RNA–Protein interactions for RNA: ENST00000615597.1

TMEM106C-222, Transcript of transmembrane protein 106C, human

TSL 2

Gene TMEM106C, Length 685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM106C-222	ENST00000615597	COL23A1	Q86Y22	540 aa	Predicted RBP	10.15	□□□□□ -0.78
TMEM106C-222	ENST00000615597	SCN11A	Q9UI33	1791 aa		10.15	□□□□□ -0.78
TMEM106C-222	ENST00000615597	MRC1	P22897	1456 aa		10.15	□□□□□ -0.78
TMEM106C-222	ENST00000615597	CD44	P16070	742 aa	Known RBP	10.14	□□□□□ -0.79
TMEM106C-222	ENST00000615597	SSFA2	P28290	1259 aa		10.14	□□□□□ -0.79
TMEM106C-222	ENST00000615597	RC3H1	Q5TC82	1133 aa	Known RBP	10.14	□□□□□ -0.79
TMEM106C-222	ENST00000615597	MSL1	Q68DK7	614 aa		10.14	□□□□□ -0.79
TMEM106C-222	ENST00000615597	SLC4A9	Q96Q91	983 aa		10.14	□□□□□ -0.79
TMEM106C-222	ENST00000615597	GABBR2	O75899	941 aa		10.13	□□□□□ -0.79
TMEM106C-222	ENST00000615597	CABP4	P57796	275 aa		10.13	□□□□□ -0.79
TMEM106C-222	ENST00000615597	FSTL1	Q12841	308 aa		10.13	□□□□□ -0.79
TMEM106C-222	ENST00000615597	ITPK1	Q13572	414 aa		10.13	□□□□□ -0.79
TMEM106C-222	ENST00000615597	LINC00116	Q8NCU8	138 aa		10.13	□□□□□ -0.79
TMEM106C-222	ENST00000615597	CFAP44	Q96MT7	982 aa		10.13	□□□□□ -0.79
TMEM106C-222	ENST00000615597	CNTNAP4	Q9C0A0	1308 aa		10.12	□□□□□ -0.79
TMEM106C-222	ENST00000615597	RNMT	O43148	476 aa	Known RBP	10.12	□□□□□ -0.79
TMEM106C-222	ENST00000615597	HMOX1	P09601	288 aa		10.12	□□□□□ -0.79
TMEM106C-222	ENST00000615597	PPP2R1A	P30153	589 aa		10.12	□□□□□ -0.79
TMEM106C-222	ENST00000615597	ATP6V1A	P38606	617 aa		10.12	□□□□□ -0.79
TMEM106C-222	ENST00000615597	MTHFSD	Q2M296	383 aa	Known RBP	10.12	□□□□□ -0.79
TMEM106C-222	ENST00000615597	AMIGO3	Q86WK7	504 aa		10.12	□□□□□ -0.79
TMEM106C-222	ENST00000615597	NFATC2IP	Q8NCF5	419 aa		10.12	□□□□□ -0.79
TMEM106C-222	ENST00000615597	SLC52A2	Q9HAB3	445 aa		10.12	□□□□□ -0.79
TMEM106C-222	ENST00000615597	COL5A3	P25940	1745 aa	Predicted RBP	10.12	□□□□□ -0.79
TMEM106C-222	ENST00000615597	TNRC18	O15417	2968 aa	Predicted RBP	10.11	□□□□□ -0.79
TMEM106C-222	ENST00000615597	AK7	Q96M32	723 aa		10.11	□□□□□ -0.79
TMEM106C-222	ENST00000615597	LGR6	Q9HBX8	967 aa		10.11	□□□□□ -0.79
TMEM106C-222	ENST00000615597	PRDM10	Q9NQV6	1147 aa		10.11	□□□□□ -0.79
TMEM106C-222	ENST00000615597	MYH14	Q7Z406	1995 aa	Known RBP	10.1	□□□□□ -0.79
TMEM106C-222	ENST00000615597	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.1	□□□□□ -0.79
TMEM106C-222	ENST00000615597	FCHSD2	O94868	740 aa		10.1	□□□□□ -0.79
TMEM106C-222	ENST00000615597	RGS19	P49795	217 aa		10.1	□□□□□ -0.79
TMEM106C-222	ENST00000615597	GAS2L2	Q8NHY3	880 aa		10.1	□□□□□ -0.79
TMEM106C-222	ENST00000615597	CFAP53	Q96M91	514 aa		10.1	□□□□□ -0.79
TMEM106C-222	ENST00000615597	RSPH6A	Q9H0K4	717 aa		10.1	□□□□□ -0.79
TMEM106C-222	ENST00000615597	CEMIP	Q8WUJ3	1361 aa		10.1	□□□□□ -0.79
TMEM106C-222	ENST00000615597	VIRMA	Q69YN4	1812 aa	Known RBP	10.1	□□□□□ -0.79
TMEM106C-222	ENST00000615597	RPS6KA4	O75676	772 aa		10.09	□□□□□ -0.79
TMEM106C-222	ENST00000615597	CLCN6	P51797	869 aa		10.09	□□□□□ -0.79
TMEM106C-222	ENST00000615597	VSIG10	Q8N0Z9	540 aa		10.09	□□□□□ -0.79
TMEM106C-222	ENST00000615597	NUDC	Q9Y266	331 aa		10.09	□□□□□ -0.79
TMEM106C-222	ENST00000615597	LBX1	P52954	281 aa		10.08	□□□□□ -0.8
TMEM106C-222	ENST00000615597	MKRN1	Q9UHC7	482 aa	Known RBP	10.08	□□□□□ -0.8
TMEM106C-222	ENST00000615597	RTCB	Q9Y3I0	505 aa	Known RBP	10.08	□□□□□ -0.8
TMEM106C-222	ENST00000615597	CD2AP	Q9Y5K6	639 aa		10.08	□□□□□ -0.8
TMEM106C-222	ENST00000615597	UBR2	Q8IWV8	1755 aa		10.07	□□□□□ -0.8
TMEM106C-222	ENST00000615597	GNAT3	A8MTJ3	354 aa		10.07	□□□□□ -0.8
TMEM106C-222	ENST00000615597	U2SURP	O15042	1029 aa	Known RBP	10.07	□□□□□ -0.8
TMEM106C-222	ENST00000615597	GNPAT	O15228	680 aa		10.07	□□□□□ -0.8
TMEM106C-222	ENST00000615597	TRAPPC3L	Q5T215	181 aa		10.07	□□□□□ -0.8
TMEM106C-222	ENST00000615597	IL17RE	Q8NFR9	667 aa		10.07	□□□□□ -0.8
TMEM106C-222	ENST00000615597	RRAGC	Q9HB90	399 aa		10.07	□□□□□ -0.8
TMEM106C-222	ENST00000615597	TJP1	Q07157	1748 aa		10.07	□□□□□ -0.8
TMEM106C-222	ENST00000615597	KCP	Q6ZWJ8	1503 aa		10.07	□□□□□ -0.8
TMEM106C-222	ENST00000615597	SIPA1L3	O60292	1781 aa	Predicted RBP	10.06	□□□□□ -0.8
TMEM106C-222	ENST00000615597	HTATSF1	O43719	755 aa	Known RBP	10.06	□□□□□ -0.8
TMEM106C-222	ENST00000615597	PRKAR2B	P31323	418 aa		10.06	□□□□□ -0.8
TMEM106C-222	ENST00000615597	CTCF	P49711	727 aa	Predicted RBP	10.06	□□□□□ -0.8
TMEM106C-222	ENST00000615597	RALBP1	Q15311	655 aa		10.06	□□□□□ -0.8
TMEM106C-222	ENST00000615597	ARHGEF1	Q92888	912 aa	Known RBP	10.06	□□□□□ -0.8
TMEM106C-222	ENST00000615597	PHACTR3	Q96KR7	559 aa		10.06	□□□□□ -0.8
TMEM106C-222	ENST00000615597	PTCD1	O75127	700 aa	Known RBP	10.05	□□□□□ -0.8
TMEM106C-222	ENST00000615597	CRKL	P46109	303 aa	Known RBP	10.05	□□□□□ -0.8
TMEM106C-222	ENST00000615597	INTS5	Q6P9B9	1019 aa	Known RBP	10.05	□□□□□ -0.8
TMEM106C-222	ENST00000615597	NLGN1	Q8N2Q7	840 aa		10.05	□□□□□ -0.8
TMEM106C-222	ENST00000615597	SMC1B	Q8NDV3	1235 aa		10.05	□□□□□ -0.8
TMEM106C-222	ENST00000615597	CREBZF	Q9NS37	354 aa		10.05	□□□□□ -0.8
TMEM106C-222	ENST00000615597	PHF14	O94880	888 aa		10.04	□□□□□ -0.8
TMEM106C-222	ENST00000615597	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.04	□□□□□ -0.8
TMEM106C-222	ENST00000615597	CYP19A1	P11511	503 aa	Predicted RBP	10.04	□□□□□ -0.8
TMEM106C-222	ENST00000615597	GYS1	P13807	737 aa		10.04	□□□□□ -0.8
TMEM106C-222	ENST00000615597	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
TMEM106C-222	ENST00000615597	ZNF790	Q6PG37	636 aa		10.04	□□□□□ -0.8
TMEM106C-222	ENST00000615597	SMIM5	Q71RC9	77 aa		10.04	□□□□□ -0.8
TMEM106C-222	ENST00000615597	AIDA	Q96BJ3	306 aa		10.04	□□□□□ -0.8
TMEM106C-222	ENST00000615597	PLEKHF1	Q96S99	279 aa		10.04	□□□□□ -0.8
TMEM106C-222	ENST00000615597	KIF13B	Q9NQT8	1826 aa		10.04	□□□□□ -0.8
TMEM106C-222	ENST00000615597	C4A	P0C0L4	1744 aa		10.03	□□□□□ -0.8
TMEM106C-222	ENST00000615597	SLC39A6	Q13433	755 aa		10.03	□□□□□ -0.8
TMEM106C-222	ENST00000615597	DNAJC10	Q8IXB1	793 aa		10.03	□□□□□ -0.8
TMEM106C-222	ENST00000615597	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.03	□□□□□ -0.8
TMEM106C-222	ENST00000615597	SOS1	Q07889	1333 aa	Predicted RBP	10.03	□□□□□ -0.8
TMEM106C-222	ENST00000615597	USP42	Q9H9J4	1324 aa	Known RBP	10.03	□□□□□ -0.8
TMEM106C-222	ENST00000615597	RFC4	P35249	363 aa		10.02	□□□□□ -0.81
TMEM106C-222	ENST00000615597	TEF	Q10587	303 aa		10.02	□□□□□ -0.81
TMEM106C-222	ENST00000615597	CNGB1	Q14028	1251 aa	Predicted RBP	10.02	□□□□□ -0.81
TMEM106C-222	ENST00000615597	CCDC87	Q9NVE4	849 aa		10.02	□□□□□ -0.81
TMEM106C-222	ENST00000615597	HEG1	Q9ULI3	1381 aa		10.01	□□□□□ -0.81
TMEM106C-222	ENST00000615597	MMP10	P09238	476 aa		10.01	□□□□□ -0.81
TMEM106C-222	ENST00000615597	TGFB2	P61812	414 aa		10.01	□□□□□ -0.81
TMEM106C-222	ENST00000615597	ARHGAP27	Q6ZUM4	889 aa		10.01	□□□□□ -0.81
TMEM106C-222	ENST00000615597	ZNF496	Q96IT1	587 aa	Predicted RBP	10.01	□□□□□ -0.81
TMEM106C-222	ENST00000615597	PNN	Q9H307	717 aa	Known RBP	10.01	□□□□□ -0.81
TMEM106C-222	ENST00000615597	PDE4DIP	Q5VU43	2346 aa		10.01	□□□□□ -0.81
TMEM106C-222	ENST00000615597	C10orf71	Q711Q0	1435 aa		10	□□□□□ -0.81
TMEM106C-222	ENST00000615597	STARD3NL	O95772	234 aa		10	□□□□□ -0.81
TMEM106C-222	ENST00000615597	TM4SF1	P30408	202 aa		10	□□□□□ -0.81
TMEM106C-222	ENST00000615597	EIF5	P55010	431 aa	Known RBP	10	□□□□□ -0.81
TMEM106C-222	ENST00000615597	DDX10	Q13206	875 aa	Known RBP	10	□□□□□ -0.81
TMEM106C-222	ENST00000615597	TTC5	Q8N0Z6	440 aa		10	□□□□□ -0.81

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