RNA–Protein interactions for RNA: ENST00000602544.5

SFXN2-206, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-206ENST00000602544 MRS2Q9HD23 443 aa19.37■□□□□ 0.69
SFXN2-206ENST00000602544 QSER1Q2KHR3 1735 aa19.37■□□□□ 0.69
SFXN2-206ENST00000602544 SOS1Q07889 1333 aaPredicted RBP19.36■□□□□ 0.69
SFXN2-206ENST00000602544 SRP68Q9UHB9 627 aaKnown RBP19.36■□□□□ 0.69
SFXN2-206ENST00000602544 TSPYL4Q9UJ04 414 aa19.36■□□□□ 0.69
SFXN2-206ENST00000602544 PARP3Q9Y6F1 533 aa19.36■□□□□ 0.69
SFXN2-206ENST00000602544 TAF1LQ8IZX4 1826 aa19.36■□□□□ 0.69
SFXN2-206ENST00000602544 GYS1P13807 737 aa19.35■□□□□ 0.69
SFXN2-206ENST00000602544 ZNF831Q5JPB2 1677 aa19.35■□□□□ 0.69
SFXN2-206ENST00000602544 A1BGP04217 495 aa19.34■□□□□ 0.69
SFXN2-206ENST00000602544 PELP1Q8IZL8 1130 aaKnown RBP19.34■□□□□ 0.69
SFXN2-206ENST00000602544 LAS1LQ9Y4W2 734 aaKnown RBP19.34■□□□□ 0.69
SFXN2-206ENST00000602544 CD2APQ9Y5K6 639 aa19.34■□□□□ 0.69
SFXN2-206ENST00000602544 USP42Q9H9J4 1324 aaKnown RBP19.33■□□□□ 0.69
SFXN2-206ENST00000602544 GPR162Q16538 588 aa19.33■□□□□ 0.68
SFXN2-206ENST00000602544 USPL1Q5W0Q7 1092 aa19.33■□□□□ 0.68
SFXN2-206ENST00000602544 USP16Q9Y5T5 823 aa19.33■□□□□ 0.68
SFXN2-206ENST00000602544 COL15A1P39059 1388 aa19.32■□□□□ 0.68
SFXN2-206ENST00000602544 TUBGCP6Q96RT7 1819 aa19.32■□□□□ 0.68
SFXN2-206ENST00000602544 NARFQ9UHQ1 456 aa19.32■□□□□ 0.68
SFXN2-206ENST00000602544 APAF1O14727 1248 aa19.31■□□□□ 0.68
SFXN2-206ENST00000602544 IL6STP40189 918 aaPredicted RBP19.31■□□□□ 0.68
SFXN2-206ENST00000602544 EIF5P55010 431 aaKnown RBP19.31■□□□□ 0.68
SFXN2-206ENST00000602544 FKBP8Q14318 412 aa19.31■□□□□ 0.68
SFXN2-206ENST00000602544 CCDC184Q52MB2 194 aa19.31■□□□□ 0.68
SFXN2-206ENST00000602544 BABAM1Q9NWV8 329 aa19.31■□□□□ 0.68
SFXN2-206ENST00000602544 PRAMEF22A3QJZ6 481 aa19.3■□□□□ 0.68
SFXN2-206ENST00000602544 EIF4A1P60842 406 aaKnown RBP19.3■□□□□ 0.68
SFXN2-206ENST00000602544 NLGN2Q8NFZ4 835 aa19.3■□□□□ 0.68
SFXN2-206ENST00000602544 UBR3Q6ZT12 1888 aa19.3■□□□□ 0.68
SFXN2-206ENST00000602544 CALD1Q05682 793 aaKnown RBP19.29■□□□□ 0.68
SFXN2-206ENST00000602544 TRIM35Q9UPQ4 493 aa19.28■□□□□ 0.68
SFXN2-206ENST00000602544 TBC1D2BQ9UPU7 963 aa19.28■□□□□ 0.68
SFXN2-206ENST00000602544 TJP1Q07157 1748 aa19.28■□□□□ 0.68
SFXN2-206ENST00000602544 GIGYF1O75420 1035 aaPredicted RBP19.27■□□□□ 0.68
SFXN2-206ENST00000602544 PIP4K2AP48426 406 aaPredicted RBP19.27■□□□□ 0.68
SFXN2-206ENST00000602544 COL5A3P25940 1745 aaPredicted RBP19.27■□□□□ 0.68
SFXN2-206ENST00000602544 BICDL1Q6ZP65 573 aa19.26■□□□□ 0.67
SFXN2-206ENST00000602544 DZIP3Q86Y13 1208 aaKnown RBP19.26■□□□□ 0.67
SFXN2-206ENST00000602544 CICQ96RK0 1608 aaPredicted RBP19.25■□□□□ 0.67
SFXN2-206ENST00000602544 NPHP1O15259 732 aa19.24■□□□□ 0.67
SFXN2-206ENST00000602544 EIF2S2P20042 333 aaKnown RBP19.24■□□□□ 0.67
SFXN2-206ENST00000602544 TM4SF1P30408 202 aa19.24■□□□□ 0.67
SFXN2-206ENST00000602544 NGEFQ8N5V2 710 aa19.24■□□□□ 0.67
SFXN2-206ENST00000602544 ZNF652Q9Y2D9 606 aa19.24■□□□□ 0.67
SFXN2-206ENST00000602544 CHL1O00533 1208 aa19.23■□□□□ 0.67
SFXN2-206ENST00000602544 TGFB2P61812 414 aa19.23■□□□□ 0.67
SFXN2-206ENST00000602544 NFIXQ14938 502 aa19.23■□□□□ 0.67
SFXN2-206ENST00000602544 FAM9BQ8IZU0 186 aa19.23■□□□□ 0.67
SFXN2-206ENST00000602544 SIPA1L3O60292 1781 aaPredicted RBP19.23■□□□□ 0.67
SFXN2-206ENST00000602544 UBR2Q8IWV8 1755 aa19.23■□□□□ 0.67
SFXN2-206ENST00000602544 VIRMAQ69YN4 1812 aaKnown RBP19.23■□□□□ 0.67
SFXN2-206ENST00000602544 MYH14Q7Z406 1995 aaKnown RBP19.23■□□□□ 0.67
SFXN2-206ENST00000602544 POLRMTO00411 1230 aaKnown RBP19.22■□□□□ 0.67
SFXN2-206ENST00000602544 GRIN3BO60391 1043 aa19.22■□□□□ 0.67
SFXN2-206ENST00000602544 DDR1Q08345 913 aa19.22■□□□□ 0.67
SFXN2-206ENST00000602544 CFAP44Q96MT7 982 aa19.22■□□□□ 0.67
SFXN2-206ENST00000602544 SETDB2Q96T68 719 aa19.22■□□□□ 0.67
SFXN2-206ENST00000602544 NBPF26B4DH59 902 aa19.21■□□□□ 0.67
SFXN2-206ENST00000602544 MYL6BP14649 208 aa19.21■□□□□ 0.67
SFXN2-206ENST00000602544 GNAI1P63096 354 aa19.21■□□□□ 0.67
SFXN2-206ENST00000602544 NBPF10Q6P3W6 841 aaKnown RBP19.21■□□□□ 0.67
SFXN2-206ENST00000602544 NBPF15Q8N660 670 aa19.21■□□□□ 0.67
SFXN2-206ENST00000602544 BCL2L12Q9HB09 334 aa19.21■□□□□ 0.67
SFXN2-206ENST00000602544 CAMTA2O94983 1202 aa19.2■□□□□ 0.66
SFXN2-206ENST00000602544 SERPINB2P05120 415 aa19.2■□□□□ 0.66
SFXN2-206ENST00000602544 KIF6Q6ZMV9 814 aa19.2■□□□□ 0.66
SFXN2-206ENST00000602544 IFT57Q9NWB7 429 aa19.2■□□□□ 0.66
SFXN2-206ENST00000602544 WWC3Q9ULE0 1092 aa19.2■□□□□ 0.66
SFXN2-206ENST00000602544 SENP3-EIF4A1A0A087X0R7 540 aa19.19■□□□□ 0.66
SFXN2-206ENST00000602544 YY1P25490 414 aa19.19■□□□□ 0.66
SFXN2-206ENST00000602544 TBC1D9BQ66K14 1250 aa19.19■□□□□ 0.66
SFXN2-206ENST00000602544 CLEC4GQ6UXB4 293 aa19.19■□□□□ 0.66
SFXN2-206ENST00000602544 COL24A1Q17RW2 1714 aa19.19■□□□□ 0.66
SFXN2-206ENST00000602544 A0A0G2JLW4 131 aa19.18■□□□□ 0.66
SFXN2-206ENST00000602544 NECTIN2Q92692 538 aa19.18■□□□□ 0.66
SFXN2-206ENST00000602544 ERBB4Q15303 1308 aa19.18■□□□□ 0.66
SFXN2-206ENST00000602544 MBIPQ9NS73 344 aa19.17■□□□□ 0.66
SFXN2-206ENST00000602544 DLG5Q8TDM6 1919 aa19.17■□□□□ 0.66
SFXN2-206ENST00000602544 DPEP1P16444 411 aa19.16■□□□□ 0.66
SFXN2-206ENST00000602544 SALL2Q9Y467 1007 aaPredicted RBP19.16■□□□□ 0.66
SFXN2-206ENST00000602544 C10orf71Q711Q0 1435 aa19.16■□□□□ 0.66
SFXN2-206ENST00000602544 YBX3P16989 372 aaKnown RBP eCLIP19.15■□□□□ 0.66
SFXN2-206ENST00000602544 CCDC27Q2M243 656 aa19.15■□□□□ 0.66
SFXN2-206ENST00000602544 NIP7Q9Y221 180 aaKnown RBP eCLIP19.15■□□□□ 0.66
SFXN2-206ENST00000602544 CARMIL3Q8ND23 1372 aa19.15■□□□□ 0.66
SFXN2-206ENST00000602544 RGL2O15211 777 aa19.14■□□□□ 0.65
SFXN2-206ENST00000602544 HOXB7P09629 217 aa19.14■□□□□ 0.65
SFXN2-206ENST00000602544 ST5P78524 1137 aa19.14■□□□□ 0.65
SFXN2-206ENST00000602544 KRT24Q2M2I5 525 aa19.14■□□□□ 0.65
SFXN2-206ENST00000602544 HDGFL1Q5TGJ6 251 aa19.14■□□□□ 0.65
SFXN2-206ENST00000602544 DUSP27Q5VZP5 1158 aa19.14■□□□□ 0.65
SFXN2-206ENST00000602544 NBPF5PQ86XG9 351 aaPredicted RBP19.14■□□□□ 0.65
SFXN2-206ENST00000602544 WWC1Q8IX03 1113 aa19.14■□□□□ 0.65
SFXN2-206ENST00000602544 CNBD1Q8NA66 436 aa19.14■□□□□ 0.65
SFXN2-206ENST00000602544 CHMP4AQ9BY43 222 aa19.14■□□□□ 0.65
SFXN2-206ENST00000602544 PIM2Q9P1W9 311 aa19.14■□□□□ 0.65
SFXN2-206ENST00000602544 BCS1LQ9Y276 419 aa19.14■□□□□ 0.65
SFXN2-206ENST00000602544 ERVV-1B6SEH8 477 aa19.13■□□□□ 0.65
SFXN2-206ENST00000602544 ZNF853P0CG23 659 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms