RNA–Protein interactions for RNA: ENST00000602253.5

ZNF546-209, Transcript of zinc finger protein 546, humanhuman

TSL 3

Gene ZNF546, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-209ENST00000602253 SMC1BQ8NDV3 1235 aa6.36□□□□□ -1.39
ZNF546-209ENST00000602253 EPAS1Q99814 870 aa6.36□□□□□ -1.39
ZNF546-209ENST00000602253 USP6P35125 1406 aa6.35□□□□□ -1.39
ZNF546-209ENST00000602253 WDR17Q8IZU2 1322 aa6.35□□□□□ -1.39
ZNF546-209ENST00000602253 IGSF1Q8N6C5 1336 aa6.35□□□□□ -1.39
ZNF546-209ENST00000602253 GRXCR2A6NFK2 248 aa6.35□□□□□ -1.39
ZNF546-209ENST00000602253 PPP1R3GB7ZBB8 358 aa6.35□□□□□ -1.39
ZNF546-209ENST00000602253 TSR1Q2NL82 804 aaKnown RBP6.35□□□□□ -1.39
ZNF546-209ENST00000602253 PROX2Q3B8N5 592 aa6.35□□□□□ -1.39
ZNF546-209ENST00000602253 C6orf132Q5T0Z8 1188 aa6.35□□□□□ -1.39
ZNF546-209ENST00000602253 COL23A1Q86Y22 540 aaPredicted RBP6.35□□□□□ -1.39
ZNF546-209ENST00000602253 ABHD8Q96I13 439 aa6.35□□□□□ -1.39
ZNF546-209ENST00000602253 CARD10Q9BWT7 1032 aa6.35□□□□□ -1.39
ZNF546-209ENST00000602253 SLC4A5Q9BY07 1137 aa6.35□□□□□ -1.39
ZNF546-209ENST00000602253 KDM2BQ8NHM5 1336 aa6.34□□□□□ -1.39
ZNF546-209ENST00000602253 FOXN1O15353 648 aa6.34□□□□□ -1.39
ZNF546-209ENST00000602253 HMGB2P26583 209 aaKnown RBP6.34□□□□□ -1.39
ZNF546-209ENST00000602253 CTCFP49711 727 aaPredicted RBP6.34□□□□□ -1.39
ZNF546-209ENST00000602253 FLAD1Q8NFF5 587 aa6.34□□□□□ -1.39
ZNF546-209ENST00000602253 NUDT16Q96DE0 195 aaKnown RBP6.34□□□□□ -1.39
ZNF546-209ENST00000602253 RRAGCQ9HB90 399 aa6.34□□□□□ -1.39
ZNF546-209ENST00000602253 BTAF1O14981 1849 aa6.34□□□□□ -1.4
ZNF546-209ENST00000602253 NHSQ6T4R5 1651 aa6.33□□□□□ -1.4
ZNF546-209ENST00000602253 MINK1Q8N4C8 1332 aaPredicted RBP6.33□□□□□ -1.4
ZNF546-209ENST00000602253 ZBTB7CA1YPR0 619 aa6.33□□□□□ -1.4
ZNF546-209ENST00000602253 BHMG1C9JSJ3 638 aaPredicted RBP6.33□□□□□ -1.4
ZNF546-209ENST00000602253 MSL1Q68DK7 614 aa6.33□□□□□ -1.4
ZNF546-209ENST00000602253 ARHGAP27Q6ZUM4 889 aa6.33□□□□□ -1.4
ZNF546-209ENST00000602253 KIAA1210Q9ULL0 1709 aa6.33□□□□□ -1.4
ZNF546-209ENST00000602253 TUBGCP6Q96RT7 1819 aa6.32□□□□□ -1.4
ZNF546-209ENST00000602253 ACEP12821 1306 aa6.32□□□□□ -1.4
ZNF546-209ENST00000602253 CCDC85CA6NKD9 419 aa6.32□□□□□ -1.4
ZNF546-209ENST00000602253 MAP3K7O43318 606 aa6.32□□□□□ -1.4
ZNF546-209ENST00000602253 CSB-PGBD3P0DP91 1061 aa6.32□□□□□ -1.4
ZNF546-209ENST00000602253 CFAP70Q5T0N1 1121 aa6.32□□□□□ -1.4
ZNF546-209ENST00000602253 AIDAQ96BJ3 306 aa6.32□□□□□ -1.4
ZNF546-209ENST00000602253 KCTD12Q96CX2 325 aaKnown RBP6.32□□□□□ -1.4
ZNF546-209ENST00000602253 STAC3Q96MF2 364 aa6.32□□□□□ -1.4
ZNF546-209ENST00000602253 PIK3C2GO75747 1445 aa6.32□□□□□ -1.4
ZNF546-209ENST00000602253 C10orf71Q711Q0 1435 aa6.32□□□□□ -1.4
ZNF546-209ENST00000602253 WNK3Q9BYP7 1800 aa6.32□□□□□ -1.4
ZNF546-209ENST00000602253 PLEKHG3A1L390 1219 aa6.31□□□□□ -1.4
ZNF546-209ENST00000602253 OSBPP22059 807 aa6.31□□□□□ -1.4
ZNF546-209ENST00000602253 KCNQ4P56696 695 aa6.31□□□□□ -1.4
ZNF546-209ENST00000602253 C9orf131Q5VYM1 1079 aa6.31□□□□□ -1.4
ZNF546-209ENST00000602253 ARHGEF1Q92888 912 aaKnown RBP6.31□□□□□ -1.4
ZNF546-209ENST00000602253 POLR3AO14802 1390 aaPredicted RBP6.31□□□□□ -1.4
ZNF546-209ENST00000602253 CCDC7Q96M83 1385 aa6.31□□□□□ -1.4
ZNF546-209ENST00000602253 CICQ96RK0 1608 aaPredicted RBP6.3□□□□□ -1.4
ZNF546-209ENST00000602253 MLLT3P42568 568 aaPredicted RBP6.3□□□□□ -1.4
ZNF546-209ENST00000602253 LBX1P52954 281 aa6.3□□□□□ -1.4
ZNF546-209ENST00000602253 CDHR5Q9HBB8 845 aa6.3□□□□□ -1.4
ZNF546-209ENST00000602253 TRAK1Q9UPV9 953 aa6.3□□□□□ -1.4
ZNF546-209ENST00000602253 BCS1LQ9Y276 419 aa6.3□□□□□ -1.4
ZNF546-209ENST00000602253 ITSN1Q15811 1721 aa6.3□□□□□ -1.4
ZNF546-209ENST00000602253 PLEKHG2Q9H7P9 1386 aa6.3□□□□□ -1.4
ZNF546-209ENST00000602253 TRPM1Q7Z4N2 1603 aa6.29□□□□□ -1.4
ZNF546-209ENST00000602253 COL18A1P39060 1754 aa6.29□□□□□ -1.4
ZNF546-209ENST00000602253 VEGFAP15692 232 aaPredicted RBP6.29□□□□□ -1.4
ZNF546-209ENST00000602253 ITGAEP38570 1179 aa6.29□□□□□ -1.4
ZNF546-209ENST00000602253 TGFB2P61812 414 aa6.29□□□□□ -1.4
ZNF546-209ENST00000602253 MRPL50Q8N5N7 158 aaKnown RBP6.29□□□□□ -1.4
ZNF546-209ENST00000602253 KIAA1468Q9P260 1216 aa6.29□□□□□ -1.4
ZNF546-209ENST00000602253 RABGEF1Q9UJ41 708 aa6.29□□□□□ -1.4
ZNF546-209ENST00000602253 CCNL1Q9UK58 526 aaPredicted RBP6.29□□□□□ -1.4
ZNF546-209ENST00000602253 PXDNLA1KZ92 1463 aa6.28□□□□□ -1.4
ZNF546-209ENST00000602253 TRIM6-TRIM34B2RNG4 842 aa6.28□□□□□ -1.4
ZNF546-209ENST00000602253 NBPF3Q9H094 633 aa6.28□□□□□ -1.4
ZNF546-209ENST00000602253 WBP1LQ9NX94 342 aa6.28□□□□□ -1.4
ZNF546-209ENST00000602253 MKRN1Q9UHC7 482 aaKnown RBP6.28□□□□□ -1.4
ZNF546-209ENST00000602253 KDM2AQ9Y2K7 1162 aa6.28□□□□□ -1.4
ZNF546-209ENST00000602253 SPATA31E1Q6ZUB1 1445 aa6.27□□□□□ -1.41
ZNF546-209ENST00000602253 RGPD5Q99666 1765 aa6.27□□□□□ -1.41
ZNF546-209ENST00000602253 KCPQ6ZWJ8 1503 aa6.27□□□□□ -1.41
ZNF546-209ENST00000602253 IL2RBP14784 551 aa6.27□□□□□ -1.41
ZNF546-209ENST00000602253 ARHGEF25Q86VW2 580 aa6.27□□□□□ -1.41
ZNF546-209ENST00000602253 CDK19Q9BWU1 502 aa6.27□□□□□ -1.41
ZNF546-209ENST00000602253 HCSTQ9UBK5 93 aa6.27□□□□□ -1.41
ZNF546-209ENST00000602253 SEPT9Q9UHD8 586 aaPredicted RBP6.27□□□□□ -1.41
ZNF546-209ENST00000602253 TSKSQ9UJT2 592 aa6.27□□□□□ -1.41
ZNF546-209ENST00000602253 TNRC6CQ9HCJ0 1690 aaKnown RBP6.26□□□□□ -1.41
ZNF546-209ENST00000602253 PPIP5K1Q6PFW1 1433 aa6.26□□□□□ -1.41
ZNF546-209ENST00000602253 TNRC18O15417 2968 aaPredicted RBP6.26□□□□□ -1.41
ZNF546-209ENST00000602253 LY75O60449 1722 aa6.26□□□□□ -1.41
ZNF546-209ENST00000602253 A0A0G2JLW4 131 aa6.26□□□□□ -1.41
ZNF546-209ENST00000602253 GOLGA8CPA6NN73 597 aa6.26□□□□□ -1.41
ZNF546-209ENST00000602253 FCHSD2O94868 740 aa6.26□□□□□ -1.41
ZNF546-209ENST00000602253 PTPN5P54829 565 aa6.26□□□□□ -1.41
ZNF546-209ENST00000602253 KCNH5Q8NCM2 988 aa6.26□□□□□ -1.41
ZNF546-209ENST00000602253 WNT2BQ93097 391 aa6.26□□□□□ -1.41
ZNF546-209ENST00000602253 SYTL4Q96C24 671 aaPredicted RBP6.26□□□□□ -1.41
ZNF546-209ENST00000602253 RNF181Q9P0P0 153 aa6.26□□□□□ -1.41
ZNF546-209ENST00000602253 FAM198AQ9UFP1 575 aa6.26□□□□□ -1.41
ZNF546-209ENST00000602253 ABCC6O95255 1503 aa6.25□□□□□ -1.41
ZNF546-209ENST00000602253 C3orf80F5H4A9 247 aa6.25□□□□□ -1.41
ZNF546-209ENST00000602253 SEMA3EO15041 775 aa6.25□□□□□ -1.41
ZNF546-209ENST00000602253 HSPA8P11142 646 aaKnown RBP6.25□□□□□ -1.41
ZNF546-209ENST00000602253 THSD4Q6ZMP0 1018 aa6.25□□□□□ -1.41
ZNF546-209ENST00000602253 DDX54Q8TDD1 881 aaKnown RBP6.25□□□□□ -1.41
ZNF546-209ENST00000602253 CDCA7LQ96GN5 454 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms