RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 HEG1Q9ULI3 1381 aa25.41■■□□□ 1.66
CTSA-217ENST00000607482 A0A087WZG4 1122 aa25.4■■□□□ 1.66
CTSA-217ENST00000607482 YBX3P16989 372 aaKnown RBP eCLIP25.4■■□□□ 1.66
CTSA-217ENST00000607482 FKBP8Q14318 412 aa25.4■■□□□ 1.66
CTSA-217ENST00000607482 USPL1Q5W0Q7 1092 aa25.4■■□□□ 1.66
CTSA-217ENST00000607482 GOLGB1Q14789 3259 aaKnown RBP25.39■■□□□ 1.66
CTSA-217ENST00000607482 MYBBP1AQ9BQG0 1328 aaKnown RBP25.39■■□□□ 1.66
CTSA-217ENST00000607482 COL15A1P39059 1388 aa25.39■■□□□ 1.65
CTSA-217ENST00000607482 NARFQ9UHQ1 456 aa25.38■■□□□ 1.65
CTSA-217ENST00000607482 CICQ96RK0 1608 aaPredicted RBP25.37■■□□□ 1.65
CTSA-217ENST00000607482 TGFB2P61812 414 aa25.37■■□□□ 1.65
CTSA-217ENST00000607482 TAF7Q15545 349 aaPredicted RBP25.37■■□□□ 1.65
CTSA-217ENST00000607482 KCNQ3O43525 872 aa25.36■■□□□ 1.65
CTSA-217ENST00000607482 WDR43Q15061 677 aaKnown RBP eCLIP25.36■■□□□ 1.65
CTSA-217ENST00000607482 NFE2L2Q16236 605 aa25.36■■□□□ 1.65
CTSA-217ENST00000607482 C4AP0C0L4 1744 aa25.34■■□□□ 1.65
CTSA-217ENST00000607482 A0A0G2JLW4 131 aa25.34■■□□□ 1.65
CTSA-217ENST00000607482 SNRPA1P09661 255 aaKnown RBP25.34■■□□□ 1.65
CTSA-217ENST00000607482 PNISRQ8TF01 805 aaKnown RBP25.34■■□□□ 1.65
CTSA-217ENST00000607482 UBR2Q8IWV8 1755 aa25.33■■□□□ 1.65
CTSA-217ENST00000607482 CHD4Q14839 1912 aa25.33■■□□□ 1.65
CTSA-217ENST00000607482 PLEKHF1Q96S99 279 aa25.33■■□□□ 1.65
CTSA-217ENST00000607482 ZNF784Q8NCA9 323 aaPredicted RBP25.32■■□□□ 1.64
CTSA-217ENST00000607482 MIS18AQ9NYP9 233 aa25.32■■□□□ 1.64
CTSA-217ENST00000607482 BCS1LQ9Y276 419 aa25.32■■□□□ 1.64
CTSA-217ENST00000607482 A1BGP04217 495 aa25.31■■□□□ 1.64
CTSA-217ENST00000607482 IL6STP40189 918 aaPredicted RBP25.31■■□□□ 1.64
CTSA-217ENST00000607482 EIF5P55010 431 aaKnown RBP25.31■■□□□ 1.64
CTSA-217ENST00000607482 BICDL1Q6ZP65 573 aa25.31■■□□□ 1.64
CTSA-217ENST00000607482 SIPA1L3O60292 1781 aaPredicted RBP25.31■■□□□ 1.64
CTSA-217ENST00000607482 NPHP1O15259 732 aa25.3■■□□□ 1.64
CTSA-217ENST00000607482 DPEP1P16444 411 aa25.3■■□□□ 1.64
CTSA-217ENST00000607482 DDR1Q08345 913 aa25.3■■□□□ 1.64
CTSA-217ENST00000607482 TBC1D2BQ9UPU7 963 aa25.3■■□□□ 1.64
CTSA-217ENST00000607482 C10orf71Q711Q0 1435 aa25.29■■□□□ 1.64
CTSA-217ENST00000607482 TM4SF1P30408 202 aa25.29■■□□□ 1.64
CTSA-217ENST00000607482 RIPK4P57078 832 aa25.29■■□□□ 1.64
CTSA-217ENST00000607482 POLRMTO00411 1230 aaKnown RBP25.28■■□□□ 1.64
CTSA-217ENST00000607482 LMOD3Q0VAK6 560 aa25.28■■□□□ 1.64
CTSA-217ENST00000607482 NFIXQ14938 502 aa25.28■■□□□ 1.64
CTSA-217ENST00000607482 USP16Q9Y5T5 823 aa25.28■■□□□ 1.64
CTSA-217ENST00000607482 THUMPD2Q9BTF0 503 aaKnown RBP25.27■■□□□ 1.64
CTSA-217ENST00000607482 PIM2Q9P1W9 311 aa25.26■■□□□ 1.63
CTSA-217ENST00000607482 PXDNLA1KZ92 1463 aa25.26■■□□□ 1.63
CTSA-217ENST00000607482 SERPINB2P05120 415 aa25.25■■□□□ 1.63
CTSA-217ENST00000607482 NEUROD2Q15784 382 aa25.25■■□□□ 1.63
CTSA-217ENST00000607482 CCDC146Q8IYE0 955 aa25.25■■□□□ 1.63
CTSA-217ENST00000607482 PRKRIP1Q9H875 184 aaPredicted RBP25.25■■□□□ 1.63
CTSA-217ENST00000607482 PRAMEF22A3QJZ6 481 aa25.24■■□□□ 1.63
CTSA-217ENST00000607482 PIP4K2AP48426 406 aaPredicted RBP25.24■■□□□ 1.63
CTSA-217ENST00000607482 DZIP3Q86Y13 1208 aaKnown RBP25.24■■□□□ 1.63
CTSA-217ENST00000607482 DALRD3Q5D0E6 543 aaKnown RBP25.23■■□□□ 1.63
CTSA-217ENST00000607482 ARHGAP27Q6ZUM4 889 aa25.23■■□□□ 1.63
CTSA-217ENST00000607482 SETDB2Q96T68 719 aa25.23■■□□□ 1.63
CTSA-217ENST00000607482 BCL2L12Q9HB09 334 aa25.23■■□□□ 1.63
CTSA-217ENST00000607482 TSPYL4Q9UJ04 414 aa25.22■■□□□ 1.63
CTSA-217ENST00000607482 ZNF652Q9Y2D9 606 aa25.22■■□□□ 1.63
CTSA-217ENST00000607482 TMPOP42166 694 aaKnown RBP25.21■■□□□ 1.63
CTSA-217ENST00000607482 TBC1D9BQ66K14 1250 aa25.21■■□□□ 1.63
CTSA-217ENST00000607482 RRP7AQ9Y3A4 280 aaKnown RBP25.21■■□□□ 1.63
CTSA-217ENST00000607482 N4BP2Q86UW6 1770 aaPredicted RBP25.21■■□□□ 1.63
CTSA-217ENST00000607482 CHRNA5P30532 468 aa25.2■■□□□ 1.62
CTSA-217ENST00000607482 RUNDC1Q96C34 613 aa25.2■■□□□ 1.62
CTSA-217ENST00000607482 KIF13BQ9NQT8 1826 aa25.19■■□□□ 1.62
CTSA-217ENST00000607482 DLG5Q8TDM6 1919 aa25.19■■□□□ 1.62
CTSA-217ENST00000607482 NGEFQ8N5V2 710 aa25.18■■□□□ 1.62
CTSA-217ENST00000607482 ADAMTS8Q9UP79 889 aa25.18■■□□□ 1.62
CTSA-217ENST00000607482 H0YIN7 160 aa25.17■■□□□ 1.62
CTSA-217ENST00000607482 CAMTA2O94983 1202 aa25.17■■□□□ 1.62
CTSA-217ENST00000607482 EIF4A1P60842 406 aaKnown RBP25.17■■□□□ 1.62
CTSA-217ENST00000607482 CARMIL3Q8ND23 1372 aa25.17■■□□□ 1.62
CTSA-217ENST00000607482 GIGYF1O75420 1035 aaPredicted RBP25.16■■□□□ 1.62
CTSA-217ENST00000607482 C2CD5Q86YS7 1000 aa25.16■■□□□ 1.62
CTSA-217ENST00000607482 LAS1LQ9Y4W2 734 aaKnown RBP25.16■■□□□ 1.62
CTSA-217ENST00000607482 KCNA3P22001 575 aa25.15■■□□□ 1.62
CTSA-217ENST00000607482 ST5P78524 1137 aa25.15■■□□□ 1.62
CTSA-217ENST00000607482 CNBD1Q8NA66 436 aa25.15■■□□□ 1.62
CTSA-217ENST00000607482 ZNF526Q8TF50 670 aaPredicted RBP25.15■■□□□ 1.62
CTSA-217ENST00000607482 PDE6BP35913 854 aa25.14■■□□□ 1.62
CTSA-217ENST00000607482 GPBP1L1Q9HC44 474 aaPredicted RBP25.14■■□□□ 1.62
CTSA-217ENST00000607482 ZNF316A6NFI3 1004 aaPredicted RBP25.13■■□□□ 1.61
CTSA-217ENST00000607482 NBPF26B4DH59 902 aa25.13■■□□□ 1.61
CTSA-217ENST00000607482 NBPF10Q6P3W6 841 aaKnown RBP25.13■■□□□ 1.61
CTSA-217ENST00000607482 CLEC4GQ6UXB4 293 aa25.13■■□□□ 1.61
CTSA-217ENST00000607482 KIF6Q6ZMV9 814 aa25.13■■□□□ 1.61
CTSA-217ENST00000607482 NBPF5PQ86XG9 351 aaPredicted RBP25.13■■□□□ 1.61
CTSA-217ENST00000607482 NBPF15Q8N660 670 aa25.13■■□□□ 1.61
CTSA-217ENST00000607482 MYL6BP14649 208 aa25.12■■□□□ 1.61
CTSA-217ENST00000607482 BABAM1Q9NWV8 329 aa25.12■■□□□ 1.61
CTSA-217ENST00000607482 ATP10DQ9P241 1426 aa25.12■■□□□ 1.61
CTSA-217ENST00000607482 GTF2E1P29083 439 aaPredicted RBP25.11■■□□□ 1.61
CTSA-217ENST00000607482 CCDC24Q8N4L8 307 aa25.11■■□□□ 1.61
CTSA-217ENST00000607482 ZNF622Q969S3 477 aaKnown RBP eCLIP25.11■■□□□ 1.61
CTSA-217ENST00000607482 BRIP1Q9BX63 1249 aa25.11■■□□□ 1.61
CTSA-217ENST00000607482 PDZRN3Q9UPQ7 1066 aa25.11■■□□□ 1.61
CTSA-217ENST00000607482 EIF2S2P20042 333 aaKnown RBP25.1■■□□□ 1.61
CTSA-217ENST00000607482 PRR5LQ6MZQ0 368 aa25.1■■□□□ 1.61
CTSA-217ENST00000607482 TTLL6Q8N841 843 aa25.1■■□□□ 1.61
CTSA-217ENST00000607482 NIP7Q9Y221 180 aaKnown RBP eCLIP25.1■■□□□ 1.61
CTSA-217ENST00000607482 SCN7AQ01118 1682 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms