RNA–Protein interactions for RNA: ENST00000616386.1

PVT1-224, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 113 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-224ENST00000616386 IFNL2Q8IZJ0 200 aa3.35□□□□□ -1.87
PVT1-224ENST00000616386 STAC3Q96MF2 364 aa3.35□□□□□ -1.87
PVT1-224ENST00000616386 CARD11Q9BXL7 1154 aa3.35□□□□□ -1.87
PVT1-224ENST00000616386 TAOK3Q9H2K8 898 aa3.35□□□□□ -1.87
PVT1-224ENST00000616386 TAF1DQ9H5J8 278 aaPredicted RBP3.35□□□□□ -1.87
PVT1-224ENST00000616386 ZNF277Q9NRM2 450 aaPredicted RBP3.35□□□□□ -1.87
PVT1-224ENST00000616386 HACL1Q9UJ83 578 aa3.35□□□□□ -1.87
PVT1-224ENST00000616386 EMILIN1Q9Y6C2 1016 aa3.35□□□□□ -1.87
PVT1-224ENST00000616386 A0A1W2PP64 1363 aa3.35□□□□□ -1.87
PVT1-224ENST00000616386 USP31Q70CQ4 1352 aa3.35□□□□□ -1.87
PVT1-224ENST00000616386 TNRC6CQ9HCJ0 1690 aaKnown RBP3.34□□□□□ -1.87
PVT1-224ENST00000616386 COL24A1Q17RW2 1714 aa3.34□□□□□ -1.87
PVT1-224ENST00000616386 PKD1L3Q7Z443 1732 aa3.34□□□□□ -1.87
PVT1-224ENST00000616386 TOGARAM1Q9Y4F4 1720 aa3.34□□□□□ -1.87
PVT1-224ENST00000616386 ST20-MTHFSA0A0A6YYL1 179 aa3.34□□□□□ -1.87
PVT1-224ENST00000616386 PHKG2P15735 406 aa3.34□□□□□ -1.87
PVT1-224ENST00000616386 ADRA2BP18089 450 aa3.34□□□□□ -1.87
PVT1-224ENST00000616386 LMOD1P29536 600 aaPredicted RBP3.34□□□□□ -1.87
PVT1-224ENST00000616386 ECE1P42892 770 aa3.34□□□□□ -1.87
PVT1-224ENST00000616386 MTHFSP49914 203 aa3.34□□□□□ -1.87
PVT1-224ENST00000616386 SLC39A6Q13433 755 aa3.34□□□□□ -1.87
PVT1-224ENST00000616386 CIAPIN1Q6FI81 312 aa3.34□□□□□ -1.87
PVT1-224ENST00000616386 ZNF530Q6P9A1 599 aaPredicted RBP3.34□□□□□ -1.87
PVT1-224ENST00000616386 NPM2Q86SE8 214 aaKnown RBP3.34□□□□□ -1.87
PVT1-224ENST00000616386 DNAJC10Q8IXB1 793 aa3.34□□□□□ -1.87
PVT1-224ENST00000616386 SYNE4Q8N205 404 aa3.34□□□□□ -1.87
PVT1-224ENST00000616386 NFATC2IPQ8NCF5 419 aa3.34□□□□□ -1.87
PVT1-224ENST00000616386 CGNL1Q0VF96 1302 aa3.34□□□□□ -1.87
PVT1-224ENST00000616386 ZNF541Q9H0D2 1346 aa3.34□□□□□ -1.87
PVT1-224ENST00000616386 USP42Q9H9J4 1324 aaKnown RBP3.34□□□□□ -1.87
PVT1-224ENST00000616386 USP54Q70EL1 1684 aa3.33□□□□□ -1.88
PVT1-224ENST00000616386 C4AP0C0L4 1744 aa3.33□□□□□ -1.88
PVT1-224ENST00000616386 UBR3Q6ZT12 1888 aa3.33□□□□□ -1.88
PVT1-224ENST00000616386 CELF2O95319 508 aaKnown RBP3.33□□□□□ -1.88
PVT1-224ENST00000616386 ITGBL1O95965 494 aaPredicted RBP3.33□□□□□ -1.88
PVT1-224ENST00000616386 TM4SF1P30408 202 aa3.33□□□□□ -1.88
PVT1-224ENST00000616386 C1orf141Q5JVX7 400 aa3.33□□□□□ -1.88
PVT1-224ENST00000616386 RC3H1Q5TC82 1133 aaKnown RBP3.33□□□□□ -1.88
PVT1-224ENST00000616386 DLK2Q6UY11 383 aa3.33□□□□□ -1.88
PVT1-224ENST00000616386 EYA1Q99502 592 aa3.33□□□□□ -1.88
PVT1-224ENST00000616386 DDX21Q9NR30 783 aaKnown RBP eCLIP3.33□□□□□ -1.88
PVT1-224ENST00000616386 TBC1D2BQ9UPU7 963 aa3.33□□□□□ -1.88
PVT1-224ENST00000616386 PASKQ96RG2 1323 aa3.33□□□□□ -1.88
PVT1-224ENST00000616386 CARMIL3Q8ND23 1372 aa3.33□□□□□ -1.88
PVT1-224ENST00000616386 PCNTO95613 3336 aa3.33□□□□□ -1.88
PVT1-224ENST00000616386 EDC4Q6P2E9 1401 aaKnown RBP3.33□□□□□ -1.88
PVT1-224ENST00000616386 CD163L1Q9NR16 1453 aa3.33□□□□□ -1.88
PVT1-224ENST00000616386 TAF1LQ8IZX4 1826 aa3.33□□□□□ -1.88
PVT1-224ENST00000616386 RASSF10A6NK89 507 aa3.32□□□□□ -1.88
PVT1-224ENST00000616386 DLL1O00548 723 aa3.32□□□□□ -1.88
PVT1-224ENST00000616386 FYB1O15117 783 aa3.32□□□□□ -1.88
PVT1-224ENST00000616386 TRPA1O75762 1119 aa3.32□□□□□ -1.88
PVT1-224ENST00000616386 MYCP01106 439 aaPredicted RBP3.32□□□□□ -1.88
PVT1-224ENST00000616386 GTF2E1P29083 439 aaPredicted RBP3.32□□□□□ -1.88
PVT1-224ENST00000616386 PDE6BP35913 854 aa3.32□□□□□ -1.88
PVT1-224ENST00000616386 EPS15P42566 896 aa3.32□□□□□ -1.88
PVT1-224ENST00000616386 PIP4K2AP48426 406 aaPredicted RBP3.32□□□□□ -1.88
PVT1-224ENST00000616386 RGS19P49795 217 aa3.32□□□□□ -1.88
PVT1-224ENST00000616386 EIF6P56537 245 aaKnown RBP3.32□□□□□ -1.88
PVT1-224ENST00000616386 ST5P78524 1137 aa3.32□□□□□ -1.88
PVT1-224ENST00000616386 PLEKHO1Q53GL0 409 aaPredicted RBP3.32□□□□□ -1.88
PVT1-224ENST00000616386 RBM26Q5T8P6 1007 aaKnown RBP3.32□□□□□ -1.88
PVT1-224ENST00000616386 PRPF38BQ5VTL8 546 aaKnown RBP3.32□□□□□ -1.88
PVT1-224ENST00000616386 TBC1D9BQ66K14 1250 aa3.32□□□□□ -1.88
PVT1-224ENST00000616386 PRPF40BQ6NWY9 871 aaKnown RBP3.32□□□□□ -1.88
PVT1-224ENST00000616386 INTS5Q6P9B9 1019 aaKnown RBP3.32□□□□□ -1.88
PVT1-224ENST00000616386 NBPF15Q8N660 670 aa3.32□□□□□ -1.88
PVT1-224ENST00000616386 JDP2Q8WYK2 163 aa3.32□□□□□ -1.88
PVT1-224ENST00000616386 ZIC5Q96T25 663 aa3.32□□□□□ -1.88
PVT1-224ENST00000616386 GLIS2Q9BZE0 524 aaPredicted RBP3.32□□□□□ -1.88
PVT1-224ENST00000616386 ZBTB1Q9Y2K1 713 aa3.32□□□□□ -1.88
PVT1-224ENST00000616386 CNTNAP4Q9C0A0 1308 aa3.32□□□□□ -1.88
PVT1-224ENST00000616386 ZC3H4Q9UPT8 1303 aaKnown RBP3.32□□□□□ -1.88
PVT1-224ENST00000616386 TIAM2Q8IVF5 1701 aa3.31□□□□□ -1.88
PVT1-224ENST00000616386 KIAA1551Q9HCM1 1747 aa3.31□□□□□ -1.88
PVT1-224ENST00000616386 FAM208AQ9UK61 1670 aaKnown RBP3.31□□□□□ -1.88
PVT1-224ENST00000616386 FLT4P35916 1363 aa3.31□□□□□ -1.88
PVT1-224ENST00000616386 ERVV-2B6SEH9 535 aa3.31□□□□□ -1.88
PVT1-224ENST00000616386 MKRN3Q13064 507 aaKnown RBP3.31□□□□□ -1.88
PVT1-224ENST00000616386 NKX1-1Q15270 411 aaPredicted RBP3.31□□□□□ -1.88
PVT1-224ENST00000616386 CCDC93Q567U6 631 aa3.31□□□□□ -1.88
PVT1-224ENST00000616386 CST9Q5W186 159 aa3.31□□□□□ -1.88
PVT1-224ENST00000616386 PNMA8AQ86V59 439 aaPredicted RBP3.31□□□□□ -1.88
PVT1-224ENST00000616386 NBPF5PQ86XG9 351 aaPredicted RBP3.31□□□□□ -1.88
PVT1-224ENST00000616386 AEBP1Q8IUX7 1158 aa3.31□□□□□ -1.88
PVT1-224ENST00000616386 NGEFQ8N5V2 710 aa3.31□□□□□ -1.88
PVT1-224ENST00000616386 CNBD1Q8NA66 436 aa3.31□□□□□ -1.88
PVT1-224ENST00000616386 CNKSR1Q969H4 720 aa3.31□□□□□ -1.88
PVT1-224ENST00000616386 ZNF428Q96B54 188 aa3.31□□□□□ -1.88
PVT1-224ENST00000616386 SETDB2Q96T68 719 aa3.31□□□□□ -1.88
PVT1-224ENST00000616386 BCL2L13Q9BXK5 485 aa3.31□□□□□ -1.88
PVT1-224ENST00000616386 NARFQ9UHQ1 456 aa3.31□□□□□ -1.88
PVT1-224ENST00000616386 HDAC9Q9UKV0 1011 aa3.31□□□□□ -1.88
PVT1-224ENST00000616386 CCDC88AQ3V6T2 1871 aa3.3□□□□□ -1.88
PVT1-224ENST00000616386 ITGB4P16144 1822 aa3.3□□□□□ -1.88
PVT1-224ENST00000616386 INSRP06213 1382 aa3.3□□□□□ -1.88
PVT1-224ENST00000616386 COL15A1P39059 1388 aa3.3□□□□□ -1.88
PVT1-224ENST00000616386 SOS1Q07889 1333 aaPredicted RBP3.3□□□□□ -1.88
PVT1-224ENST00000616386 ECM2O94769 699 aaPredicted RBP3.3□□□□□ -1.88
PVT1-224ENST00000616386 HSP90AB1P08238 724 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms