RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 IL16Q14005 1332 aa18.8■□□□□ 0.6
USE1-210ENST00000601662 CYP19A1P11511 503 aaPredicted RBP18.79■□□□□ 0.6
USE1-210ENST00000601662 TAF7Q15545 349 aaPredicted RBP18.79■□□□□ 0.6
USE1-210ENST00000601662 ARHGEF1Q92888 912 aaKnown RBP18.79■□□□□ 0.6
USE1-210ENST00000601662 FMNL2Q96PY5 1086 aa18.79■□□□□ 0.6
USE1-210ENST00000601662 UBR3Q6ZT12 1888 aa18.79■□□□□ 0.6
USE1-210ENST00000601662 KCPQ6ZWJ8 1503 aa18.79■□□□□ 0.6
USE1-210ENST00000601662 RFC4P35249 363 aa18.78■□□□□ 0.6
USE1-210ENST00000601662 INTS5Q6P9B9 1019 aaKnown RBP18.78■□□□□ 0.6
USE1-210ENST00000601662 VSIG10Q8N0Z9 540 aa18.78■□□□□ 0.6
USE1-210ENST00000601662 FHDC1Q9C0D6 1143 aaPredicted RBP18.78■□□□□ 0.6
USE1-210ENST00000601662 CCDC87Q9NVE4 849 aa18.78■□□□□ 0.6
USE1-210ENST00000601662 MYH14Q7Z406 1995 aaKnown RBP18.77■□□□□ 0.6
USE1-210ENST00000601662 E9PSI1 815 aa18.77■□□□□ 0.6
USE1-210ENST00000601662 HEG1Q9ULI3 1381 aa18.77■□□□□ 0.6
USE1-210ENST00000601662 DLG5Q8TDM6 1919 aa18.76■□□□□ 0.59
USE1-210ENST00000601662 ZNF831Q5JPB2 1677 aa18.76■□□□□ 0.59
USE1-210ENST00000601662 STARD3NLO95772 234 aa18.76■□□□□ 0.59
USE1-210ENST00000601662 CANXP27824 592 aaKnown RBP18.76■□□□□ 0.59
USE1-210ENST00000601662 GNAI1P63096 354 aa18.76■□□□□ 0.59
USE1-210ENST00000601662 MYH16Q9H6N6 1097 aa18.76■□□□□ 0.59
USE1-210ENST00000601662 COL5A3P25940 1745 aaPredicted RBP18.76■□□□□ 0.59
USE1-210ENST00000601662 TJP1Q07157 1748 aa18.76■□□□□ 0.59
USE1-210ENST00000601662 ADRA2BP18089 450 aa18.75■□□□□ 0.59
USE1-210ENST00000601662 SYT17Q9BSW7 474 aa18.75■□□□□ 0.59
USE1-210ENST00000601662 BABAM1Q9NWV8 329 aa18.75■□□□□ 0.59
USE1-210ENST00000601662 ZBTB1Q9Y2K1 713 aa18.75■□□□□ 0.59
USE1-210ENST00000601662 SIPA1L3O60292 1781 aaPredicted RBP18.75■□□□□ 0.59
USE1-210ENST00000601662 SLFN5Q08AF3 891 aa18.74■□□□□ 0.59
USE1-210ENST00000601662 CFAP44Q96MT7 982 aa18.74■□□□□ 0.59
USE1-210ENST00000601662 TEX13AQ9BXU3 409 aaPredicted RBP18.74■□□□□ 0.59
USE1-210ENST00000601662 IFT57Q9NWB7 429 aa18.74■□□□□ 0.59
USE1-210ENST00000601662 SRP68Q9UHB9 627 aaKnown RBP18.74■□□□□ 0.59
USE1-210ENST00000601662 ZNF330Q9Y3S2 320 aaPredicted RBP18.74■□□□□ 0.59
USE1-210ENST00000601662 PRAMEF22A3QJZ6 481 aa18.73■□□□□ 0.59
USE1-210ENST00000601662 CENPBP07199 599 aaPredicted RBP18.73■□□□□ 0.59
USE1-210ENST00000601662 A1BGP04217 495 aa18.72■□□□□ 0.59
USE1-210ENST00000601662 USP16Q9Y5T5 823 aa18.72■□□□□ 0.59
USE1-210ENST00000601662 SOS1Q07889 1333 aaPredicted RBP18.72■□□□□ 0.59
USE1-210ENST00000601662 UBR2Q8IWV8 1755 aa18.71■□□□□ 0.59
USE1-210ENST00000601662 CHL1O00533 1208 aa18.71■□□□□ 0.59
USE1-210ENST00000601662 SNRPA1P09661 255 aaKnown RBP18.71■□□□□ 0.59
USE1-210ENST00000601662 TRMT2AQ8IZ69 625 aaKnown RBP18.71■□□□□ 0.59
USE1-210ENST00000601662 NLGN1Q8N2Q7 840 aa18.71■□□□□ 0.59
USE1-210ENST00000601662 CDCA7LQ96GN5 454 aa18.71■□□□□ 0.59
USE1-210ENST00000601662 LAS1LQ9Y4W2 734 aaKnown RBP18.71■□□□□ 0.59
USE1-210ENST00000601662 ZPR1O75312 459 aa18.7■□□□□ 0.58
USE1-210ENST00000601662 MMP10P09238 476 aa18.7■□□□□ 0.58
USE1-210ENST00000601662 ZNF853P0CG23 659 aa18.7■□□□□ 0.58
USE1-210ENST00000601662 GYS1P13807 737 aa18.7■□□□□ 0.58
USE1-210ENST00000601662 PIP4K2AP48426 406 aaPredicted RBP18.7■□□□□ 0.58
USE1-210ENST00000601662 TSPYL4Q9UJ04 414 aa18.7■□□□□ 0.58
USE1-210ENST00000601662 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
USE1-210ENST00000601662 FKBP8Q14318 412 aa18.68■□□□□ 0.58
USE1-210ENST00000601662 USPL1Q5W0Q7 1092 aa18.68■□□□□ 0.58
USE1-210ENST00000601662 NPM2Q86SE8 214 aaKnown RBP18.68■□□□□ 0.58
USE1-210ENST00000601662 SPINK5Q9NQ38 1064 aaPredicted RBP18.68■□□□□ 0.58
USE1-210ENST00000601662 USP42Q9H9J4 1324 aaKnown RBP18.68■□□□□ 0.58
USE1-210ENST00000601662 CICQ96RK0 1608 aaPredicted RBP18.67■□□□□ 0.58
USE1-210ENST00000601662 EIF5P55010 431 aaKnown RBP18.67■□□□□ 0.58
USE1-210ENST00000601662 EIF4A1P60842 406 aaKnown RBP18.67■□□□□ 0.58
USE1-210ENST00000601662 DUSP27Q5VZP5 1158 aa18.67■□□□□ 0.58
USE1-210ENST00000601662 NLGN2Q8NFZ4 835 aa18.67■□□□□ 0.58
USE1-210ENST00000601662 COL15A1P39059 1388 aa18.67■□□□□ 0.58
USE1-210ENST00000601662 COL24A1Q17RW2 1714 aa18.66■□□□□ 0.58
USE1-210ENST00000601662 PELP1Q8IZL8 1130 aaKnown RBP18.66■□□□□ 0.58
USE1-210ENST00000601662 NARFQ9UHQ1 456 aa18.66■□□□□ 0.58
USE1-210ENST00000601662 TBC1D2BQ9UPU7 963 aa18.66■□□□□ 0.58
USE1-210ENST00000601662 PARP3Q9Y6F1 533 aa18.66■□□□□ 0.58
USE1-210ENST00000601662 MBIPQ9NS73 344 aa18.65■□□□□ 0.58
USE1-210ENST00000601662 A0A087WZG4 1122 aa18.64■□□□□ 0.57
USE1-210ENST00000601662 GIGYF1O75420 1035 aaPredicted RBP18.64■□□□□ 0.57
USE1-210ENST00000601662 IL6STP40189 918 aaPredicted RBP18.64■□□□□ 0.57
USE1-210ENST00000601662 FANCIQ9NVI1 1328 aa18.64■□□□□ 0.57
USE1-210ENST00000601662 C4AP0C0L4 1744 aa18.63■□□□□ 0.57
USE1-210ENST00000601662 CT47B1P0C2W7 299 aaPredicted RBP18.63■□□□□ 0.57
USE1-210ENST00000601662 TSR2Q969E8 191 aaKnown RBP18.63■□□□□ 0.57
USE1-210ENST00000601662 BICDL1Q6ZP65 573 aa18.62■□□□□ 0.57
USE1-210ENST00000601662 BCL2L12Q9HB09 334 aa18.62■□□□□ 0.57
USE1-210ENST00000601662 WWC3Q9ULE0 1092 aa18.62■□□□□ 0.57
USE1-210ENST00000601662 CD2APQ9Y5K6 639 aa18.62■□□□□ 0.57
USE1-210ENST00000601662 NBPF26B4DH59 902 aa18.61■□□□□ 0.57
USE1-210ENST00000601662 EIF2S2P20042 333 aaKnown RBP18.61■□□□□ 0.57
USE1-210ENST00000601662 DDR1Q08345 913 aa18.61■□□□□ 0.57
USE1-210ENST00000601662 GPR162Q16538 588 aa18.61■□□□□ 0.57
USE1-210ENST00000601662 NBPF10Q6P3W6 841 aaKnown RBP18.61■□□□□ 0.57
USE1-210ENST00000601662 NBPF15Q8N660 670 aa18.61■□□□□ 0.57
USE1-210ENST00000601662 CHMP4AQ9BY43 222 aa18.61■□□□□ 0.57
USE1-210ENST00000601662 KDM3BQ7LBC6 1761 aa18.6■□□□□ 0.57
USE1-210ENST00000601662 NFIXQ14938 502 aa18.6■□□□□ 0.57
USE1-210ENST00000601662 DZIP3Q86Y13 1208 aaKnown RBP18.6■□□□□ 0.57
USE1-210ENST00000601662 TM4SF1P30408 202 aa18.59■□□□□ 0.57
USE1-210ENST00000601662 EXOSC9Q06265 439 aaKnown RBP18.59■□□□□ 0.57
USE1-210ENST00000601662 KRT24Q2M2I5 525 aa18.59■□□□□ 0.57
USE1-210ENST00000601662 NECTIN2Q92692 538 aa18.59■□□□□ 0.57
USE1-210ENST00000601662 ZNF428Q96B54 188 aa18.59■□□□□ 0.57
USE1-210ENST00000601662 MYL6BP14649 208 aa18.58■□□□□ 0.56
USE1-210ENST00000601662 POLRMTO00411 1230 aaKnown RBP18.57■□□□□ 0.56
USE1-210ENST00000601662 TBC1D9BQ66K14 1250 aa18.57■□□□□ 0.56
USE1-210ENST00000601662 CAMTA2O94983 1202 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms