RNA–Protein interactions for RNA: ENST00000613405.4

TRAK1-210, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2 BASIC

Gene TRAK1, Length 4,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-210ENST00000613405 PTPRCP08575 1304 aa15.55■□□□□ 0.08
TRAK1-210ENST00000613405 PIP4K2AP48426 406 aaPredicted RBP15.55■□□□□ 0.08
TRAK1-210ENST00000613405 ANO10Q9NW15 660 aa15.55■□□□□ 0.08
TRAK1-210ENST00000613405 RAB11FIP3O75154 756 aa15.54■□□□□ 0.08
TRAK1-210ENST00000613405 MTMR7Q9Y216 660 aa15.54■□□□□ 0.08
TRAK1-210ENST00000613405 STX6O43752 255 aa15.54■□□□□ 0.08
TRAK1-210ENST00000613405 TTC22Q5TAA0 569 aa15.54■□□□□ 0.08
TRAK1-210ENST00000613405 LARP1Q6PKG0 1096 aaKnown RBP15.54■□□□□ 0.08
TRAK1-210ENST00000613405 CCDC102AQ96A19 550 aa15.54■□□□□ 0.08
TRAK1-210ENST00000613405 URI1O94763 535 aaPredicted RBP15.54■□□□□ 0.08
TRAK1-210ENST00000613405 NOLC1Q14978 699 aaKnown RBP eCLIP15.54■□□□□ 0.08
TRAK1-210ENST00000613405 BOLA2Q9H3K6 86 aa15.54■□□□□ 0.08
TRAK1-210ENST00000613405 DBF4Q9UBU7 674 aaPredicted RBP15.54■□□□□ 0.08
TRAK1-210ENST00000613405 ZNHIT6Q9NWK9 470 aaKnown RBP15.53■□□□□ 0.08
TRAK1-210ENST00000613405 TEX14Q8IWB6 1497 aa15.53■□□□□ 0.08
TRAK1-210ENST00000613405 DNMT1P26358 1616 aaKnown RBP15.53■□□□□ 0.08
TRAK1-210ENST00000613405 ANXA1P04083 346 aa15.53■□□□□ 0.08
TRAK1-210ENST00000613405 PRIM1P49642 420 aaKnown RBP15.53■□□□□ 0.08
TRAK1-210ENST00000613405 TMX3Q96JJ7 454 aa15.53■□□□□ 0.08
TRAK1-210ENST00000613405 C8orf58Q8NAV2 365 aa15.53■□□□□ 0.08
TRAK1-210ENST00000613405 MAGEC2Q9UBF1 373 aaPredicted RBP15.53■□□□□ 0.08
TRAK1-210ENST00000613405 UBE2HP62256 183 aa15.53■□□□□ 0.08
TRAK1-210ENST00000613405 RAB3GAP1Q15042 981 aa15.53■□□□□ 0.08
TRAK1-210ENST00000613405 TRERF1Q96PN7 1200 aa15.53■□□□□ 0.08
TRAK1-210ENST00000613405 TFIP11Q9UBB9 837 aaKnown RBP15.53■□□□□ 0.08
TRAK1-210ENST00000613405 CALCOCO1Q9P1Z2 691 aa15.52■□□□□ 0.08
TRAK1-210ENST00000613405 SMC5Q8IY18 1101 aa15.52■□□□□ 0.08
TRAK1-210ENST00000613405 MEIS3Q99687 375 aa15.52■□□□□ 0.08
TRAK1-210ENST00000613405 ARHGAP45Q92619 1136 aa15.52■□□□□ 0.07
TRAK1-210ENST00000613405 DDX19AQ9NUU7 478 aaKnown RBP15.52■□□□□ 0.07
TRAK1-210ENST00000613405 TNRQ92752 1358 aa15.52■□□□□ 0.07
TRAK1-210ENST00000613405 ZNF165P49910 485 aa15.52■□□□□ 0.07
TRAK1-210ENST00000613405 MEX3CQ5U5Q3 659 aaKnown RBP15.52■□□□□ 0.07
TRAK1-210ENST00000613405 TSHZ3Q63HK5 1081 aa15.52■□□□□ 0.07
TRAK1-210ENST00000613405 MPHOSPH8Q99549 860 aa15.52■□□□□ 0.07
TRAK1-210ENST00000613405 PI4KAP2A4QPH2 592 aa15.51■□□□□ 0.07
TRAK1-210ENST00000613405 GIMAP6Q6P9H5 292 aa15.51■□□□□ 0.07
TRAK1-210ENST00000613405 PI4KAP1Q8N8J0 262 aa15.51■□□□□ 0.07
TRAK1-210ENST00000613405 MYD88Q99836 296 aa15.51■□□□□ 0.07
TRAK1-210ENST00000613405 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.51■□□□□ 0.078e-7■■■■■ 31.6
TRAK1-210ENST00000613405 CCDC8Q9H0W5 538 aaPredicted RBP15.51■□□□□ 0.07
TRAK1-210ENST00000613405 UHRF1BP1Q6BDS2 1440 aa15.51■□□□□ 0.07
TRAK1-210ENST00000613405 EIF4G3O43432 1585 aaKnown RBP15.51■□□□□ 0.07
TRAK1-210ENST00000613405 KIAA0754O94854 1291 aa15.51■□□□□ 0.07
TRAK1-210ENST00000613405 TXLNAP40222 546 aa15.51■□□□□ 0.07
TRAK1-210ENST00000613405 TRIM22Q8IYM9 498 aa15.51■□□□□ 0.07
TRAK1-210ENST00000613405 PUS7Q96PZ0 661 aaKnown RBP15.51■□□□□ 0.07
TRAK1-210ENST00000613405 PIK3C2GO75747 1445 aa15.51■□□□□ 0.07
TRAK1-210ENST00000613405 POLR3GO15318 223 aaPredicted RBP15.51■□□□□ 0.07
TRAK1-210ENST00000613405 ARHGAP29Q52LW3 1261 aa15.5■□□□□ 0.07
TRAK1-210ENST00000613405 NEMFO60524 1076 aa15.5■□□□□ 0.07
TRAK1-210ENST00000613405 PHACTR3Q96KR7 559 aa15.5■□□□□ 0.07
TRAK1-210ENST00000613405 KIF21AQ7Z4S6 1674 aa15.5■□□□□ 0.07
TRAK1-210ENST00000613405 ABCC10Q5T3U5 1492 aa15.5■□□□□ 0.07
TRAK1-210ENST00000613405 SDSP20132 328 aa15.5■□□□□ 0.07
TRAK1-210ENST00000613405 HS1BP3Q53T59 392 aa15.5■□□□□ 0.07
TRAK1-210ENST00000613405 TSPYL6Q8N831 410 aa15.5■□□□□ 0.07
TRAK1-210ENST00000613405 CCDC191Q8NCU4 936 aa15.5■□□□□ 0.07
TRAK1-210ENST00000613405 TRIM34Q9BYJ4 488 aa15.5■□□□□ 0.07
TRAK1-210ENST00000613405 TTC12Q9H892 705 aaPredicted RBP15.5■□□□□ 0.07
TRAK1-210ENST00000613405 NUTM2BA6NNL0 878 aaPredicted RBP15.5■□□□□ 0.07
TRAK1-210ENST00000613405 NUTM2EB1AL46 878 aaPredicted RBP15.5■□□□□ 0.07
TRAK1-210ENST00000613405 NUTM2AQ8IVF1 878 aaPredicted RBP15.5■□□□□ 0.07
TRAK1-210ENST00000613405 ZSCAN12O43309 604 aa15.49■□□□□ 0.07
TRAK1-210ENST00000613405 GJB2P29033 226 aa15.49■□□□□ 0.07
TRAK1-210ENST00000613405 EPS15P42566 896 aa15.49■□□□□ 0.07
TRAK1-210ENST00000613405 EIF4A2Q14240 407 aaKnown RBP15.49■□□□□ 0.07
TRAK1-210ENST00000613405 UHRF1BP1LA0JNW5 1464 aa15.49■□□□□ 0.07
TRAK1-210ENST00000613405 ADGRL2O95490 1459 aa15.49■□□□□ 0.07
TRAK1-210ENST00000613405 COL17A1Q9UMD9 1497 aaPredicted RBP15.49■□□□□ 0.07
TRAK1-210ENST00000613405 FAM193AP78312 1265 aa15.49■□□□□ 0.07
TRAK1-210ENST00000613405 MAGI3Q5TCQ9 1506 aa15.49■□□□□ 0.07
TRAK1-210ENST00000613405 RNF123Q5XPI4 1314 aa15.49■□□□□ 0.07
TRAK1-210ENST00000613405 NCKAP5LQ9HCH0 1330 aa15.49■□□□□ 0.07
TRAK1-210ENST00000613405 PPIP5K1Q6PFW1 1433 aa15.48■□□□□ 0.07
TRAK1-210ENST00000613405 PPP1R42Q7Z4L9 355 aa15.48■□□□□ 0.07
TRAK1-210ENST00000613405 DEF6Q9H4E7 631 aa15.48■□□□□ 0.07
TRAK1-210ENST00000613405 EPB41L2O43491 1005 aaKnown RBP15.48■□□□□ 0.07
TRAK1-210ENST00000613405 CTAGE5O15320 804 aa15.48■□□□□ 0.07
TRAK1-210ENST00000613405 GTF2F1P35269 517 aaKnown RBP eCLIP15.48■□□□□ 0.07
TRAK1-210ENST00000613405 A0A1W2PP64 1363 aa15.48■□□□□ 0.07
TRAK1-210ENST00000613405 KRT24Q2M2I5 525 aa15.47■□□□□ 0.07
TRAK1-210ENST00000613405 KRT28Q7Z3Y7 464 aa15.47■□□□□ 0.07
TRAK1-210ENST00000613405 CTNNA3Q9UI47 895 aa15.47■□□□□ 0.07
TRAK1-210ENST00000613405 CCDC181Q5TID7 509 aa15.47■□□□□ 0.07
TRAK1-210ENST00000613405 VAMP4O75379 141 aa15.47■□□□□ 0.07
TRAK1-210ENST00000613405 IDH1O75874 414 aaKnown RBP15.47■□□□□ 0.07
TRAK1-210ENST00000613405 CDKL5O76039 1030 aa15.47■□□□□ 0.07
TRAK1-210ENST00000613405 RIMS2Q9UQ26 1411 aa15.47■□□□□ 0.07
TRAK1-210ENST00000613405 USP48Q86UV5 1035 aa15.46■□□□□ 0.07
TRAK1-210ENST00000613405 MRPL50Q8N5N7 158 aaKnown RBP15.46■□□□□ 0.07
TRAK1-210ENST00000613405 HYPKQ9NX55 129 aa15.46■□□□□ 0.07
TRAK1-210ENST00000613405 A0A087WZG4 1122 aa15.46■□□□□ 0.07
TRAK1-210ENST00000613405 GUCY1B3Q02153 619 aa15.46■□□□□ 0.07
TRAK1-210ENST00000613405 PAXBP1Q9Y5B6 917 aa15.46■□□□□ 0.07
TRAK1-210ENST00000613405 ABCA5Q8WWZ7 1642 aa15.46■□□□□ 0.07
TRAK1-210ENST00000613405 ZSCAN22P10073 491 aaPredicted RBP15.46■□□□□ 0.07
TRAK1-210ENST00000613405 TOP1P11387 765 aaKnown RBP15.46■□□□□ 0.07
TRAK1-210ENST00000613405 GSDMDP57764 484 aa15.46■□□□□ 0.07
TRAK1-210ENST00000613405 CEP135Q66GS9 1140 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms