RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, humanhuman

Gene CCND3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-222ENST00000612455 PNISRQ8TF01 805 aaKnown RBP22.05■■□□□ 1.12
CCND3-222ENST00000612455 CCDC146Q8IYE0 955 aa22.04■■□□□ 1.12
CCND3-222ENST00000612455 USP42Q9H9J4 1324 aaKnown RBP22.04■■□□□ 1.12
CCND3-222ENST00000612455 EIF5P55010 431 aaKnown RBP22.03■■□□□ 1.12
CCND3-222ENST00000612455 CCDC184Q52MB2 194 aa22.03■■□□□ 1.12
CCND3-222ENST00000612455 THUMPD2Q9BTF0 503 aaKnown RBP22.03■■□□□ 1.12
CCND3-222ENST00000612455 MIS18AQ9NYP9 233 aa22.03■■□□□ 1.12
CCND3-222ENST00000612455 CD2APQ9Y5K6 639 aa22.03■■□□□ 1.12
CCND3-222ENST00000612455 USP16Q9Y5T5 823 aa22.03■■□□□ 1.12
CCND3-222ENST00000612455 SNRPA1P09661 255 aaKnown RBP22.02■■□□□ 1.12
CCND3-222ENST00000612455 LMOD3Q0VAK6 560 aa22.01■■□□□ 1.11
CCND3-222ENST00000612455 SRP68Q9UHB9 627 aaKnown RBP22.01■■□□□ 1.11
CCND3-222ENST00000612455 NARFQ9UHQ1 456 aa22.01■■□□□ 1.11
CCND3-222ENST00000612455 KDM3BQ7LBC6 1761 aa22.01■■□□□ 1.11
CCND3-222ENST00000612455 ANP32CO43423 234 aa22■■□□□ 1.11
CCND3-222ENST00000612455 MMP10P09238 476 aa22■■□□□ 1.11
CCND3-222ENST00000612455 CANXP27824 592 aaKnown RBP22■■□□□ 1.11
CCND3-222ENST00000612455 COL15A1P39059 1388 aa21.99■■□□□ 1.11
CCND3-222ENST00000612455 PRAMEF22A3QJZ6 481 aa21.99■■□□□ 1.11
CCND3-222ENST00000612455 A1BGP04217 495 aa21.99■■□□□ 1.11
CCND3-222ENST00000612455 IL6STP40189 918 aaPredicted RBP21.99■■□□□ 1.11
CCND3-222ENST00000612455 NLGN2Q8NFZ4 835 aa21.99■■□□□ 1.11
CCND3-222ENST00000612455 BABAM1Q9NWV8 329 aa21.99■■□□□ 1.11
CCND3-222ENST00000612455 TRIM35Q9UPQ4 493 aa21.99■■□□□ 1.11
CCND3-222ENST00000612455 RRP7AQ9Y3A4 280 aaKnown RBP21.99■■□□□ 1.11
CCND3-222ENST00000612455 DCAF8L1A6NGE4 600 aa21.98■■□□□ 1.11
CCND3-222ENST00000612455 TM4SF1P30408 202 aa21.98■■□□□ 1.11
CCND3-222ENST00000612455 EIF4A1P60842 406 aaKnown RBP21.98■■□□□ 1.11
CCND3-222ENST00000612455 FKBP8Q14318 412 aa21.98■■□□□ 1.11
CCND3-222ENST00000612455 ZPR1O75312 459 aa21.97■■□□□ 1.11
CCND3-222ENST00000612455 USPL1Q5W0Q7 1092 aa21.97■■□□□ 1.11
CCND3-222ENST00000612455 KLHL34Q8N239 644 aa21.97■■□□□ 1.11
CCND3-222ENST00000612455 BCL2L12Q9HB09 334 aa21.97■■□□□ 1.11
CCND3-222ENST00000612455 A0A087WZG4 1122 aa21.96■■□□□ 1.11
CCND3-222ENST00000612455 GIGYF1O75420 1035 aaPredicted RBP21.96■■□□□ 1.11
CCND3-222ENST00000612455 NEUROD2Q15784 382 aa21.96■■□□□ 1.11
CCND3-222ENST00000612455 KIF13BQ9NQT8 1826 aa21.94■■□□□ 1.1
CCND3-222ENST00000612455 CHL1O00533 1208 aa21.93■■□□□ 1.1
CCND3-222ENST00000612455 APAF1O14727 1248 aa21.93■■□□□ 1.1
CCND3-222ENST00000612455 PARP3Q9Y6F1 533 aa21.93■■□□□ 1.1
CCND3-222ENST00000612455 NBPF26B4DH59 902 aa21.92■■□□□ 1.1
CCND3-222ENST00000612455 DDR1Q08345 913 aa21.92■■□□□ 1.1
CCND3-222ENST00000612455 NBPF10Q6P3W6 841 aaKnown RBP21.92■■□□□ 1.1
CCND3-222ENST00000612455 NBPF15Q8N660 670 aa21.92■■□□□ 1.1
CCND3-222ENST00000612455 TSPYL4Q9UJ04 414 aa21.92■■□□□ 1.1
CCND3-222ENST00000612455 POLRMTO00411 1230 aaKnown RBP21.91■■□□□ 1.1
CCND3-222ENST00000612455 NFIXQ14938 502 aa21.9■■□□□ 1.1
CCND3-222ENST00000612455 MRS2Q9HD23 443 aa21.9■■□□□ 1.1
CCND3-222ENST00000612455 TBC1D2BQ9UPU7 963 aa21.9■■□□□ 1.1
CCND3-222ENST00000612455 LAMB4A4D0S4 1761 aa21.89■■□□□ 1.1
CCND3-222ENST00000612455 TGFB2P61812 414 aa21.89■■□□□ 1.09
CCND3-222ENST00000612455 C10orf71Q711Q0 1435 aa21.89■■□□□ 1.09
CCND3-222ENST00000612455 CAMTA2O94983 1202 aa21.88■■□□□ 1.09
CCND3-222ENST00000612455 PIP4K2AP48426 406 aaPredicted RBP21.88■■□□□ 1.09
CCND3-222ENST00000612455 GPR162Q16538 588 aa21.88■■□□□ 1.09
CCND3-222ENST00000612455 DZIP3Q86Y13 1208 aaKnown RBP21.87■■□□□ 1.09
CCND3-222ENST00000612455 KIAA1551Q9HCM1 1747 aa21.86■■□□□ 1.09
CCND3-222ENST00000612455 NRXN2Q9P2S2 1712 aa21.86■■□□□ 1.09
CCND3-222ENST00000612455 AFDNP55196 1824 aaKnown RBP21.86■■□□□ 1.09
CCND3-222ENST00000612455 ZNF853P0CG23 659 aa21.86■■□□□ 1.09
CCND3-222ENST00000612455 NPM2Q86SE8 214 aaKnown RBP21.86■■□□□ 1.09
CCND3-222ENST00000612455 CFAP44Q96MT7 982 aa21.86■■□□□ 1.09
CCND3-222ENST00000612455 ZNF330Q9Y3S2 320 aaPredicted RBP21.86■■□□□ 1.09
CCND3-222ENST00000612455 SCN7AQ01118 1682 aa21.85■■□□□ 1.09
CCND3-222ENST00000612455 RGL2O15211 777 aa21.85■■□□□ 1.09
CCND3-222ENST00000612455 YBX3P16989 372 aaKnown RBP eCLIP21.85■■□□□ 1.09
CCND3-222ENST00000612455 NCBP3Q53F19 620 aaKnown RBP21.85■■□□□ 1.09
CCND3-222ENST00000612455 UTRNP46939 3433 aa21.84■■□□□ 1.09
CCND3-222ENST00000612455 SERPINB2P05120 415 aa21.84■■□□□ 1.09
CCND3-222ENST00000612455 TBC1D9BQ66K14 1250 aa21.84■■□□□ 1.09
CCND3-222ENST00000612455 CLEC4GQ6UXB4 293 aa21.84■■□□□ 1.09
CCND3-222ENST00000612455 PXDNLA1KZ92 1463 aa21.83■■□□□ 1.09
CCND3-222ENST00000612455 ERBB4Q15303 1308 aa21.83■■□□□ 1.09
CCND3-222ENST00000612455 CHD4Q14839 1912 aa21.83■■□□□ 1.09
CCND3-222ENST00000612455 BCORQ6W2J9 1755 aa21.83■■□□□ 1.09
CCND3-222ENST00000612455 GOLGB1Q14789 3259 aaKnown RBP21.83■■□□□ 1.08
CCND3-222ENST00000612455 GRIN3BO60391 1043 aa21.82■■□□□ 1.08
CCND3-222ENST00000612455 KCNA3P22001 575 aa21.82■■□□□ 1.08
CCND3-222ENST00000612455 CCDC27Q2M243 656 aa21.82■■□□□ 1.08
CCND3-222ENST00000612455 LAS1LQ9Y4W2 734 aaKnown RBP21.82■■□□□ 1.08
CCND3-222ENST00000612455 N4BP2Q86UW6 1770 aaPredicted RBP21.82■■□□□ 1.08
CCND3-222ENST00000612455 A0A0G2JLW4 131 aa21.81■■□□□ 1.08
CCND3-222ENST00000612455 PDIA6Q15084 440 aa21.81■■□□□ 1.08
CCND3-222ENST00000612455 PELP1Q8IZL8 1130 aaKnown RBP21.81■■□□□ 1.08
CCND3-222ENST00000612455 DPEP1P16444 411 aa21.8■■□□□ 1.08
CCND3-222ENST00000612455 CALD1Q05682 793 aaKnown RBP21.8■■□□□ 1.08
CCND3-222ENST00000612455 LRP10Q7Z4F1 713 aa21.8■■□□□ 1.08
CCND3-222ENST00000612455 IFT57Q9NWB7 429 aa21.8■■□□□ 1.08
CCND3-222ENST00000612455 GNAI1P63096 354 aa21.79■■□□□ 1.08
CCND3-222ENST00000612455 KRT24Q2M2I5 525 aa21.79■■□□□ 1.08
CCND3-222ENST00000612455 BICDL1Q6ZP65 573 aa21.79■■□□□ 1.08
CCND3-222ENST00000612455 MBIPQ9NS73 344 aa21.79■■□□□ 1.08
CCND3-222ENST00000612455 BRCA1P38398 1863 aaKnown RBP21.78■■□□□ 1.08
CCND3-222ENST00000612455 ERVV-1B6SEH8 477 aa21.78■■□□□ 1.08
CCND3-222ENST00000612455 HOXB7P09629 217 aa21.78■■□□□ 1.08
CCND3-222ENST00000612455 YY1P25490 414 aa21.78■■□□□ 1.08
CCND3-222ENST00000612455 SETDB2Q96T68 719 aa21.78■■□□□ 1.08
CCND3-222ENST00000612455 EIF2S2P20042 333 aaKnown RBP21.77■■□□□ 1.08
CCND3-222ENST00000612455 HLFQ16534 295 aa21.77■■□□□ 1.08
CCND3-222ENST00000612455 ZNF652Q9Y2D9 606 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms