RNA–Protein interactions for RNA: ENST00000601141.5

SIN3B-211, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 1,473 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-211ENST00000601141 E9PSI1 815 aa26.62■■□□□ 1.85
SIN3B-211ENST00000601141 GNPATO15228 680 aa26.62■■□□□ 1.85
SIN3B-211ENST00000601141 R3HDM1Q15032 1099 aaKnown RBP26.61■■□□□ 1.85
SIN3B-211ENST00000601141 RC3H1Q5TC82 1133 aaKnown RBP26.61■■□□□ 1.85
SIN3B-211ENST00000601141 CCDC87Q9NVE4 849 aa26.61■■□□□ 1.85
SIN3B-211ENST00000601141 CDCA7LQ96GN5 454 aa26.6■■□□□ 1.85
SIN3B-211ENST00000601141 LAMB4A4D0S4 1761 aa26.59■■□□□ 1.85
SIN3B-211ENST00000601141 ZBED9Q6R2W3 1325 aa26.59■■□□□ 1.85
SIN3B-211ENST00000601141 ELL2O00472 640 aaPredicted RBP26.59■■□□□ 1.85
SIN3B-211ENST00000601141 DUSP27Q5VZP5 1158 aa26.59■■□□□ 1.85
SIN3B-211ENST00000601141 PSDA5PKW4 1024 aaPredicted RBP26.58■■□□□ 1.85
SIN3B-211ENST00000601141 PHF14O94880 888 aa26.58■■□□□ 1.85
SIN3B-211ENST00000601141 EIF2S2P20042 333 aaKnown RBP26.58■■□□□ 1.85
SIN3B-211ENST00000601141 INTS5Q6P9B9 1019 aaKnown RBP26.58■■□□□ 1.85
SIN3B-211ENST00000601141 C8orf58Q8NAV2 365 aa26.58■■□□□ 1.85
SIN3B-211ENST00000601141 ZBTB1Q9Y2K1 713 aa26.58■■□□□ 1.85
SIN3B-211ENST00000601141 A1BGP04217 495 aa26.57■■□□□ 1.84
SIN3B-211ENST00000601141 SLFN5Q08AF3 891 aa26.57■■□□□ 1.84
SIN3B-211ENST00000601141 RTCBQ9Y3I0 505 aaKnown RBP26.57■■□□□ 1.84
SIN3B-211ENST00000601141 CANXP27824 592 aaKnown RBP26.56■■□□□ 1.84
SIN3B-211ENST00000601141 YTHDC1Q96MU7 727 aaKnown RBP26.56■■□□□ 1.84
SIN3B-211ENST00000601141 MYH14Q7Z406 1995 aaKnown RBP26.56■■□□□ 1.84
SIN3B-211ENST00000601141 HOXB7P09629 217 aa26.55■■□□□ 1.84
SIN3B-211ENST00000601141 SMIM5Q71RC9 77 aa26.55■■□□□ 1.84
SIN3B-211ENST00000601141 NECTIN2Q92692 538 aa26.55■■□□□ 1.84
SIN3B-211ENST00000601141 TUBGCP6Q96RT7 1819 aa26.55■■□□□ 1.84
SIN3B-211ENST00000601141 RPS6KA4O75676 772 aa26.55■■□□□ 1.84
SIN3B-211ENST00000601141 PIP4K2AP48426 406 aaPredicted RBP26.55■■□□□ 1.84
SIN3B-211ENST00000601141 EXOSC9Q06265 439 aaKnown RBP26.55■■□□□ 1.84
SIN3B-211ENST00000601141 AMIGO3Q86WK7 504 aa26.55■■□□□ 1.84
SIN3B-211ENST00000601141 TSPYL6Q8N831 410 aa26.55■■□□□ 1.84
SIN3B-211ENST00000601141 UBR3Q6ZT12 1888 aa26.54■■□□□ 1.84
SIN3B-211ENST00000601141 HDGFL1Q5TGJ6 251 aa26.54■■□□□ 1.84
SIN3B-211ENST00000601141 ZNF330Q9Y3S2 320 aaPredicted RBP26.54■■□□□ 1.84
SIN3B-211ENST00000601141 PNPLA7Q6ZV29 1317 aa26.53■■□□□ 1.84
SIN3B-211ENST00000601141 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.53■■□□□ 1.84
SIN3B-211ENST00000601141 MSH5O43196 834 aa26.53■■□□□ 1.84
SIN3B-211ENST00000601141 SSFA2P28290 1259 aa26.53■■□□□ 1.84
SIN3B-211ENST00000601141 TWISTNBQ3B726 338 aaPredicted RBP26.53■■□□□ 1.84
SIN3B-211ENST00000601141 NPM2Q86SE8 214 aaKnown RBP26.51■■□□□ 1.83
SIN3B-211ENST00000601141 FLAD1Q8NFF5 587 aa26.51■■□□□ 1.83
SIN3B-211ENST00000601141 SOS1Q07889 1333 aaPredicted RBP26.51■■□□□ 1.83
SIN3B-211ENST00000601141 TRAPPC3LQ5T215 181 aa26.5■■□□□ 1.83
SIN3B-211ENST00000601141 QSER1Q2KHR3 1735 aa26.5■■□□□ 1.83
SIN3B-211ENST00000601141 COL23A1Q86Y22 540 aaPredicted RBP26.49■■□□□ 1.83
SIN3B-211ENST00000601141 COL15A1P39059 1388 aa26.49■■□□□ 1.83
SIN3B-211ENST00000601141 NBPF26B4DH59 902 aa26.49■■□□□ 1.83
SIN3B-211ENST00000601141 MYL6BP14649 208 aa26.49■■□□□ 1.83
SIN3B-211ENST00000601141 ADRA2BP18089 450 aa26.49■■□□□ 1.83
SIN3B-211ENST00000601141 IL6STP40189 918 aaPredicted RBP26.49■■□□□ 1.83
SIN3B-211ENST00000601141 NBPF10Q6P3W6 841 aaKnown RBP26.49■■□□□ 1.83
SIN3B-211ENST00000601141 TRMT2AQ8IZ69 625 aaKnown RBP26.49■■□□□ 1.83
SIN3B-211ENST00000601141 NBPF15Q8N660 670 aa26.49■■□□□ 1.83
SIN3B-211ENST00000601141 PDGFDQ9GZP0 370 aaPredicted RBP26.49■■□□□ 1.83
SIN3B-211ENST00000601141 ERBB4Q15303 1308 aa26.48■■□□□ 1.83
SIN3B-211ENST00000601141 ARHGEF1Q92888 912 aaKnown RBP26.48■■□□□ 1.83
SIN3B-211ENST00000601141 EIF5P55010 431 aaKnown RBP26.47■■□□□ 1.83
SIN3B-211ENST00000601141 CHMP4AQ9BY43 222 aa26.47■■□□□ 1.83
SIN3B-211ENST00000601141 CHPF2Q9P2E5 772 aa26.47■■□□□ 1.83
SIN3B-211ENST00000601141 RFC4P35249 363 aa26.46■■□□□ 1.83
SIN3B-211ENST00000601141 CCDC30Q5VVM6 783 aa26.46■■□□□ 1.83
SIN3B-211ENST00000601141 ARXQ96QS3 562 aa26.46■■□□□ 1.83
SIN3B-211ENST00000601141 ANXA1P04083 346 aa26.45■■□□□ 1.82
SIN3B-211ENST00000601141 VAMP4O75379 141 aa26.44■■□□□ 1.82
SIN3B-211ENST00000601141 PROSER3Q2NL68 480 aa26.44■■□□□ 1.82
SIN3B-211ENST00000601141 DBF4Q9UBU7 674 aaPredicted RBP26.44■■□□□ 1.82
SIN3B-211ENST00000601141 A0A087WZG4 1122 aa26.43■■□□□ 1.82
SIN3B-211ENST00000601141 PDIA6Q15084 440 aa26.43■■□□□ 1.82
SIN3B-211ENST00000601141 DDX21Q9NR30 783 aaKnown RBP eCLIP26.43■■□□□ 1.82
SIN3B-211ENST00000601141 CASZ1Q86V15 1759 aa26.43■■□□□ 1.82
SIN3B-211ENST00000601141 C4AP0C0L4 1744 aa26.43■■□□□ 1.82
SIN3B-211ENST00000601141 TCERG1O14776 1098 aaKnown RBP26.42■■□□□ 1.82
SIN3B-211ENST00000601141 STK31Q9BXU1 1019 aa26.42■■□□□ 1.82
SIN3B-211ENST00000601141 ZPR1O75312 459 aa26.41■■□□□ 1.82
SIN3B-211ENST00000601141 DZIP3Q86Y13 1208 aaKnown RBP26.41■■□□□ 1.82
SIN3B-211ENST00000601141 SRP68Q9UHB9 627 aaKnown RBP26.41■■□□□ 1.82
SIN3B-211ENST00000601141 TBC1D2BQ9UPU7 963 aa26.41■■□□□ 1.82
SIN3B-211ENST00000601141 ZBTB7AO95365 584 aa26.4■■□□□ 1.82
SIN3B-211ENST00000601141 USP42Q9H9J4 1324 aaKnown RBP26.39■■□□□ 1.82
SIN3B-211ENST00000601141 SLC16A10Q8TF71 515 aa26.39■■□□□ 1.82
SIN3B-211ENST00000601141 USPL1Q5W0Q7 1092 aa26.38■■□□□ 1.81
SIN3B-211ENST00000601141 LRP10Q7Z4F1 713 aa26.38■■□□□ 1.81
SIN3B-211ENST00000601141 HYPKQ9NX55 129 aa26.38■■□□□ 1.81
SIN3B-211ENST00000601141 NARFQ9UHQ1 456 aa26.38■■□□□ 1.81
SIN3B-211ENST00000601141 AIMP1Q12904 312 aaKnown RBP26.37■■□□□ 1.81
SIN3B-211ENST00000601141 MSL1Q68DK7 614 aa26.37■■□□□ 1.81
SIN3B-211ENST00000601141 KIF6Q6ZMV9 814 aa26.36■■□□□ 1.81
SIN3B-211ENST00000601141 XAGE3Q8WTP9 111 aa26.36■■□□□ 1.81
SIN3B-211ENST00000601141 SLC4A2P04920 1241 aa26.36■■□□□ 1.81
SIN3B-211ENST00000601141 TTLL7Q6ZT98 887 aa26.36■■□□□ 1.81
SIN3B-211ENST00000601141 COPS6Q7L5N1 327 aa26.36■■□□□ 1.81
SIN3B-211ENST00000601141 MTFR1LQ9H019 292 aa26.36■■□□□ 1.81
SIN3B-211ENST00000601141 CT47B1P0C2W7 299 aaPredicted RBP26.35■■□□□ 1.81
SIN3B-211ENST00000601141 GYS1P13807 737 aa26.35■■□□□ 1.81
SIN3B-211ENST00000601141 ATF5Q9Y2D1 282 aaPredicted RBP26.35■■□□□ 1.81
SIN3B-211ENST00000601141 CAMTA2O94983 1202 aa26.34■■□□□ 1.81
SIN3B-211ENST00000601141 PHAXQ9H814 394 aaKnown RBP26.34■■□□□ 1.81
SIN3B-211ENST00000601141 SCN7AQ01118 1682 aa26.33■■□□□ 1.8
SIN3B-211ENST00000601141 ZNF428Q96B54 188 aa26.32■■□□□ 1.8
SIN3B-211ENST00000601141 ZBTB3Q9H5J0 574 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms