RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 RRP7AQ9Y3A4 280 aaKnown RBP16.87■□□□□ 0.29
CD9-212ENST00000610354 RIPK4P57078 832 aa16.86■□□□□ 0.29
CD9-212ENST00000610354 TAF7Q15545 349 aaPredicted RBP16.86■□□□□ 0.29
CD9-212ENST00000610354 TRAPPC3LQ5T215 181 aa16.86■□□□□ 0.29
CD9-212ENST00000610354 RUNDC1Q96C34 613 aa16.86■□□□□ 0.29
CD9-212ENST00000610354 CCDC87Q9NVE4 849 aa16.86■□□□□ 0.29
CD9-212ENST00000610354 KDM3BQ7LBC6 1761 aa16.86■□□□□ 0.29
CD9-212ENST00000610354 FHDC1Q9C0D6 1143 aaPredicted RBP16.85■□□□□ 0.29
CD9-212ENST00000610354 ZBTB1Q9Y2K1 713 aa16.85■□□□□ 0.29
CD9-212ENST00000610354 PRAMEF22A3QJZ6 481 aa16.84■□□□□ 0.29
CD9-212ENST00000610354 ANP32CO43423 234 aa16.84■□□□□ 0.29
CD9-212ENST00000610354 FMNL2Q96PY5 1086 aa16.84■□□□□ 0.29
CD9-212ENST00000610354 SOS1Q07889 1333 aaPredicted RBP16.83■□□□□ 0.29
CD9-212ENST00000610354 POLD1P28340 1107 aa16.83■□□□□ 0.28
CD9-212ENST00000610354 SYT17Q9BSW7 474 aa16.83■□□□□ 0.28
CD9-212ENST00000610354 SRP68Q9UHB9 627 aaKnown RBP16.83■□□□□ 0.28
CD9-212ENST00000610354 TRIM35Q9UPQ4 493 aa16.83■□□□□ 0.28
CD9-212ENST00000610354 GYS1P13807 737 aa16.82■□□□□ 0.28
CD9-212ENST00000610354 NEUROD2Q15784 382 aa16.82■□□□□ 0.28
CD9-212ENST00000610354 USP16Q9Y5T5 823 aa16.82■□□□□ 0.28
CD9-212ENST00000610354 PNISRQ8TF01 805 aaKnown RBP16.81■□□□□ 0.28
CD9-212ENST00000610354 A1BGP04217 495 aa16.8■□□□□ 0.28
CD9-212ENST00000610354 CANXP27824 592 aaKnown RBP16.8■□□□□ 0.28
CD9-212ENST00000610354 RFC4P35249 363 aa16.8■□□□□ 0.28
CD9-212ENST00000610354 USP42Q9H9J4 1324 aaKnown RBP16.8■□□□□ 0.28
CD9-212ENST00000610354 APAF1O14727 1248 aa16.79■□□□□ 0.28
CD9-212ENST00000610354 STARD3NLO95772 234 aa16.79■□□□□ 0.28
CD9-212ENST00000610354 EIF5P55010 431 aaKnown RBP16.79■□□□□ 0.28
CD9-212ENST00000610354 EIF4A1P60842 406 aaKnown RBP16.79■□□□□ 0.28
CD9-212ENST00000610354 TEX13AQ9BXU3 409 aaPredicted RBP16.79■□□□□ 0.28
CD9-212ENST00000610354 COL15A1P39059 1388 aa16.78■□□□□ 0.28
CD9-212ENST00000610354 SNRPA1P09661 255 aaKnown RBP16.78■□□□□ 0.28
CD9-212ENST00000610354 MRS2Q9HD23 443 aa16.78■□□□□ 0.28
CD9-212ENST00000610354 MMP10P09238 476 aa16.77■□□□□ 0.28
CD9-212ENST00000610354 PIP4K2AP48426 406 aaPredicted RBP16.77■□□□□ 0.28
CD9-212ENST00000610354 FKBP8Q14318 412 aa16.77■□□□□ 0.28
CD9-212ENST00000610354 NLGN2Q8NFZ4 835 aa16.77■□□□□ 0.28
CD9-212ENST00000610354 BCL2L12Q9HB09 334 aa16.77■□□□□ 0.28
CD9-212ENST00000610354 LMOD3Q0VAK6 560 aa16.76■□□□□ 0.27
CD9-212ENST00000610354 USPL1Q5W0Q7 1092 aa16.76■□□□□ 0.27
CD9-212ENST00000610354 KLHL34Q8N239 644 aa16.76■□□□□ 0.27
CD9-212ENST00000610354 NLGN1Q8N2Q7 840 aa16.76■□□□□ 0.27
CD9-212ENST00000610354 NARFQ9UHQ1 456 aa16.76■□□□□ 0.27
CD9-212ENST00000610354 LAMB4A4D0S4 1761 aa16.76■□□□□ 0.27
CD9-212ENST00000610354 SENP3-EIF4A1A0A087X0R7 540 aa16.75■□□□□ 0.27
CD9-212ENST00000610354 NBPF26B4DH59 902 aa16.75■□□□□ 0.27
CD9-212ENST00000610354 GIGYF1O75420 1035 aaPredicted RBP16.75■□□□□ 0.27
CD9-212ENST00000610354 NBPF10Q6P3W6 841 aaKnown RBP16.75■□□□□ 0.27
CD9-212ENST00000610354 NBPF15Q8N660 670 aa16.75■□□□□ 0.27
CD9-212ENST00000610354 IL6STP40189 918 aaPredicted RBP16.74■□□□□ 0.27
CD9-212ENST00000610354 DDR1Q08345 913 aa16.74■□□□□ 0.27
CD9-212ENST00000610354 TSPYL4Q9UJ04 414 aa16.74■□□□□ 0.27
CD9-212ENST00000610354 KIF13BQ9NQT8 1826 aa16.74■□□□□ 0.27
CD9-212ENST00000610354 CHL1O00533 1208 aa16.73■□□□□ 0.27
CD9-212ENST00000610354 TM4SF1P30408 202 aa16.73■□□□□ 0.27
CD9-212ENST00000610354 BABAM1Q9NWV8 329 aa16.73■□□□□ 0.27
CD9-212ENST00000610354 KIAA1551Q9HCM1 1747 aa16.73■□□□□ 0.27
CD9-212ENST00000610354 ZPR1O75312 459 aa16.72■□□□□ 0.27
CD9-212ENST00000610354 TBC1D2BQ9UPU7 963 aa16.72■□□□□ 0.27
CD9-212ENST00000610354 CD2APQ9Y5K6 639 aa16.72■□□□□ 0.27
CD9-212ENST00000610354 AFDNP55196 1824 aaKnown RBP16.72■□□□□ 0.27
CD9-212ENST00000610354 SCN7AQ01118 1682 aa16.72■□□□□ 0.27
CD9-212ENST00000610354 KRT24Q2M2I5 525 aa16.71■□□□□ 0.27
CD9-212ENST00000610354 BCORQ6W2J9 1755 aa16.71■□□□□ 0.26
CD9-212ENST00000610354 A0A087WZG4 1122 aa16.7■□□□□ 0.26
CD9-212ENST00000610354 POLRMTO00411 1230 aaKnown RBP16.7■□□□□ 0.26
CD9-212ENST00000610354 CAMTA2O94983 1202 aa16.7■□□□□ 0.26
CD9-212ENST00000610354 ZNF853P0CG23 659 aa16.7■□□□□ 0.26
CD9-212ENST00000610354 NFIXQ14938 502 aa16.7■□□□□ 0.26
CD9-212ENST00000610354 ZNF330Q9Y3S2 320 aaPredicted RBP16.7■□□□□ 0.26
CD9-212ENST00000610354 LAS1LQ9Y4W2 734 aaKnown RBP16.7■□□□□ 0.26
CD9-212ENST00000610354 NRXN2Q9P2S2 1712 aa16.69■□□□□ 0.26
CD9-212ENST00000610354 C10orf71Q711Q0 1435 aa16.69■□□□□ 0.26
CD9-212ENST00000610354 N4BP2Q86UW6 1770 aaPredicted RBP16.69■□□□□ 0.26
CD9-212ENST00000610354 PARP3Q9Y6F1 533 aa16.69■□□□□ 0.26
CD9-212ENST00000610354 TBC1D9BQ66K14 1250 aa16.68■□□□□ 0.26
CD9-212ENST00000610354 DZIP3Q86Y13 1208 aaKnown RBP16.68■□□□□ 0.26
CD9-212ENST00000610354 CFAP44Q96MT7 982 aa16.68■□□□□ 0.26
CD9-212ENST00000610354 MBIPQ9NS73 344 aa16.68■□□□□ 0.26
CD9-212ENST00000610354 PDIA6Q15084 440 aa16.67■□□□□ 0.26
CD9-212ENST00000610354 LRP10Q7Z4F1 713 aa16.67■□□□□ 0.26
CD9-212ENST00000610354 PXDNLA1KZ92 1463 aa16.66■□□□□ 0.26
CD9-212ENST00000610354 YBX3P16989 372 aaKnown RBP eCLIP16.66■□□□□ 0.26
CD9-212ENST00000610354 FAM9BQ8IZU0 186 aa16.66■□□□□ 0.26
CD9-212ENST00000610354 EIF2S2P20042 333 aaKnown RBP16.65■□□□□ 0.26
CD9-212ENST00000610354 CCDC27Q2M243 656 aa16.65■□□□□ 0.26
CD9-212ENST00000610354 PROSER3Q2NL68 480 aa16.65■□□□□ 0.26
CD9-212ENST00000610354 BICDL1Q6ZP65 573 aa16.65■□□□□ 0.26
CD9-212ENST00000610354 WWC1Q8IX03 1113 aa16.65■□□□□ 0.26
CD9-212ENST00000610354 IFT57Q9NWB7 429 aa16.65■□□□□ 0.26
CD9-212ENST00000610354 NUP98P52948 1817 aa16.64■□□□□ 0.25
CD9-212ENST00000610354 ANXA1P04083 346 aa16.64■□□□□ 0.25
CD9-212ENST00000610354 SERPINB2P05120 415 aa16.64■□□□□ 0.25
CD9-212ENST00000610354 MYL6BP14649 208 aa16.64■□□□□ 0.25
CD9-212ENST00000610354 HLFQ16534 295 aa16.64■□□□□ 0.25
CD9-212ENST00000610354 TTLL7Q6ZT98 887 aa16.64■□□□□ 0.25
CD9-212ENST00000610354 NGEFQ8N5V2 710 aa16.64■□□□□ 0.25
CD9-212ENST00000610354 BRCA1P38398 1863 aaKnown RBP16.63■□□□□ 0.25
CD9-212ENST00000610354 A0A0G2JLW4 131 aa16.63■□□□□ 0.25
CD9-212ENST00000610354 KCNA3P22001 575 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms