicted RBP12.23□□□□□ -0.45
SYN3-213ENST00000619146 CCDC184Q52MB2 194 aa12.23□□□□□ -0.45
SYN3-213ENST00000619146 PNISRQ8TF01 805 aaKnown RBP12.23□□□□□ -0.45
SYN3-213ENST00000619146 NARFQ9UHQ1 456 aa12.23□□□□□ -0.45
SYN3-213ENST00000619146 ZNF330Q9Y3S2 320 aaPredicted RBP12.23□□□□□ -0.45
SYN3-213ENST00000619146 FOXN1O15353 648 aa12.22□□□□□ -0.45
SYN3-213ENST00000619146 HMOX1P09601 288 aa12.22□□□□□ -0.45
SYN3-213ENST00000619146 ERFEQ4G0M1 354 aa12.22□□□□□ -0.45
SYN3-213ENST00000619146 TRPM7Q96QT4 1865 aa12.22□□□□□ -0.45
SYN3-213ENST00000619146 CASP8AP2Q9UKL3 1982 aa12.21□□□□□ -0.45
SYN3-213ENST00000619146 ZC3H4Q9UPT8 1303 aaKnown RBP12.21□□□□□ -0.45
SYN3-213ENST00000619146 DDNO94850 711 aaPredicted RBP12.21□□□□□ -0.45
SYN3-213ENST00000619146 WDR43Q15061 677 aaKnown RBP eCLIP12.21□□□□□ -0.45
SYN3-213ENST00000619146 SLC52A2Q9HAB3 445 aa12.21□□□□□ -0.45
SYN3-213ENST00000619146 NUDCQ9Y266 331 aa12.21□□□□□ -0.45
SYN3-213ENST00000619146 TBC1D9BQ66K14 1250 aa12.2□□□□□ -0.46
SYN3-213ENST00000619146 DPY19L2Q6NUT2 758 aa12.2□□□□□ -0.46
SYN3-213ENST00000619146 RNMTO43148 476 aaKnown RBP12.19□□□□□ -0.46
SYN3-213ENST00000619146 DIAPH1O60610 1272 aaKnown RBP12.19□□□□□ -0.46
SYN3-213ENST00000619146 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
SYN3-213ENST00000619146 MRC1P22897 1456 aa12.19□□□□□ -0.46
SYN3-213ENST00000619146 AKAP4Q5JQC9 854 aa12.18□□□□□ -0.46
SYN3-213ENST00000619146 TBC1D2BQ9UPU7 963 aa12.18□□□□□ -0.46
SYN3-213ENST00000619146 NPHP1O15259 732 aa12.17□□□□□ -0.46
SYN3-213ENST00000619146 IL13P35225 146 aa12.17□□□□□ -0.46
SYN3-213ENST00000619146 FAM9BQ8IZU0 186 aa12.17□□□□□ -0.46
SYN3-213ENST00000619146 CREBZFQ9NS37 354 aa12.17□□□□□ -0.46
SYN3-213ENST00000619146 NUP98P52948 1817 aa12.16□□□□□ -0.46
SYN3-213ENST00000619146 PIP4K2AP48426 406 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms