RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 GTF2E1P29083 439 aaPredicted RBP8.43□□□□□ -1.06
CUL3-216ENST00000617432 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.43□□□□□ -1.06
CUL3-216ENST00000617432 WDR62O43379 1518 aa8.42□□□□□ -1.06
CUL3-216ENST00000617432 CEP164Q9UPV0 1460 aa8.42□□□□□ -1.06
CUL3-216ENST00000617432 ZBBXA8MT70 800 aa8.42□□□□□ -1.06
CUL3-216ENST00000617432 ADH6P28332 368 aa8.42□□□□□ -1.06
CUL3-216ENST00000617432 IL2RAP01589 272 aa8.41□□□□□ -1.06
CUL3-216ENST00000617432 MCCD1P59942 119 aaPredicted RBP8.41□□□□□ -1.06
CUL3-216ENST00000617432 C4orf17Q53FE4 359 aa8.41□□□□□ -1.06
CUL3-216ENST00000617432 FIGNL1Q6PIW4 674 aa8.41□□□□□ -1.06
CUL3-216ENST00000617432 CRISPLD1Q9H336 500 aa8.41□□□□□ -1.06
CUL3-216ENST00000617432 AVENQ9NQS1 362 aaPredicted RBP8.41□□□□□ -1.06
CUL3-216ENST00000617432 HRH3Q9Y5N1 445 aa8.41□□□□□ -1.06
CUL3-216ENST00000617432 USP17L8P0C7I0 530 aa8.4□□□□□ -1.06
CUL3-216ENST00000617432 TMEM214Q6NUQ4 689 aaKnown RBP8.4□□□□□ -1.06
CUL3-216ENST00000617432 PROCA1Q8NCQ7 364 aaPredicted RBP8.4□□□□□ -1.06
CUL3-216ENST00000617432 RAB6BQ9NRW1 208 aa8.4□□□□□ -1.06
CUL3-216ENST00000617432 URB2Q14146 1524 aaKnown RBP8.39□□□□□ -1.07
CUL3-216ENST00000617432 SPDYE3A6NKU9 549 aa8.39□□□□□ -1.07
CUL3-216ENST00000617432 PRSS36Q5K4E3 855 aa8.39□□□□□ -1.07
CUL3-216ENST00000617432 XAGE2Q96GT9 111 aa8.39□□□□□ -1.07
CUL3-216ENST00000617432 PCDHB11Q9Y5F2 797 aa8.39□□□□□ -1.07
CUL3-216ENST00000617432 PCDHGC4Q9Y5F7 938 aa8.39□□□□□ -1.07
CUL3-216ENST00000617432 APBA3O96018 575 aa8.38□□□□□ -1.07
CUL3-216ENST00000617432 SH3D19Q5HYK7 790 aa8.38□□□□□ -1.07
CUL3-216ENST00000617432 FHDC1Q9C0D6 1143 aaPredicted RBP8.38□□□□□ -1.07
CUL3-216ENST00000617432 LRP8Q14114 963 aa8.37□□□□□ -1.07
CUL3-216ENST00000617432 PRRT3Q5FWE3 981 aa8.37□□□□□ -1.07
CUL3-216ENST00000617432 FAM182BQ5T319 152 aa8.37□□□□□ -1.07
CUL3-216ENST00000617432 FCHSD1Q86WN1 690 aa8.37□□□□□ -1.07
CUL3-216ENST00000617432 KLF15Q9UIH9 416 aa8.37□□□□□ -1.07
CUL3-216ENST00000617432 PRDM2Q13029 1718 aa8.37□□□□□ -1.07
CUL3-216ENST00000617432 ZNF592Q92610 1267 aa8.37□□□□□ -1.07
CUL3-216ENST00000617432 ZCCHC2Q9C0B9 1178 aaKnown RBP8.37□□□□□ -1.07
CUL3-216ENST00000617432 ATP1B4Q9UN42 357 aaPredicted RBP8.37□□□□□ -1.07
CUL3-216ENST00000617432 FBXO45P0C2W1 286 aa8.36□□□□□ -1.07
CUL3-216ENST00000617432 NLRP8Q86W28 1048 aa8.35□□□□□ -1.07
CUL3-216ENST00000617432 TRIM34Q9BYJ4 488 aa8.35□□□□□ -1.07
CUL3-216ENST00000617432 DNAAF2Q9NVR5 837 aaKnown RBP8.35□□□□□ -1.07
CUL3-216ENST00000617432 RHBDD1Q8TEB9 315 aa8.34□□□□□ -1.07
CUL3-216ENST00000617432 ATXN7O15265 892 aaPredicted RBP8.33□□□□□ -1.08
CUL3-216ENST00000617432 HYAL3O43820 417 aaPredicted RBP8.33□□□□□ -1.08
CUL3-216ENST00000617432 ESCO1Q5FWF5 840 aa8.33□□□□□ -1.08
CUL3-216ENST00000617432 NACC1Q96RE7 527 aa8.33□□□□□ -1.08
CUL3-216ENST00000617432 SUPT5HO00267 1087 aaKnown RBP8.32□□□□□ -1.08
CUL3-216ENST00000617432 PPARGC1BQ86YN6 1023 aaKnown RBP8.32□□□□□ -1.08
CUL3-216ENST00000617432 MYCP01106 439 aaPredicted RBP8.31□□□□□ -1.08
CUL3-216ENST00000617432 H2AFB1P0C5Y9 115 aa8.31□□□□□ -1.08
CUL3-216ENST00000617432 H2AFB2P0C5Z0 115 aa8.31□□□□□ -1.08
CUL3-216ENST00000617432 TNP2Q05952 138 aa8.31□□□□□ -1.08
CUL3-216ENST00000617432 TBC1D9Q6ZT07 1266 aa8.31□□□□□ -1.08
CUL3-216ENST00000617432 C1orf216Q8TAB5 229 aa8.31□□□□□ -1.08
CUL3-216ENST00000617432 MAPTP10636 758 aaKnown RBP8.3□□□□□ -1.08
CUL3-216ENST00000617432 TOPBP1Q92547 1522 aa8.3□□□□□ -1.08
CUL3-216ENST00000617432 ZNF468Q5VIY5 522 aaPredicted RBP8.29□□□□□ -1.08
CUL3-216ENST00000617432 ZNF608Q9ULD9 1512 aaPredicted RBP8.29□□□□□ -1.08
CUL3-216ENST00000617432 CD33P20138 364 aa8.29□□□□□ -1.08
CUL3-216ENST00000617432 ALAS2P22557 587 aa8.29□□□□□ -1.08
CUL3-216ENST00000617432 PCBP4P57723 403 aaKnown RBP8.29□□□□□ -1.08
CUL3-216ENST00000617432 HCN2Q9UL51 889 aa8.29□□□□□ -1.08
CUL3-216ENST00000617432 PRR12Q9ULL5 1215 aa8.29□□□□□ -1.08
CUL3-216ENST00000617432 ZNF330Q9Y3S2 320 aaPredicted RBP8.29□□□□□ -1.08
CUL3-216ENST00000617432 ELOA3CA0A087WX78 387 aaPredicted RBP8.28□□□□□ -1.08
CUL3-216ENST00000617432 ELOA3DA6NLF2 546 aaPredicted RBP8.28□□□□□ -1.08
CUL3-216ENST00000617432 ELOA3BQ3SY89 546 aa8.28□□□□□ -1.08
CUL3-216ENST00000617432 ELOA3Q8NG57 546 aa8.28□□□□□ -1.08
CUL3-216ENST00000617432 DCDC2BA2VCK2 349 aa8.27□□□□□ -1.09
CUL3-216ENST00000617432 RFC5P40937 340 aa8.27□□□□□ -1.09
CUL3-216ENST00000617432 NR1H3Q13133 447 aa8.27□□□□□ -1.09
CUL3-216ENST00000617432 TRIM28Q13263 835 aaKnown RBP8.27□□□□□ -1.09
CUL3-216ENST00000617432 SLC24A3Q9HC58 644 aa8.27□□□□□ -1.09
CUL3-216ENST00000617432 DNMBPQ6XZF7 1577 aa8.26□□□□□ -1.09
CUL3-216ENST00000617432 KHNYNO15037 678 aaKnown RBP8.26□□□□□ -1.09
CUL3-216ENST00000617432 PLA2G4AP47712 749 aa8.26□□□□□ -1.09
CUL3-216ENST00000617432 ATP4AP20648 1035 aa8.25□□□□□ -1.09
CUL3-216ENST00000617432 MCTP1Q6DN14 999 aa8.25□□□□□ -1.09
CUL3-216ENST00000617432 PRDM6Q9NQX0 595 aa8.25□□□□□ -1.09
CUL3-216ENST00000617432 A0A1W2PNR3 127 aa8.24□□□□□ -1.09
CUL3-216ENST00000617432 TLR1Q15399 786 aa8.24□□□□□ -1.09
CUL3-216ENST00000617432 EIF4G3O43432 1585 aaKnown RBP8.24□□□□□ -1.09
CUL3-216ENST00000617432 C9orf172C9J069 976 aa8.23□□□□□ -1.09
CUL3-216ENST00000617432 FAM229AH3BQW9 127 aa8.23□□□□□ -1.09
CUL3-216ENST00000617432 FAM157BP0CG42 384 aa8.23□□□□□ -1.09
CUL3-216ENST00000617432 DDRGK1Q96HY6 314 aa8.23□□□□□ -1.09
CUL3-216ENST00000617432 MDFIQ99750 246 aa8.23□□□□□ -1.09
CUL3-216ENST00000617432 POLA1P09884 1462 aaPredicted RBP8.23□□□□□ -1.09
CUL3-216ENST00000617432 IFT140Q96RY7 1462 aa8.23□□□□□ -1.09
CUL3-216ENST00000617432 RAD54L2Q9Y4B4 1467 aa8.23□□□□□ -1.09
CUL3-216ENST00000617432 CUX1P39880 1505 aa8.23□□□□□ -1.09
CUL3-216ENST00000617432 TARBP1Q13395 1621 aaKnown RBP8.23□□□□□ -1.09
CUL3-216ENST00000617432 COL9A3Q14050 684 aaPredicted RBP8.22□□□□□ -1.09
CUL3-216ENST00000617432 TMEM259Q4ZIN3 620 aa8.22□□□□□ -1.09
CUL3-216ENST00000617432 AIDAQ96BJ3 306 aa8.22□□□□□ -1.09
CUL3-216ENST00000617432 CDCA7Q9BWT1 371 aaPredicted RBP8.22□□□□□ -1.09
CUL3-216ENST00000617432 MARK1Q9P0L2 795 aa8.22□□□□□ -1.09
CUL3-216ENST00000617432 COBLO75128 1261 aa8.21□□□□□ -1.09
CUL3-216ENST00000617432 TXKP42681 527 aa8.21□□□□□ -1.09
CUL3-216ENST00000617432 LAMC2Q13753 1193 aa8.21□□□□□ -1.09
CUL3-216ENST00000617432 GRIK4Q16099 956 aa8.21□□□□□ -1.09
CUL3-216ENST00000617432 ARSJQ5FYB0 599 aaPredicted RBP8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms