RNA–Protein interactions for RNA: ENST00000611138.1

FAM228B-206, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 2

Gene FAM228B, Length 362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-206ENST00000611138 MYH14Q7Z406 1995 aaKnown RBP11.23□□□□□ -0.61
FAM228B-206ENST00000611138 LOC102724428A0A0B4J2F2 783 aa11.22□□□□□ -0.61
FAM228B-206ENST00000611138 ATP6V1AP38606 617 aa11.22□□□□□ -0.61
FAM228B-206ENST00000611138 SIK1P57059 783 aa11.22□□□□□ -0.61
FAM228B-206ENST00000611138 IL16Q14005 1332 aa11.22□□□□□ -0.61
FAM228B-206ENST00000611138 TXNRD1Q16881 649 aa11.22□□□□□ -0.61
FAM228B-206ENST00000611138 QSER1Q2KHR3 1735 aa11.22□□□□□ -0.61
FAM228B-206ENST00000611138 ZNF496Q96IT1 587 aaPredicted RBP11.22□□□□□ -0.61
FAM228B-206ENST00000611138 CAMKK2Q96RR4 588 aa11.22□□□□□ -0.61
FAM228B-206ENST00000611138 MBIPQ9NS73 344 aa11.22□□□□□ -0.61
FAM228B-206ENST00000611138 HEG1Q9ULI3 1381 aa11.22□□□□□ -0.61
FAM228B-206ENST00000611138 ZBED9Q6R2W3 1325 aa11.21□□□□□ -0.61
FAM228B-206ENST00000611138 FANCIQ9NVI1 1328 aa11.21□□□□□ -0.61
FAM228B-206ENST00000611138 CHL1O00533 1208 aa11.21□□□□□ -0.61
FAM228B-206ENST00000611138 SOCS7O14512 581 aa11.21□□□□□ -0.61
FAM228B-206ENST00000611138 ZNF853P0CG23 659 aa11.21□□□□□ -0.61
FAM228B-206ENST00000611138 GOLGA2Q08379 1002 aa11.21□□□□□ -0.61
FAM228B-206ENST00000611138 ITPK1Q13572 414 aa11.21□□□□□ -0.61
FAM228B-206ENST00000611138 PROM2Q8N271 834 aa11.21□□□□□ -0.61
FAM228B-206ENST00000611138 FMNL2Q96PY5 1086 aa11.21□□□□□ -0.61
FAM228B-206ENST00000611138 SLC4A9Q96Q91 983 aa11.21□□□□□ -0.61
FAM228B-206ENST00000611138 BABAM1Q9NWV8 329 aa11.21□□□□□ -0.61
FAM228B-206ENST00000611138 C4AP0C0L4 1744 aa11.21□□□□□ -0.62
FAM228B-206ENST00000611138 EIF4A1P60842 406 aaKnown RBP11.2□□□□□ -0.62
FAM228B-206ENST00000611138 KRT24Q2M2I5 525 aa11.2□□□□□ -0.62
FAM228B-206ENST00000611138 SLC27A3Q5K4L6 730 aa11.2□□□□□ -0.62
FAM228B-206ENST00000611138 DNAJC10Q8IXB1 793 aa11.2□□□□□ -0.62
FAM228B-206ENST00000611138 CDCA7LQ96GN5 454 aa11.2□□□□□ -0.62
FAM228B-206ENST00000611138 LRRC4BQ9NT99 713 aa11.2□□□□□ -0.62
FAM228B-206ENST00000611138 PRAMEF22A3QJZ6 481 aa11.19□□□□□ -0.62
FAM228B-206ENST00000611138 LINC00116Q8NCU8 138 aa11.19□□□□□ -0.62
FAM228B-206ENST00000611138 MYH16Q9H6N6 1097 aa11.19□□□□□ -0.62
FAM228B-206ENST00000611138 E9PSI1 815 aa11.18□□□□□ -0.62
FAM228B-206ENST00000611138 ELL2O00472 640 aaPredicted RBP11.17□□□□□ -0.62
FAM228B-206ENST00000611138 SNRPA1P09661 255 aaKnown RBP11.17□□□□□ -0.62
FAM228B-206ENST00000611138 SLFN5Q08AF3 891 aa11.17□□□□□ -0.62
FAM228B-206ENST00000611138 VSIG10Q8N0Z9 540 aa11.17□□□□□ -0.62
FAM228B-206ENST00000611138 PCDH10Q9P2E7 1040 aa11.17□□□□□ -0.62
FAM228B-206ENST00000611138 CACNA1FO60840 1977 aa11.16□□□□□ -0.62
FAM228B-206ENST00000611138 GIGYF1O75420 1035 aaPredicted RBP11.16□□□□□ -0.62
FAM228B-206ENST00000611138 EXOSC9Q06265 439 aaKnown RBP11.16□□□□□ -0.62
FAM228B-206ENST00000611138 ZNF827Q17R98 1081 aa11.16□□□□□ -0.62
FAM228B-206ENST00000611138 C8orf58Q8NAV2 365 aa11.16□□□□□ -0.62
FAM228B-206ENST00000611138 NECTIN2Q92692 538 aa11.16□□□□□ -0.62
FAM228B-206ENST00000611138 ANO8Q9HCE9 1232 aaPredicted RBP11.16□□□□□ -0.62
FAM228B-206ENST00000611138 BCORQ6W2J9 1755 aa11.16□□□□□ -0.62
FAM228B-206ENST00000611138 CYP19A1P11511 503 aaPredicted RBP11.15□□□□□ -0.62
FAM228B-206ENST00000611138 EIF2S2P20042 333 aaKnown RBP11.15□□□□□ -0.62
FAM228B-206ENST00000611138 PIP4K2AP48426 406 aaPredicted RBP11.15□□□□□ -0.62
FAM228B-206ENST00000611138 DUSP27Q5VZP5 1158 aa11.15□□□□□ -0.62
FAM228B-206ENST00000611138 TSPYL6Q8N831 410 aa11.15□□□□□ -0.62
FAM228B-206ENST00000611138 AK7Q96M32 723 aa11.15□□□□□ -0.62
FAM228B-206ENST00000611138 TEX13AQ9BXU3 409 aaPredicted RBP11.15□□□□□ -0.62
FAM228B-206ENST00000611138 USP16Q9Y5T5 823 aa11.15□□□□□ -0.62
FAM228B-206ENST00000611138 CASZ1Q86V15 1759 aa11.15□□□□□ -0.62
FAM228B-206ENST00000611138 SCN7AQ01118 1682 aa11.14□□□□□ -0.63
FAM228B-206ENST00000611138 CNTNAP4Q9C0A0 1308 aa11.14□□□□□ -0.63
FAM228B-206ENST00000611138 GNPATO15228 680 aa11.14□□□□□ -0.63
FAM228B-206ENST00000611138 STARD3NLO95772 234 aa11.14□□□□□ -0.63
FAM228B-206ENST00000611138 CRKLP46109 303 aaKnown RBP11.14□□□□□ -0.63
FAM228B-206ENST00000611138 TWISTNBQ3B726 338 aaPredicted RBP11.14□□□□□ -0.63
FAM228B-206ENST00000611138 CCDC87Q9NVE4 849 aa11.14□□□□□ -0.63
FAM228B-206ENST00000611138 STK32BQ9NY57 414 aa11.14□□□□□ -0.63
FAM228B-206ENST00000611138 ZBTB1Q9Y2K1 713 aa11.14□□□□□ -0.63
FAM228B-206ENST00000611138 ARFGEF2Q9Y6D5 1785 aa11.13□□□□□ -0.63
FAM228B-206ENST00000611138 PHF14O94880 888 aa11.13□□□□□ -0.63
FAM228B-206ENST00000611138 A1BGP04217 495 aa11.13□□□□□ -0.63
FAM228B-206ENST00000611138 CANXP27824 592 aaKnown RBP11.13□□□□□ -0.63
FAM228B-206ENST00000611138 HDGFL1Q5TGJ6 251 aa11.13□□□□□ -0.63
FAM228B-206ENST00000611138 NBPF14Q5TI25 921 aa11.13□□□□□ -0.63
FAM228B-206ENST00000611138 INTS5Q6P9B9 1019 aaKnown RBP11.13□□□□□ -0.63
FAM228B-206ENST00000611138 SMIM5Q71RC9 77 aa11.13□□□□□ -0.63
FAM228B-206ENST00000611138 TRMT2AQ8IZ69 625 aaKnown RBP11.13□□□□□ -0.63
FAM228B-206ENST00000611138 ZNF330Q9Y3S2 320 aaPredicted RBP11.13□□□□□ -0.63
FAM228B-206ENST00000611138 ANKRD36CQ5JPF3 1778 aa11.13□□□□□ -0.63
FAM228B-206ENST00000611138 NUP98P52948 1817 aa11.12□□□□□ -0.63
FAM228B-206ENST00000611138 TCERG1O14776 1098 aaKnown RBP11.12□□□□□ -0.63
FAM228B-206ENST00000611138 HOXB7P09629 217 aa11.12□□□□□ -0.63
FAM228B-206ENST00000611138 SLC15A2Q16348 729 aa11.12□□□□□ -0.63
FAM228B-206ENST00000611138 RC3H1Q5TC82 1133 aaKnown RBP11.12□□□□□ -0.63
FAM228B-206ENST00000611138 AMIGO3Q86WK7 504 aa11.12□□□□□ -0.63
FAM228B-206ENST00000611138 TFCP2L1Q9NZI6 479 aa11.12□□□□□ -0.63
FAM228B-206ENST00000611138 PSDA5PKW4 1024 aaPredicted RBP11.11□□□□□ -0.63
FAM228B-206ENST00000611138 NBPF26B4DH59 902 aa11.11□□□□□ -0.63
FAM228B-206ENST00000611138 ANXA1P04083 346 aa11.11□□□□□ -0.63
FAM228B-206ENST00000611138 MYL6BP14649 208 aa11.11□□□□□ -0.63
FAM228B-206ENST00000611138 HMGB2P26583 209 aaKnown RBP11.11□□□□□ -0.63
FAM228B-206ENST00000611138 R3HDM1Q15032 1099 aaKnown RBP11.11□□□□□ -0.63
FAM228B-206ENST00000611138 NBPF10Q6P3W6 841 aaKnown RBP11.11□□□□□ -0.63
FAM228B-206ENST00000611138 NBPF15Q8N660 670 aa11.11□□□□□ -0.63
FAM228B-206ENST00000611138 CHPF2Q9P2E5 772 aa11.11□□□□□ -0.63
FAM228B-206ENST00000611138 RTCBQ9Y3I0 505 aaKnown RBP11.11□□□□□ -0.63
FAM228B-206ENST00000611138 COL15A1P39059 1388 aa11.11□□□□□ -0.63
FAM228B-206ENST00000611138 SOS1Q07889 1333 aaPredicted RBP11.1□□□□□ -0.63
FAM228B-206ENST00000611138 AFDNP55196 1824 aaKnown RBP11.1□□□□□ -0.63
FAM228B-206ENST00000611138 VAMP4O75379 141 aa11.1□□□□□ -0.63
FAM228B-206ENST00000611138 PROSER3Q2NL68 480 aa11.1□□□□□ -0.63
FAM228B-206ENST00000611138 PNPLA7Q6ZV29 1317 aa11.09□□□□□ -0.63
FAM228B-206ENST00000611138 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.09□□□□□ -0.63
FAM228B-206ENST00000611138 RPS6KA4O75676 772 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms