RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 BABAM1Q9NWV8 329 aa11.43□□□□□ -0.58
CCDC47-207ENST00000612558 AHDC1Q5TGY3 1603 aaPredicted RBP11.43□□□□□ -0.58
CCDC47-207ENST00000612558 FAM208AQ9UK61 1670 aaKnown RBP11.42□□□□□ -0.58
CCDC47-207ENST00000612558 ECM2O94769 699 aaPredicted RBP11.42□□□□□ -0.58
CCDC47-207ENST00000612558 PBX2P40425 430 aa11.42□□□□□ -0.58
CCDC47-207ENST00000612558 ZNF530Q6P9A1 599 aaPredicted RBP11.42□□□□□ -0.58
CCDC47-207ENST00000612558 TSPYL6Q8N831 410 aa11.42□□□□□ -0.58
CCDC47-207ENST00000612558 C8orf58Q8NAV2 365 aa11.42□□□□□ -0.58
CCDC47-207ENST00000612558 MFRPQ9BY79 579 aa11.42□□□□□ -0.58
CCDC47-207ENST00000612558 TSPYL4Q9UJ04 414 aa11.42□□□□□ -0.58
CCDC47-207ENST00000612558 PLEKHG2Q9H7P9 1386 aa11.42□□□□□ -0.58
CCDC47-207ENST00000612558 IPO8O15397 1037 aaKnown RBP11.41□□□□□ -0.58
CCDC47-207ENST00000612558 TATP17735 454 aaPredicted RBP11.41□□□□□ -0.58
CCDC47-207ENST00000612558 TAF7Q15545 349 aaPredicted RBP11.41□□□□□ -0.58
CCDC47-207ENST00000612558 C1orf141Q5JVX7 400 aa11.41□□□□□ -0.58
CCDC47-207ENST00000612558 TMC2Q8TDI7 906 aa11.41□□□□□ -0.58
CCDC47-207ENST00000612558 KIF16BQ96L93 1317 aa11.41□□□□□ -0.58
CCDC47-207ENST00000612558 ABCA3Q99758 1704 aa11.41□□□□□ -0.58
CCDC47-207ENST00000612558 CEMIPQ8WUJ3 1361 aa11.41□□□□□ -0.58
CCDC47-207ENST00000612558 C2orf72A6NCS6 295 aa11.41□□□□□ -0.58
CCDC47-207ENST00000612558 ELL2O00472 640 aaPredicted RBP11.41□□□□□ -0.58
CCDC47-207ENST00000612558 LSM11P83369 360 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCDC47-207ENST00000612558 KHSRPQ92945 711 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCDC47-207ENST00000612558 NOB1Q9ULX3 412 aaKnown RBP11.41□□□□□ -0.58
CCDC47-207ENST00000612558 WDR17Q8IZU2 1322 aa11.4□□□□□ -0.58
CCDC47-207ENST00000612558 LRRC37A3O60309 1634 aa11.4□□□□□ -0.58
CCDC47-207ENST00000612558 AAMPQ13685 434 aa11.4□□□□□ -0.58
CCDC47-207ENST00000612558 PANK1Q8TE04 598 aa11.4□□□□□ -0.58
CCDC47-207ENST00000612558 MIS18AQ9NYP9 233 aa11.4□□□□□ -0.58
CCDC47-207ENST00000612558 SPG7Q9UQ90 795 aa11.4□□□□□ -0.58
CCDC47-207ENST00000612558 KIF3CO14782 793 aa11.39□□□□□ -0.59
CCDC47-207ENST00000612558 ATF7IPQ6VMQ6 1270 aa11.39□□□□□ -0.59
CCDC47-207ENST00000612558 FTSJ3Q8IY81 847 aaKnown RBP11.39□□□□□ -0.59
CCDC47-207ENST00000612558 DZIP1LQ8IYY4 767 aaKnown RBP11.39□□□□□ -0.59
CCDC47-207ENST00000612558 MRPL50Q8N5N7 158 aaKnown RBP11.39□□□□□ -0.59
CCDC47-207ENST00000612558 COG6Q9Y2V7 657 aa11.39□□□□□ -0.59
CCDC47-207ENST00000612558 COL5A2P05997 1499 aaPredicted RBP11.39□□□□□ -0.59
CCDC47-207ENST00000612558 EVA1CP58658 441 aa11.38□□□□□ -0.59
CCDC47-207ENST00000612558 TOM1L2Q6ZVM7 507 aa11.38□□□□□ -0.59
CCDC47-207ENST00000612558 ARHGAP45Q92619 1136 aa11.38□□□□□ -0.59
CCDC47-207ENST00000612558 LGR6Q9HBX8 967 aa11.38□□□□□ -0.59
CCDC47-207ENST00000612558 OVOS2A0A0G2JMS6 1433 aa11.38□□□□□ -0.59
CCDC47-207ENST00000612558 RNMTO43148 476 aaKnown RBP11.37□□□□□ -0.59
CCDC47-207ENST00000612558 SLC34A2O95436 690 aa11.37□□□□□ -0.59
CCDC47-207ENST00000612558 RLBP1P12271 317 aa11.37□□□□□ -0.59
CCDC47-207ENST00000612558 TRIM27P14373 513 aa11.37□□□□□ -0.59
CCDC47-207ENST00000612558 TEFQ10587 303 aa11.37□□□□□ -0.59
CCDC47-207ENST00000612558 KRT24Q2M2I5 525 aa11.37□□□□□ -0.59
CCDC47-207ENST00000612558 MPRIPQ6WCQ1 1025 aa11.37□□□□□ -0.59
CCDC47-207ENST00000612558 CLUAP1Q96AJ1 413 aa11.37□□□□□ -0.59
CCDC47-207ENST00000612558 CARD10Q9BWT7 1032 aa11.37□□□□□ -0.59
CCDC47-207ENST00000612558 SOS1Q07889 1333 aaPredicted RBP11.37□□□□□ -0.59
CCDC47-207ENST00000612558 COL22A1Q8NFW1 1626 aaPredicted RBP11.37□□□□□ -0.59
CCDC47-207ENST00000612558 NUDT7P0C024 238 aa11.37□□□□□ -0.59
CCDC47-207ENST00000612558 PIP4K2BP78356 416 aa11.37□□□□□ -0.59
CCDC47-207ENST00000612558 MVPQ14764 893 aaKnown RBP11.37□□□□□ -0.59
CCDC47-207ENST00000612558 TNNQ9UQP3 1299 aa11.37□□□□□ -0.59
CCDC47-207ENST00000612558 MEGF6O75095 1541 aa11.36□□□□□ -0.59
CCDC47-207ENST00000612558 PHLPP1O60346 1717 aa11.36□□□□□ -0.59
CCDC47-207ENST00000612558 IFNL2Q8IZJ0 200 aa11.36□□□□□ -0.59
CCDC47-207ENST00000612558 STRN4Q9NRL3 753 aa11.36□□□□□ -0.59
CCDC47-207ENST00000612558 UBAP1LF5GYI3 381 aa11.35□□□□□ -0.59
CCDC47-207ENST00000612558 PHKG2P15735 406 aa11.35□□□□□ -0.59
CCDC47-207ENST00000612558 PCDHGA4Q9Y5G9 962 aa11.35□□□□□ -0.59
CCDC47-207ENST00000612558 COL16A1Q07092 1604 aaPredicted RBP11.34□□□□□ -0.59
CCDC47-207ENST00000612558 BTBD11A6QL63 1104 aa11.34□□□□□ -0.59
CCDC47-207ENST00000612558 TCERG1O14776 1098 aaKnown RBP11.34□□□□□ -0.59
CCDC47-207ENST00000612558 HSP90AB1P08238 724 aaKnown RBP11.34□□□□□ -0.59
CCDC47-207ENST00000612558 LARP1Q6PKG0 1096 aaKnown RBP11.34□□□□□ -0.59
CCDC47-207ENST00000612558 API5Q9BZZ5 524 aaKnown RBP11.34□□□□□ -0.59
CCDC47-207ENST00000612558 BTG4Q9NY30 223 aa11.34□□□□□ -0.59
CCDC47-207ENST00000612558 DDX19BQ9UMR2 479 aa11.34□□□□□ -0.59
CCDC47-207ENST00000612558 VIRMAQ69YN4 1812 aaKnown RBP11.34□□□□□ -0.59
CCDC47-207ENST00000612558 PSDA5PKW4 1024 aaPredicted RBP11.33□□□□□ -0.6
CCDC47-207ENST00000612558 IL2RBP14784 551 aa11.33□□□□□ -0.6
CCDC47-207ENST00000612558 DCAF5Q96JK2 942 aa11.33□□□□□ -0.6
CCDC47-207ENST00000612558 CHMP4AQ9BY43 222 aa11.33□□□□□ -0.6
CCDC47-207ENST00000612558 COL14A1Q05707 1796 aaKnown RBP11.33□□□□□ -0.6
CCDC47-207ENST00000612558 ADAMTS7Q9UKP4 1686 aa11.33□□□□□ -0.6
CCDC47-207ENST00000612558 PKD1L3Q7Z443 1732 aa11.33□□□□□ -0.6
CCDC47-207ENST00000612558 CYP27B1O15528 508 aa11.33□□□□□ -0.6
CCDC47-207ENST00000612558 EIF4A1P60842 406 aaKnown RBP11.33□□□□□ -0.6
CCDC47-207ENST00000612558 CCDC30Q5VVM6 783 aa11.33□□□□□ -0.6
CCDC47-207ENST00000612558 CENPQQ7L2Z9 268 aaPredicted RBP11.33□□□□□ -0.6
CCDC47-207ENST00000612558 ITPRIPQ8IWB1 547 aa11.33□□□□□ -0.6
CCDC47-207ENST00000612558 TMEM57Q8N5G2 664 aa11.33□□□□□ -0.6
CCDC47-207ENST00000612558 ZCRB1Q8TBF4 217 aaKnown RBP11.33□□□□□ -0.6
CCDC47-207ENST00000612558 LHX6Q9UPM6 363 aa11.33□□□□□ -0.6
CCDC47-207ENST00000612558 PTPRCP08575 1304 aa11.32□□□□□ -0.6
CCDC47-207ENST00000612558 HOXB7P09629 217 aa11.32□□□□□ -0.6
CCDC47-207ENST00000612558 STK31Q9BXU1 1019 aa11.32□□□□□ -0.6
CCDC47-207ENST00000612558 CHMP4BQ9H444 224 aaKnown RBP11.32□□□□□ -0.6
CCDC47-207ENST00000612558 PARP4Q9UKK3 1724 aaKnown RBP11.31□□□□□ -0.6
CCDC47-207ENST00000612558 CACNA1FO60840 1977 aa11.31□□□□□ -0.6
CCDC47-207ENST00000612558 ABCC4O15439 1325 aa11.31□□□□□ -0.6
CCDC47-207ENST00000612558 KDM2BQ8NHM5 1336 aa11.31□□□□□ -0.6
CCDC47-207ENST00000612558 PCDH11XQ9BZA7 1347 aa11.31□□□□□ -0.6
CCDC47-207ENST00000612558 PCDH11YQ9BZA8 1340 aa11.31□□□□□ -0.6
CCDC47-207ENST00000612558 KDM3BQ7LBC6 1761 aa11.31□□□□□ -0.6
CCDC47-207ENST00000612558 SCN11AQ9UI33 1791 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms