RNA–Protein interactions for RNA: ENST00000602878.5

LINC00472-206, long intergenic non-protein coding RNA 472, humanhuman

TSL 2

Gene LINC00472, Length 717 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-206ENST00000602878 SOS1Q07889 1333 aaPredicted RBP15.48■□□□□ 0.07
LINC00472-206ENST00000602878 USP42Q9H9J4 1324 aaKnown RBP15.48■□□□□ 0.07
LINC00472-206ENST00000602878 KCNQ3O43525 872 aa15.48■□□□□ 0.07
LINC00472-206ENST00000602878 STARD3NLO95772 234 aa15.48■□□□□ 0.07
LINC00472-206ENST00000602878 FMNL2Q96PY5 1086 aa15.48■□□□□ 0.07
LINC00472-206ENST00000602878 CANXP27824 592 aaKnown RBP15.47■□□□□ 0.07
LINC00472-206ENST00000602878 TEX13AQ9BXU3 409 aaPredicted RBP15.47■□□□□ 0.07
LINC00472-206ENST00000602878 MAPK8IP3Q9UPT6 1336 aa15.46■□□□□ 0.07
LINC00472-206ENST00000602878 ZPR1O75312 459 aa15.46■□□□□ 0.07
LINC00472-206ENST00000602878 FKBP8Q14318 412 aa15.46■□□□□ 0.07
LINC00472-206ENST00000602878 USPL1Q5W0Q7 1092 aa15.46■□□□□ 0.07
LINC00472-206ENST00000602878 PARP3Q9Y6F1 533 aa15.46■□□□□ 0.07
LINC00472-206ENST00000602878 KIF13BQ9NQT8 1826 aa15.45■□□□□ 0.06
LINC00472-206ENST00000602878 TAF7Q15545 349 aaPredicted RBP15.45■□□□□ 0.06
LINC00472-206ENST00000602878 NFE2L2Q16236 605 aa15.45■□□□□ 0.06
LINC00472-206ENST00000602878 PRKRIP1Q9H875 184 aaPredicted RBP15.45■□□□□ 0.06
LINC00472-206ENST00000602878 COL15A1P39059 1388 aa15.45■□□□□ 0.06
LINC00472-206ENST00000602878 YBX3P16989 372 aaKnown RBP eCLIP15.44■□□□□ 0.06
LINC00472-206ENST00000602878 NARFQ9UHQ1 456 aa15.44■□□□□ 0.06
LINC00472-206ENST00000602878 N4BP2Q86UW6 1770 aaPredicted RBP15.44■□□□□ 0.06
LINC00472-206ENST00000602878 GRIN3BO60391 1043 aa15.43■□□□□ 0.06
LINC00472-206ENST00000602878 MIS18AQ9NYP9 233 aa15.43■□□□□ 0.06
LINC00472-206ENST00000602878 WWC3Q9ULE0 1092 aa15.43■□□□□ 0.06
LINC00472-206ENST00000602878 PRAMEF22A3QJZ6 481 aa15.42■□□□□ 0.06
LINC00472-206ENST00000602878 A1BGP04217 495 aa15.42■□□□□ 0.06
LINC00472-206ENST00000602878 EIF5P55010 431 aaKnown RBP15.42■□□□□ 0.06
LINC00472-206ENST00000602878 THUMPD2Q9BTF0 503 aaKnown RBP15.42■□□□□ 0.06
LINC00472-206ENST00000602878 ZNF330Q9Y3S2 320 aaPredicted RBP15.42■□□□□ 0.06
LINC00472-206ENST00000602878 USP16Q9Y5T5 823 aa15.42■□□□□ 0.06
LINC00472-206ENST00000602878 A0A087WZG4 1122 aa15.41■□□□□ 0.06
LINC00472-206ENST00000602878 ANP32CO43423 234 aa15.41■□□□□ 0.06
LINC00472-206ENST00000602878 SNRPA1P09661 255 aaKnown RBP15.41■□□□□ 0.06
LINC00472-206ENST00000602878 TM4SF1P30408 202 aa15.41■□□□□ 0.06
LINC00472-206ENST00000602878 TGFB2P61812 414 aa15.41■□□□□ 0.06
LINC00472-206ENST00000602878 DDR1Q08345 913 aa15.41■□□□□ 0.06
LINC00472-206ENST00000602878 WDR43Q15061 677 aaKnown RBP eCLIP15.41■□□□□ 0.06
LINC00472-206ENST00000602878 C10orf71Q711Q0 1435 aa15.41■□□□□ 0.06
LINC00472-206ENST00000602878 AFDNP55196 1824 aaKnown RBP15.4■□□□□ 0.06
LINC00472-206ENST00000602878 KIAA1551Q9HCM1 1747 aa15.4■□□□□ 0.06
LINC00472-206ENST00000602878 KDM3BQ7LBC6 1761 aa15.4■□□□□ 0.06
LINC00472-206ENST00000602878 POLRMTO00411 1230 aaKnown RBP15.4■□□□□ 0.06
LINC00472-206ENST00000602878 IL6STP40189 918 aaPredicted RBP15.4■□□□□ 0.06
LINC00472-206ENST00000602878 RIPK4P57078 832 aa15.4■□□□□ 0.06
LINC00472-206ENST00000602878 NPM2Q86SE8 214 aaKnown RBP15.4■□□□□ 0.06
LINC00472-206ENST00000602878 PNISRQ8TF01 805 aaKnown RBP15.4■□□□□ 0.06
LINC00472-206ENST00000602878 BCL2L12Q9HB09 334 aa15.4■□□□□ 0.06
LINC00472-206ENST00000602878 A0A0G2JLW4 131 aa15.39■□□□□ 0.05
LINC00472-206ENST00000602878 TMPOP42166 694 aaKnown RBP15.39■□□□□ 0.05
LINC00472-206ENST00000602878 NFIXQ14938 502 aa15.39■□□□□ 0.05
LINC00472-206ENST00000602878 CCDC146Q8IYE0 955 aa15.39■□□□□ 0.05
LINC00472-206ENST00000602878 TBC1D2BQ9UPU7 963 aa15.39■□□□□ 0.05
LINC00472-206ENST00000602878 PXDNLA1KZ92 1463 aa15.39■□□□□ 0.05
LINC00472-206ENST00000602878 PIP4K2AP48426 406 aaPredicted RBP15.38■□□□□ 0.05
LINC00472-206ENST00000602878 ADAMTS8Q9UP79 889 aa15.38■□□□□ 0.05
LINC00472-206ENST00000602878 DPEP1P16444 411 aa15.37■□□□□ 0.05
LINC00472-206ENST00000602878 NEUROD2Q15784 382 aa15.37■□□□□ 0.05
LINC00472-206ENST00000602878 BICDL1Q6ZP65 573 aa15.37■□□□□ 0.05
LINC00472-206ENST00000602878 RUNDC1Q96C34 613 aa15.37■□□□□ 0.05
LINC00472-206ENST00000602878 RRP7AQ9Y3A4 280 aaKnown RBP15.37■□□□□ 0.05
LINC00472-206ENST00000602878 BRCA1P38398 1863 aaKnown RBP15.37■□□□□ 0.05
LINC00472-206ENST00000602878 SCN7AQ01118 1682 aa15.36■□□□□ 0.05
LINC00472-206ENST00000602878 LAMB4A4D0S4 1761 aa15.36■□□□□ 0.05
LINC00472-206ENST00000602878 SERPINB2P05120 415 aa15.35■□□□□ 0.05
LINC00472-206ENST00000602878 EIF4A1P60842 406 aaKnown RBP15.35■□□□□ 0.05
LINC00472-206ENST00000602878 LMOD3Q0VAK6 560 aa15.35■□□□□ 0.05
LINC00472-206ENST00000602878 DZIP3Q86Y13 1208 aaKnown RBP15.35■□□□□ 0.05
LINC00472-206ENST00000602878 ZNF784Q8NCA9 323 aaPredicted RBP15.35■□□□□ 0.05
LINC00472-206ENST00000602878 BCS1LQ9Y276 419 aa15.35■□□□□ 0.05
LINC00472-206ENST00000602878 NRXN2Q9P2S2 1712 aa15.34■□□□□ 0.05
LINC00472-206ENST00000602878 NBPF26B4DH59 902 aa15.34■□□□□ 0.05
LINC00472-206ENST00000602878 GIGYF1O75420 1035 aaPredicted RBP15.34■□□□□ 0.05
LINC00472-206ENST00000602878 CAMTA2O94983 1202 aa15.34■□□□□ 0.05
LINC00472-206ENST00000602878 TBC1D9BQ66K14 1250 aa15.34■□□□□ 0.05
LINC00472-206ENST00000602878 NBPF10Q6P3W6 841 aaKnown RBP15.34■□□□□ 0.05
LINC00472-206ENST00000602878 NBPF15Q8N660 670 aa15.34■□□□□ 0.05
LINC00472-206ENST00000602878 TSPYL4Q9UJ04 414 aa15.34■□□□□ 0.05
LINC00472-206ENST00000602878 BCORQ6W2J9 1755 aa15.34■□□□□ 0.05
LINC00472-206ENST00000602878 KCNA3P22001 575 aa15.33■□□□□ 0.04
LINC00472-206ENST00000602878 CHRNA5P30532 468 aa15.32■□□□□ 0.04
LINC00472-206ENST00000602878 PIM2Q9P1W9 311 aa15.32■□□□□ 0.04
LINC00472-206ENST00000602878 ARFGEF1Q9Y6D6 1849 aa15.31■□□□□ 0.04
LINC00472-206ENST00000602878 SETDB2Q96T68 719 aa15.31■□□□□ 0.04
LINC00472-206ENST00000602878 TRIM35Q9UPQ4 493 aa15.31■□□□□ 0.04
LINC00472-206ENST00000602878 CCER2I3L3R5 266 aa15.3■□□□□ 0.04
LINC00472-206ENST00000602878 NGEFQ8N5V2 710 aa15.3■□□□□ 0.04
LINC00472-206ENST00000602878 BABAM1Q9NWV8 329 aa15.3■□□□□ 0.04
LINC00472-206ENST00000602878 CARMIL3Q8ND23 1372 aa15.29■□□□□ 0.04
LINC00472-206ENST00000602878 CCDC184Q52MB2 194 aa15.29■□□□□ 0.04
LINC00472-206ENST00000602878 DALRD3Q5D0E6 543 aaKnown RBP15.29■□□□□ 0.04
LINC00472-206ENST00000602878 CLEC4GQ6UXB4 293 aa15.29■□□□□ 0.04
LINC00472-206ENST00000602878 ZNF652Q9Y2D9 606 aa15.29■□□□□ 0.04
LINC00472-206ENST00000602878 LAS1LQ9Y4W2 734 aaKnown RBP15.29■□□□□ 0.04
LINC00472-206ENST00000602878 ANKRD31Q8N7Z5 1873 aa15.29■□□□□ 0.04
LINC00472-206ENST00000602878 MYL6BP14649 208 aa15.28■□□□□ 0.04
LINC00472-206ENST00000602878 PRR5LQ6MZQ0 368 aa15.28■□□□□ 0.04
LINC00472-206ENST00000602878 ARHGAP27Q6ZUM4 889 aa15.28■□□□□ 0.04
LINC00472-206ENST00000602878 CCDC24Q8N4L8 307 aa15.28■□□□□ 0.04
LINC00472-206ENST00000602878 NUP98P52948 1817 aa15.28■□□□□ 0.04
LINC00472-206ENST00000602878 DLEC1Q9Y238 1755 aa15.28■□□□□ 0.04
LINC00472-206ENST00000602878 APAF1O14727 1248 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms