RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 SLC16A10Q8TF71 515 aa12.31□□□□□ -0.44
SQSTM1P1-201ENST00000603451 MBIPQ9NS73 344 aa12.31□□□□□ -0.44
SQSTM1P1-201ENST00000603451 CCDC87Q9NVE4 849 aa12.31□□□□□ -0.44
SQSTM1P1-201ENST00000603451 BCORQ6W2J9 1755 aa12.3□□□□□ -0.44
SQSTM1P1-201ENST00000603451 RGL2O15211 777 aa12.3□□□□□ -0.44
SQSTM1P1-201ENST00000603451 RPS6KA4O75676 772 aa12.3□□□□□ -0.44
SQSTM1P1-201ENST00000603451 CRKLP46109 303 aaKnown RBP12.3□□□□□ -0.44
SQSTM1P1-201ENST00000603451 GOLGA2Q08379 1002 aa12.3□□□□□ -0.44
SQSTM1P1-201ENST00000603451 ZNF827Q17R98 1081 aa12.3□□□□□ -0.44
SQSTM1P1-201ENST00000603451 DNAJC10Q8IXB1 793 aa12.3□□□□□ -0.44
SQSTM1P1-201ENST00000603451 TFCP2L1Q9NZI6 479 aa12.3□□□□□ -0.44
SQSTM1P1-201ENST00000603451 RTCBQ9Y3I0 505 aaKnown RBP12.3□□□□□ -0.44
SQSTM1P1-201ENST00000603451 E9PSI1 815 aa12.29□□□□□ -0.44
SQSTM1P1-201ENST00000603451 KCNQ3O43525 872 aa12.29□□□□□ -0.44
SQSTM1P1-201ENST00000603451 IL6STP40189 918 aaPredicted RBP12.29□□□□□ -0.44
SQSTM1P1-201ENST00000603451 ZBED9Q6R2W3 1325 aa12.29□□□□□ -0.44
SQSTM1P1-201ENST00000603451 PNPLA7Q6ZV29 1317 aa12.29□□□□□ -0.44
SQSTM1P1-201ENST00000603451 COL15A1P39059 1388 aa12.29□□□□□ -0.44
SQSTM1P1-201ENST00000603451 GNPATO15228 680 aa12.28□□□□□ -0.44
SQSTM1P1-201ENST00000603451 MIS18AQ9NYP9 233 aa12.28□□□□□ -0.44
SQSTM1P1-201ENST00000603451 LAS1LQ9Y4W2 734 aaKnown RBP12.28□□□□□ -0.44
SQSTM1P1-201ENST00000603451 FANCIQ9NVI1 1328 aa12.28□□□□□ -0.44
SQSTM1P1-201ENST00000603451 A0A087WZG4 1122 aa12.27□□□□□ -0.45
SQSTM1P1-201ENST00000603451 KCNQ4P56696 695 aa12.27□□□□□ -0.45
SQSTM1P1-201ENST00000603451 R3HDM1Q15032 1099 aaKnown RBP12.27□□□□□ -0.45
SQSTM1P1-201ENST00000603451 INTS5Q6P9B9 1019 aaKnown RBP12.27□□□□□ -0.45
SQSTM1P1-201ENST00000603451 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.26□□□□□ -0.45
SQSTM1P1-201ENST00000603451 HNRNPUQ00839 825 aaKnown RBP eCLIP12.26□□□□□ -0.45
SQSTM1P1-201ENST00000603451 NPM2Q86SE8 214 aaKnown RBP12.26□□□□□ -0.45
SQSTM1P1-201ENST00000603451 ZNF428Q96B54 188 aa12.26□□□□□ -0.45
SQSTM1P1-201ENST00000603451 ZBTB1Q9Y2K1 713 aa12.26□□□□□ -0.45
SQSTM1P1-201ENST00000603451 CT47B1P0C2W7 299 aaPredicted RBP12.25□□□□□ -0.45
SQSTM1P1-201ENST00000603451 EIF5P55010 431 aaKnown RBP12.25□□□□□ -0.45
SQSTM1P1-201ENST00000603451 TRAPPC3LQ5T215 181 aa12.25□□□□□ -0.45
SQSTM1P1-201ENST00000603451 MTFR1LQ9H019 292 aa12.25□□□□□ -0.45
SQSTM1P1-201ENST00000603451 USP16Q9Y5T5 823 aa12.25□□□□□ -0.45
SQSTM1P1-201ENST00000603451 SLFN5Q08AF3 891 aa12.24□□□□□ -0.45
SQSTM1P1-201ENST00000603451 HDGFL1Q5TGJ6 251 aa12.24□□□□□ -0.45
SQSTM1P1-201ENST00000603451 DUSP27Q5VZP5 1158 aa12.24□□□□□ -0.45
SQSTM1P1-201ENST00000603451 TRMT2AQ8IZ69 625 aaKnown RBP12.24□□□□□ -0.45
SQSTM1P1-201ENST00000603451 TSR2Q969E8 191 aaKnown RBP12.24□□□□□ -0.45
SQSTM1P1-201ENST00000603451 USP42Q9H9J4 1324 aaKnown RBP12.24□□□□□ -0.45
SQSTM1P1-201ENST00000603451 DBF4Q9UBU7 674 aaPredicted RBP12.24□□□□□ -0.45
SQSTM1P1-201ENST00000603451 SALL2Q9Y467 1007 aaPredicted RBP12.24□□□□□ -0.45
SQSTM1P1-201ENST00000603451 ANKRD36CQ5JPF3 1778 aa12.23□□□□□ -0.45
SQSTM1P1-201ENST00000603451 RFC4P35249 363 aa12.23□□□□□ -0.45
SQSTM1P1-201ENST00000603451 TWISTNBQ3B726 338 aaPredicted RBP12.23□□□□□ -0.45
SQSTM1P1-201ENST00000603451 CCDC30Q5VVM6 783 aa12.23□□□□□ -0.45
SQSTM1P1-201ENST00000603451 DDX21Q9NR30 783 aaKnown RBP eCLIP12.23□□□□□ -0.45
SQSTM1P1-201ENST00000603451 PRAMEF22A3QJZ6 481 aa12.22□□□□□ -0.45
SQSTM1P1-201ENST00000603451 PSDA5PKW4 1024 aaPredicted RBP12.22□□□□□ -0.45
SQSTM1P1-201ENST00000603451 CANXP27824 592 aaKnown RBP12.22□□□□□ -0.45
SQSTM1P1-201ENST00000603451 COL23A1Q86Y22 540 aaPredicted RBP12.22□□□□□ -0.45
SQSTM1P1-201ENST00000603451 ARHGEF1Q92888 912 aaKnown RBP12.22□□□□□ -0.45
SQSTM1P1-201ENST00000603451 HYPKQ9NX55 129 aa12.22□□□□□ -0.45
SQSTM1P1-201ENST00000603451 NARFQ9UHQ1 456 aa12.22□□□□□ -0.45
SQSTM1P1-201ENST00000603451 NRXN2Q9P2S2 1712 aa12.21□□□□□ -0.45
SQSTM1P1-201ENST00000603451 ZPR1O75312 459 aa12.21□□□□□ -0.45
SQSTM1P1-201ENST00000603451 PHF14O94880 888 aa12.21□□□□□ -0.45
SQSTM1P1-201ENST00000603451 A1BGP04217 495 aa12.21□□□□□ -0.45
SQSTM1P1-201ENST00000603451 CLEC4GQ6UXB4 293 aa12.21□□□□□ -0.45
SQSTM1P1-201ENST00000603451 NLGN1Q8N2Q7 840 aa12.21□□□□□ -0.45
SQSTM1P1-201ENST00000603451 STK31Q9BXU1 1019 aa12.21□□□□□ -0.45
SQSTM1P1-201ENST00000603451 SPON1Q9HCB6 807 aa12.21□□□□□ -0.45
SQSTM1P1-201ENST00000603451 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.45
SQSTM1P1-201ENST00000603451 ZNF652Q9Y2D9 606 aa12.21□□□□□ -0.45
SQSTM1P1-201ENST00000603451 NUP98P52948 1817 aa12.21□□□□□ -0.46
SQSTM1P1-201ENST00000603451 ATP10DQ9P241 1426 aa12.2□□□□□ -0.46
SQSTM1P1-201ENST00000603451 ARFGEF2Q9Y6D5 1785 aa12.2□□□□□ -0.46
SQSTM1P1-201ENST00000603451 NBPF26B4DH59 902 aa12.2□□□□□ -0.46
SQSTM1P1-201ENST00000603451 ERVV-1B6SEH8 477 aa12.2□□□□□ -0.46
SQSTM1P1-201ENST00000603451 PDIA6Q15084 440 aa12.2□□□□□ -0.46
SQSTM1P1-201ENST00000603451 KRT24Q2M2I5 525 aa12.2□□□□□ -0.46
SQSTM1P1-201ENST00000603451 NBPF10Q6P3W6 841 aaKnown RBP12.2□□□□□ -0.46
SQSTM1P1-201ENST00000603451 LRP10Q7Z4F1 713 aa12.2□□□□□ -0.46
SQSTM1P1-201ENST00000603451 AMIGO3Q86WK7 504 aa12.2□□□□□ -0.46
SQSTM1P1-201ENST00000603451 NBPF15Q8N660 670 aa12.2□□□□□ -0.46
SQSTM1P1-201ENST00000603451 C8orf58Q8NAV2 365 aa12.2□□□□□ -0.46
SQSTM1P1-201ENST00000603451 KIF13BQ9NQT8 1826 aa12.2□□□□□ -0.46
SQSTM1P1-201ENST00000603451 MSH5O43196 834 aa12.19□□□□□ -0.46
SQSTM1P1-201ENST00000603451 GYS1P13807 737 aa12.19□□□□□ -0.46
SQSTM1P1-201ENST00000603451 EIF2S2P20042 333 aaKnown RBP12.19□□□□□ -0.46
SQSTM1P1-201ENST00000603451 EXOSC9Q06265 439 aaKnown RBP12.19□□□□□ -0.46
SQSTM1P1-201ENST00000603451 KIF6Q6ZMV9 814 aa12.19□□□□□ -0.46
SQSTM1P1-201ENST00000603451 DZIP3Q86Y13 1208 aaKnown RBP12.19□□□□□ -0.46
SQSTM1P1-201ENST00000603451 CHPF2Q9P2E5 772 aa12.19□□□□□ -0.46
SQSTM1P1-201ENST00000603451 IBTKQ9P2D0 1353 aaPredicted RBP12.18□□□□□ -0.46
SQSTM1P1-201ENST00000603451 MAP3K15Q6ZN16 1313 aa12.18□□□□□ -0.46
SQSTM1P1-201ENST00000603451 SENP3-EIF4A1A0A087X0R7 540 aa12.18□□□□□ -0.46
SQSTM1P1-201ENST00000603451 VAMP4O75379 141 aa12.18□□□□□ -0.46
SQSTM1P1-201ENST00000603451 POLD1P28340 1107 aa12.18□□□□□ -0.46
SQSTM1P1-201ENST00000603451 TSPYL6Q8N831 410 aa12.18□□□□□ -0.46
SQSTM1P1-201ENST00000603451 CAMTA2O94983 1202 aa12.17□□□□□ -0.46
SQSTM1P1-201ENST00000603451 ALDH1L2Q3SY69 923 aa12.17□□□□□ -0.46
SQSTM1P1-201ENST00000603451 SGIP1Q9BQI5 828 aa12.17□□□□□ -0.46
SQSTM1P1-201ENST00000603451 N4BP2Q86UW6 1770 aaPredicted RBP12.17□□□□□ -0.46
SQSTM1P1-201ENST00000603451 CARMIL3Q8ND23 1372 aa12.17□□□□□ -0.46
SQSTM1P1-201ENST00000603451 ELL2O00472 640 aaPredicted RBP12.16□□□□□ -0.46
SQSTM1P1-201ENST00000603451 DDX58O95786 925 aaKnown RBP12.16□□□□□ -0.46
SQSTM1P1-201ENST00000603451 MYL6BP14649 208 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms