RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 CCDC172P0C7W6 258 aa15.79■□□□□ 0.12
PPP4R3B-205ENST00000616288 DNAJC21Q5F1R6 531 aaKnown RBP15.79■□□□□ 0.12
PPP4R3B-205ENST00000616288 NECAB1Q8N987 351 aa15.79■□□□□ 0.12
PPP4R3B-205ENST00000616288 PPP6R1Q9UPN7 881 aa15.79■□□□□ 0.12
PPP4R3B-205ENST00000616288 AK9Q5TCS8 1911 aa15.79■□□□□ 0.12
PPP4R3B-205ENST00000616288 CTIFO43310 598 aaKnown RBP15.79■□□□□ 0.12
PPP4R3B-205ENST00000616288 ERLIN2O94905 339 aa15.79■□□□□ 0.12
PPP4R3B-205ENST00000616288 TSR1Q2NL82 804 aaKnown RBP15.79■□□□□ 0.12
PPP4R3B-205ENST00000616288 AOPEPQ8N6M6 819 aa15.79■□□□□ 0.12
PPP4R3B-205ENST00000616288 PLEKHA4Q9H4M7 779 aa15.79■□□□□ 0.12
PPP4R3B-205ENST00000616288 TERF2IPQ9NYB0 399 aa15.79■□□□□ 0.12
PPP4R3B-205ENST00000616288 ZDHHC9Q9Y397 364 aa15.79■□□□□ 0.12
PPP4R3B-205ENST00000616288 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.79■□□□□ 0.122e-6■■□□□ 12.7
PPP4R3B-205ENST00000616288 SMARCE1Q969G3 411 aa15.79■□□□□ 0.12
PPP4R3B-205ENST00000616288 GEMIN8Q9NWZ8 242 aaKnown RBP15.79■□□□□ 0.12
PPP4R3B-205ENST00000616288 PUF60Q9UHX1 559 aaKnown RBP15.79■□□□□ 0.12
PPP4R3B-205ENST00000616288 STX1AQ16623 288 aa15.78■□□□□ 0.12
PPP4R3B-205ENST00000616288 CCDC9Q9Y3X0 531 aaKnown RBP15.78■□□□□ 0.12
PPP4R3B-205ENST00000616288 HDGFL2Q7Z4V5 671 aaPredicted RBP15.78■□□□□ 0.12
PPP4R3B-205ENST00000616288 NAA25Q14CX7 972 aa15.78■□□□□ 0.12
PPP4R3B-205ENST00000616288 EHBP1L1Q8N3D4 1523 aa15.78■□□□□ 0.12
PPP4R3B-205ENST00000616288 CFAP70Q5T0N1 1121 aa15.77■□□□□ 0.12
PPP4R3B-205ENST00000616288 THOC2Q8NI27 1593 aaKnown RBP15.77■□□□□ 0.12
PPP4R3B-205ENST00000616288 SURF6O75683 361 aaKnown RBP15.77■□□□□ 0.12
PPP4R3B-205ENST00000616288 TOP1P11387 765 aaKnown RBP15.77■□□□□ 0.12
PPP4R3B-205ENST00000616288 PPP2R3AQ06190 1150 aa15.77■□□□□ 0.12
PPP4R3B-205ENST00000616288 RPAP2Q8IXW5 612 aaPredicted RBP15.77■□□□□ 0.12
PPP4R3B-205ENST00000616288 CNTROBQ8N137 903 aa15.77■□□□□ 0.12
PPP4R3B-205ENST00000616288 INTS4Q96HW7 963 aaKnown RBP15.77■□□□□ 0.12
PPP4R3B-205ENST00000616288 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.12
PPP4R3B-205ENST00000616288 ACTN2P35609 894 aa15.77■□□□□ 0.11
PPP4R3B-205ENST00000616288 STK38Q15208 465 aa15.77■□□□□ 0.11
PPP4R3B-205ENST00000616288 KCNF1Q9H3M0 494 aa15.77■□□□□ 0.11
PPP4R3B-205ENST00000616288 CFAP45Q9UL16 551 aa15.77■□□□□ 0.11
PPP4R3B-205ENST00000616288 SCAPERQ9BY12 1400 aa15.77■□□□□ 0.11
PPP4R3B-205ENST00000616288 EFCAB5A4FU69 1503 aa15.77■□□□□ 0.11
PPP4R3B-205ENST00000616288 RHOXF2BP0C7M4 288 aa15.77■□□□□ 0.11
PPP4R3B-205ENST00000616288 SYNE3Q6ZMZ3 975 aa15.77■□□□□ 0.11
PPP4R3B-205ENST00000616288 RHOXF2Q9BQY4 288 aa15.77■□□□□ 0.11
PPP4R3B-205ENST00000616288 MPHOSPH10O00566 681 aaKnown RBP15.76■□□□□ 0.11
PPP4R3B-205ENST00000616288 CCDC150Q8NCX0 1101 aa15.76■□□□□ 0.11
PPP4R3B-205ENST00000616288 ABCC5O15440 1437 aa15.76■□□□□ 0.11
PPP4R3B-205ENST00000616288 IPO7O95373 1038 aaKnown RBP15.76■□□□□ 0.11
PPP4R3B-205ENST00000616288 GOLGA1Q92805 767 aa15.76■□□□□ 0.11
PPP4R3B-205ENST00000616288 SSBP05455 408 aaKnown RBP eCLIP15.75■□□□□ 0.11
PPP4R3B-205ENST00000616288 ZSCAN31Q96LW9 406 aaPredicted RBP15.75■□□□□ 0.11
PPP4R3B-205ENST00000616288 POLA1P09884 1462 aaPredicted RBP15.75■□□□□ 0.11
PPP4R3B-205ENST00000616288 ATP2C2O75185 946 aa15.75■□□□□ 0.11
PPP4R3B-205ENST00000616288 PRPF40BQ6NWY9 871 aaKnown RBP15.75■□□□□ 0.11
PPP4R3B-205ENST00000616288 SPG7Q9UQ90 795 aa15.75■□□□□ 0.11
PPP4R3B-205ENST00000616288 CAMSAP2Q08AD1 1489 aa15.75■□□□□ 0.11
PPP4R3B-205ENST00000616288 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.75■□□□□ 0.11
PPP4R3B-205ENST00000616288 NUTM1Q86Y26 1132 aa15.75■□□□□ 0.11
PPP4R3B-205ENST00000616288 SIL1Q9H173 461 aa15.75■□□□□ 0.11
PPP4R3B-205ENST00000616288 BCCIPQ9P287 314 aaKnown RBP eCLIP15.75■□□□□ 0.11
PPP4R3B-205ENST00000616288 KDM5CP41229 1560 aa15.75■□□□□ 0.11
PPP4R3B-205ENST00000616288 PSMA5P28066 241 aa15.75■□□□□ 0.11
PPP4R3B-205ENST00000616288 ST5P78524 1137 aa15.75■□□□□ 0.11
PPP4R3B-205ENST00000616288 HSP90AA4PQ58FG1 418 aa15.75■□□□□ 0.11
PPP4R3B-205ENST00000616288 OTUD6BQ8N6M0 293 aa15.75■□□□□ 0.11
PPP4R3B-205ENST00000616288 UTP14AQ9BVJ6 771 aaKnown RBP15.74■□□□□ 0.11
PPP4R3B-205ENST00000616288 LRRC8AQ8IWT6 810 aa15.74■□□□□ 0.11
PPP4R3B-205ENST00000616288 CBFA2T2O43439 604 aa15.74■□□□□ 0.11
PPP4R3B-205ENST00000616288 CXorf56Q9H5V9 222 aa15.74■□□□□ 0.11
PPP4R3B-205ENST00000616288 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.74■□□□□ 0.11
PPP4R3B-205ENST00000616288 CPSF2Q9P2I0 782 aaKnown RBP15.74■□□□□ 0.11
PPP4R3B-205ENST00000616288 RTEL1-TNFRSF6BF6WH68 1400 aa15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 GSPT1P15170 499 aaKnown RBP15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 INPP5BP32019 993 aa15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 FBXO18Q8NFZ0 1043 aa15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 ESYT1Q9BSJ8 1104 aa15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 KIF5CO60282 957 aa15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 CYP2E1P05181 493 aaPredicted RBP15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 IFIT2P09913 472 aaKnown RBP15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 ALDH1L2Q3SY69 923 aa15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 SCLT1Q96NL6 688 aa15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 IFNKQ9P0W0 207 aa15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 FRMD3A2A2Y4 597 aa15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 PPFIA3O75145 1194 aa15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 CPA1P15085 419 aa15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 MAGEA9P43362 315 aa15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 ARID5BQ14865 1188 aa15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 KARSQ15046 597 aaKnown RBP15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 MCTP2Q6DN12 878 aa15.73■□□□□ 0.11
PPP4R3B-205ENST00000616288 CAVIN2O95810 425 aa15.72■□□□□ 0.11
PPP4R3B-205ENST00000616288 LMOD1P29536 600 aaPredicted RBP15.72■□□□□ 0.11
PPP4R3B-205ENST00000616288 CLNS1AP54105 237 aaKnown RBP15.72■□□□□ 0.11
PPP4R3B-205ENST00000616288 HDXQ7Z353 690 aa15.72■□□□□ 0.11
PPP4R3B-205ENST00000616288 CPLX3Q8WVH0 158 aa15.72■□□□□ 0.11
PPP4R3B-205ENST00000616288 SLC24A3Q9HC58 644 aa15.72■□□□□ 0.11
PPP4R3B-205ENST00000616288 SRGAP3O43295 1099 aa15.72■□□□□ 0.11
PPP4R3B-205ENST00000616288 BLOC1S2Q6QNY1 142 aa15.72■□□□□ 0.11
PPP4R3B-205ENST00000616288 TCEANC2Q96MN5 208 aa15.72■□□□□ 0.11
PPP4R3B-205ENST00000616288 EIF3CLB5ME19 914 aaKnown RBP15.72■□□□□ 0.11
PPP4R3B-205ENST00000616288 MEX3CQ5U5Q3 659 aaKnown RBP15.72■□□□□ 0.11
PPP4R3B-205ENST00000616288 PPFIBP1Q86W92 1011 aa15.72■□□□□ 0.11
PPP4R3B-205ENST00000616288 STK11IPQ8N1F8 1099 aa15.72■□□□□ 0.11
PPP4R3B-205ENST00000616288 FSIP1Q8NA03 581 aa15.72■□□□□ 0.11
PPP4R3B-205ENST00000616288 ZNF396Q96N95 335 aaPredicted RBP15.72■□□□□ 0.11
PPP4R3B-205ENST00000616288 EIF3CQ99613 913 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms