RNA–Protein interactions for RNA: ENST00000612229.4

PTPRT-209, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5 BASIC

Gene PTPRT, Length 11,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-209ENST00000612229 ANKRD50Q9ULJ7 1429 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 TTC21AQ8NDW8 1320 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 ERBINQ96RT1 1412 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 MAPK8IP2Q13387 824 aaPredicted RBP8.04□□□□□ -1.12
PTPRT-209ENST00000612229 MAP7Q14244 749 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 MSL1Q68DK7 614 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 PTPN23Q9H3S7 1636 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 GTF2F1P35269 517 aaKnown RBP eCLIP8.04□□□□□ -1.12
PTPRT-209ENST00000612229 SNW1Q13573 536 aaKnown RBP8.04□□□□□ -1.12
PTPRT-209ENST00000612229 KIF4BQ2VIQ3 1234 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 VCX3BQ9H321 246 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 EHMT1Q9H9B1 1298 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 COMMD10Q9Y6G5 202 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 ATP2A1O14983 1001 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 TWISTNBQ3B726 338 aaPredicted RBP8.04□□□□□ -1.12
PTPRT-209ENST00000612229 MPHOSPH6Q99547 160 aaKnown RBP8.04□□□□□ -1.12
PTPRT-209ENST00000612229 RBM28Q9NW13 759 aaKnown RBP8.04□□□□□ -1.12
PTPRT-209ENST00000612229 STIM2Q9P246 746 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 TUBBP07437 444 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 STXBP4Q6ZWJ1 553 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 C16orf45Q96MC5 204 aaPredicted RBP8.04□□□□□ -1.12
PTPRT-209ENST00000612229 HMOX1P09601 288 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 CLCN1P35523 988 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 XPCQ01831 940 aaPredicted RBP8.04□□□□□ -1.12
PTPRT-209ENST00000612229 SEPT14Q6ZU15 432 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 CTNNA2P26232 953 aa8.03□□□□□ -1.12
PTPRT-209ENST00000612229 RAB3IPQ96QF0 476 aaPredicted RBP8.03□□□□□ -1.12
PTPRT-209ENST00000612229 DDX19AQ9NUU7 478 aaKnown RBP8.03□□□□□ -1.12
PTPRT-209ENST00000612229 ATP2B1P20020 1258 aa8.03□□□□□ -1.12
PTPRT-209ENST00000612229 ZHX1Q9UKY1 873 aaPredicted RBP8.03□□□□□ -1.12
PTPRT-209ENST00000612229 NUTM2DQ5VT03 806 aaPredicted RBP8.03□□□□□ -1.12
PTPRT-209ENST00000612229 CCDC50Q8IVM0 306 aa8.03□□□□□ -1.12
PTPRT-209ENST00000612229 PHF23Q9BUL5 403 aaPredicted RBP8.03□□□□□ -1.12
PTPRT-209ENST00000612229 ARFGAP3Q9NP61 516 aa8.03□□□□□ -1.12
PTPRT-209ENST00000612229 U3KPZ7 1027 aaPredicted RBP8.03□□□□□ -1.12
PTPRT-209ENST00000612229 URI1O94763 535 aaPredicted RBP8.03□□□□□ -1.12
PTPRT-209ENST00000612229 LARP1Q6PKG0 1096 aaKnown RBP8.03□□□□□ -1.12
PTPRT-209ENST00000612229 PNISRQ8TF01 805 aaKnown RBP8.03□□□□□ -1.12
PTPRT-209ENST00000612229 SRRTQ9BXP5 876 aaKnown RBP8.03□□□□□ -1.12
PTPRT-209ENST00000612229 RAB11FIP3O75154 756 aa8.03□□□□□ -1.12
PTPRT-209ENST00000612229 LIG1P18858 919 aa8.03□□□□□ -1.12
PTPRT-209ENST00000612229 LMAN1P49257 510 aa8.03□□□□□ -1.12
PTPRT-209ENST00000612229 ERCC6LQ2NKX8 1250 aa8.03□□□□□ -1.12
PTPRT-209ENST00000612229 JAKMIP1Q96N16 626 aaKnown RBP8.03□□□□□ -1.12
PTPRT-209ENST00000612229 CCDC196A0A1B0GTZ2 297 aa8.03□□□□□ -1.12
PTPRT-209ENST00000612229 PSME1Q06323 249 aa8.03□□□□□ -1.12
PTPRT-209ENST00000612229 RAI14Q9P0K7 980 aa8.03□□□□□ -1.12
PTPRT-209ENST00000612229 YEATS4O95619 227 aa8.03□□□□□ -1.12
PTPRT-209ENST00000612229 ATP2A2P16615 1042 aaKnown RBP8.03□□□□□ -1.12
PTPRT-209ENST00000612229 C10orf67Q8IYJ2 551 aa8.03□□□□□ -1.12
PTPRT-209ENST00000612229 MRPS9P82933 396 aaKnown RBP8.03□□□□□ -1.12
PTPRT-209ENST00000612229 CCDC94Q9BW85 323 aaPredicted RBP8.03□□□□□ -1.12
PTPRT-209ENST00000612229 CWC25Q9NXE8 425 aaPredicted RBP8.03□□□□□ -1.12
PTPRT-209ENST00000612229 ITSN2Q9NZM3 1697 aa8.02□□□□□ -1.12
PTPRT-209ENST00000612229 STK3Q13188 491 aa8.02□□□□□ -1.12
PTPRT-209ENST00000612229 MTHFSP49914 203 aa8.02□□□□□ -1.13
PTPRT-209ENST00000612229 ZNF710Q8N1W2 664 aa8.02□□□□□ -1.13
PTPRT-209ENST00000612229 IPO4Q8TEX9 1081 aaKnown RBP8.02□□□□□ -1.13
PTPRT-209ENST00000612229 ADCY5O95622 1261 aa8.02□□□□□ -1.13
PTPRT-209ENST00000612229 CCDC155Q8N6L0 562 aa8.02□□□□□ -1.13
PTPRT-209ENST00000612229 CDCA7LQ96GN5 454 aa8.02□□□□□ -1.13
PTPRT-209ENST00000612229 RABGAP1Q9Y3P9 1069 aa8.02□□□□□ -1.13
PTPRT-209ENST00000612229 HSF2BPO75031 334 aa8.02□□□□□ -1.13
PTPRT-209ENST00000612229 KIAA1107Q9UPP5 1409 aa8.02□□□□□ -1.13
PTPRT-209ENST00000612229 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.02□□□□□ -1.13
PTPRT-209ENST00000612229 ATP5DP30049 168 aa8.02□□□□□ -1.13
PTPRT-209ENST00000612229 UBE2HP62256 183 aa8.02□□□□□ -1.13
PTPRT-209ENST00000612229 USP25Q9UHP3 1055 aa8.02□□□□□ -1.13
PTPRT-209ENST00000612229 SNX16P57768 344 aa8.02□□□□□ -1.13
PTPRT-209ENST00000612229 PPP1R14CQ8TAE6 165 aa8.02□□□□□ -1.13
PTPRT-209ENST00000612229 NUP88Q99567 741 aaPredicted RBP8.02□□□□□ -1.13
PTPRT-209ENST00000612229 LUC7L2Q9Y383 392 aaKnown RBP8.02□□□□□ -1.13
PTPRT-209ENST00000612229 SARNPP82979 210 aaKnown RBP8.02□□□□□ -1.13
PTPRT-209ENST00000612229 CCDC113Q9H0I3 377 aa8.02□□□□□ -1.13
PTPRT-209ENST00000612229 MATR3P43243 847 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTPRT-209ENST00000612229 MPNDQ8N594 471 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 FBF1Q8TES7 1133 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 RBM25P49756 843 aaKnown RBP8.01□□□□□ -1.13
PTPRT-209ENST00000612229 TTC31Q49AM3 519 aaPredicted RBP8.01□□□□□ -1.13
PTPRT-209ENST00000612229 SMC1BQ8NDV3 1235 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 RAPGEF4Q8WZA2 1011 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 C1orf115Q9H7X2 142 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 SEC63Q9UGP8 760 aaKnown RBP8.01□□□□□ -1.13
PTPRT-209ENST00000612229 CCDC178Q5BJE1 867 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 TNPO1Q92973 898 aaKnown RBP8.01□□□□□ -1.13
PTPRT-209ENST00000612229 GOPCQ9HD26 462 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 CUL7Q14999 1698 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 TDRD9Q8NDG6 1382 aaKnown RBP8.01□□□□□ -1.13
PTPRT-209ENST00000612229 A0A1B0GUA9 196 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 CAMK4Q16566 473 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 SPECC1Q5M775 1068 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 AMPD3Q01432 767 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 CLUL1Q15846 466 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 KIF5BP33176 963 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 IRX4P78413 519 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 DZIP1Q86YF9 867 aaKnown RBP8.01□□□□□ -1.13
PTPRT-209ENST00000612229 CEP120Q8N960 986 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 UBAC1Q9BSL1 405 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 AK9Q5TCS8 1911 aa8.01□□□□□ -1.13
PTPRT-209ENST00000612229 KANK3Q6NY19 840 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms