RNA–Protein interactions for RNA: ENST00000600816.1

TMEM143-211, Transcript of transmembrane protein 143, humanhuman

TSL 2

Gene TMEM143, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-211ENST00000600816 SIPA1L3O60292 1781 aaPredicted RBP21.46■■□□□ 1.03
TMEM143-211ENST00000600816 PRAMEF22A3QJZ6 481 aa21.45■■□□□ 1.02
TMEM143-211ENST00000600816 STARD3NLO95772 234 aa21.45■■□□□ 1.02
TMEM143-211ENST00000600816 YBX3P16989 372 aaKnown RBP eCLIP21.44■■□□□ 1.02
TMEM143-211ENST00000600816 YY1P25490 414 aa21.44■■□□□ 1.02
TMEM143-211ENST00000600816 USPL1Q5W0Q7 1092 aa21.44■■□□□ 1.02
TMEM143-211ENST00000600816 PNNQ9H307 717 aaKnown RBP21.44■■□□□ 1.02
TMEM143-211ENST00000600816 TAF7Q15545 349 aaPredicted RBP21.43■■□□□ 1.02
TMEM143-211ENST00000600816 CCDC146Q8IYE0 955 aa21.43■■□□□ 1.02
TMEM143-211ENST00000600816 WWC3Q9ULE0 1092 aa21.43■■□□□ 1.02
TMEM143-211ENST00000600816 COL15A1P39059 1388 aa21.43■■□□□ 1.02
TMEM143-211ENST00000600816 C4AP0C0L4 1744 aa21.43■■□□□ 1.02
TMEM143-211ENST00000600816 UTRNP46939 3433 aa21.42■■□□□ 1.02
TMEM143-211ENST00000600816 A1BGP04217 495 aa21.42■■□□□ 1.02
TMEM143-211ENST00000600816 ZPR1O75312 459 aa21.41■■□□□ 1.02
TMEM143-211ENST00000600816 DDR1Q08345 913 aa21.41■■□□□ 1.02
TMEM143-211ENST00000600816 TEX13AQ9BXU3 409 aaPredicted RBP21.41■■□□□ 1.02
TMEM143-211ENST00000600816 USP16Q9Y5T5 823 aa21.41■■□□□ 1.02
TMEM143-211ENST00000600816 ZNF316A6NFI3 1004 aaPredicted RBP21.4■■□□□ 1.02
TMEM143-211ENST00000600816 EIF5P55010 431 aaKnown RBP21.4■■□□□ 1.02
TMEM143-211ENST00000600816 BCL2L12Q9HB09 334 aa21.4■■□□□ 1.02
TMEM143-211ENST00000600816 NARFQ9UHQ1 456 aa21.4■■□□□ 1.02
TMEM143-211ENST00000600816 RRP7AQ9Y3A4 280 aaKnown RBP21.4■■□□□ 1.02
TMEM143-211ENST00000600816 ZNF330Q9Y3S2 320 aaPredicted RBP21.4■■□□□ 1.02
TMEM143-211ENST00000600816 PARP3Q9Y6F1 533 aa21.4■■□□□ 1.02
TMEM143-211ENST00000600816 PIP4K2AP48426 406 aaPredicted RBP21.39■■□□□ 1.01
TMEM143-211ENST00000600816 RIPK4P57078 832 aa21.39■■□□□ 1.01
TMEM143-211ENST00000600816 WDR43Q15061 677 aaKnown RBP eCLIP21.39■■□□□ 1.01
TMEM143-211ENST00000600816 ADAMTS8Q9UP79 889 aa21.39■■□□□ 1.01
TMEM143-211ENST00000600816 GOLGB1Q14789 3259 aaKnown RBP21.39■■□□□ 1.01
TMEM143-211ENST00000600816 TMPOP42166 694 aaKnown RBP21.38■■□□□ 1.01
TMEM143-211ENST00000600816 SNRPA1P09661 255 aaKnown RBP21.37■■□□□ 1.01
TMEM143-211ENST00000600816 TM4SF1P30408 202 aa21.37■■□□□ 1.01
TMEM143-211ENST00000600816 C10orf71Q711Q0 1435 aa21.37■■□□□ 1.01
TMEM143-211ENST00000600816 POLRMTO00411 1230 aaKnown RBP21.36■■□□□ 1.01
TMEM143-211ENST00000600816 NFIXQ14938 502 aa21.36■■□□□ 1.01
TMEM143-211ENST00000600816 TBC1D2BQ9UPU7 963 aa21.36■■□□□ 1.01
TMEM143-211ENST00000600816 A0A0G2JLW4 131 aa21.35■■□□□ 1.01
TMEM143-211ENST00000600816 IL6STP40189 918 aaPredicted RBP21.35■■□□□ 1.01
TMEM143-211ENST00000600816 NEUROD2Q15784 382 aa21.35■■□□□ 1.01
TMEM143-211ENST00000600816 PXDNLA1KZ92 1463 aa21.34■■□□□ 1.01
TMEM143-211ENST00000600816 CCDC184Q52MB2 194 aa21.34■■□□□ 1.01
TMEM143-211ENST00000600816 PNISRQ8TF01 805 aaKnown RBP21.34■■□□□ 1.01
TMEM143-211ENST00000600816 RUNDC1Q96C34 613 aa21.34■■□□□ 1.01
TMEM143-211ENST00000600816 A0A087WZG4 1122 aa21.33■■□□□ 1.01
TMEM143-211ENST00000600816 EIF4A1P60842 406 aaKnown RBP21.33■■□□□ 1.01
TMEM143-211ENST00000600816 DLG5Q8TDM6 1919 aa21.32■■□□□ 1
TMEM143-211ENST00000600816 NBPF26B4DH59 902 aa21.32■■□□□ 1
TMEM143-211ENST00000600816 DPEP1P16444 411 aa21.32■■□□□ 1
TMEM143-211ENST00000600816 TGFB2P61812 414 aa21.32■■□□□ 1
TMEM143-211ENST00000600816 NBPF10Q6P3W6 841 aaKnown RBP21.32■■□□□ 1
TMEM143-211ENST00000600816 BICDL1Q6ZP65 573 aa21.32■■□□□ 1
TMEM143-211ENST00000600816 NBPF15Q8N660 670 aa21.32■■□□□ 1
TMEM143-211ENST00000600816 GRIN3BO60391 1043 aa21.31■■□□□ 1
TMEM143-211ENST00000600816 TBC1D9BQ66K14 1250 aa21.31■■□□□ 1
TMEM143-211ENST00000600816 GIGYF1O75420 1035 aaPredicted RBP21.3■■□□□ 1
TMEM143-211ENST00000600816 CAMTA2O94983 1202 aa21.3■■□□□ 1
TMEM143-211ENST00000600816 TSPYL4Q9UJ04 414 aa21.3■■□□□ 1
TMEM143-211ENST00000600816 TRIM35Q9UPQ4 493 aa21.3■■□□□ 1
TMEM143-211ENST00000600816 KCNA3P22001 575 aa21.29■■□□□ 1
TMEM143-211ENST00000600816 LMOD3Q0VAK6 560 aa21.29■■□□□ 1
TMEM143-211ENST00000600816 DZIP3Q86Y13 1208 aaKnown RBP21.29■■□□□ 1
TMEM143-211ENST00000600816 SERPINB2P05120 415 aa21.28■■□□□ 1
TMEM143-211ENST00000600816 NPM2Q86SE8 214 aaKnown RBP21.28■■□□□ 1
TMEM143-211ENST00000600816 CHRNA5P30532 468 aa21.27■■□□□ 1
TMEM143-211ENST00000600816 KIAA1551Q9HCM1 1747 aa21.26■□□□□ 0.99
TMEM143-211ENST00000600816 BCS1LQ9Y276 419 aa21.26■□□□□ 0.99
TMEM143-211ENST00000600816 KDM3BQ7LBC6 1761 aa21.25■□□□□ 0.99
TMEM143-211ENST00000600816 KIF13BQ9NQT8 1826 aa21.25■□□□□ 0.99
TMEM143-211ENST00000600816 NGEFQ8N5V2 710 aa21.25■□□□□ 0.99
TMEM143-211ENST00000600816 ZNF784Q8NCA9 323 aaPredicted RBP21.25■□□□□ 0.99
TMEM143-211ENST00000600816 CARMIL3Q8ND23 1372 aa21.24■□□□□ 0.99
TMEM143-211ENST00000600816 APAF1O14727 1248 aa21.24■□□□□ 0.99
TMEM143-211ENST00000600816 CCDC24Q8N4L8 307 aa21.24■□□□□ 0.99
TMEM143-211ENST00000600816 LAS1LQ9Y4W2 734 aaKnown RBP21.24■□□□□ 0.99
TMEM143-211ENST00000600816 SCN7AQ01118 1682 aa21.23■□□□□ 0.99
TMEM143-211ENST00000600816 N4BP2Q86UW6 1770 aaPredicted RBP21.23■□□□□ 0.99
TMEM143-211ENST00000600816 SENP3-EIF4A1A0A087X0R7 540 aa21.22■□□□□ 0.99
TMEM143-211ENST00000600816 ANP32CO43423 234 aa21.22■□□□□ 0.99
TMEM143-211ENST00000600816 KRT24Q2M2I5 525 aa21.22■□□□□ 0.99
TMEM143-211ENST00000600816 CHL1O00533 1208 aa21.21■□□□□ 0.99
TMEM143-211ENST00000600816 MYL6BP14649 208 aa21.21■□□□□ 0.99
TMEM143-211ENST00000600816 SETDB2Q96T68 719 aa21.21■□□□□ 0.99
TMEM143-211ENST00000600816 BABAM1Q9NWV8 329 aa21.21■□□□□ 0.99
TMEM143-211ENST00000600816 HLFQ16534 295 aa21.2■□□□□ 0.98
TMEM143-211ENST00000600816 PRR5LQ6MZQ0 368 aa21.2■□□□□ 0.98
TMEM143-211ENST00000600816 PIM2Q9P1W9 311 aa21.2■□□□□ 0.98
TMEM143-211ENST00000600816 EIF2S2P20042 333 aaKnown RBP21.19■□□□□ 0.98
TMEM143-211ENST00000600816 TTLL7Q6ZT98 887 aa21.19■□□□□ 0.98
TMEM143-211ENST00000600816 NRXN2Q9P2S2 1712 aa21.18■□□□□ 0.98
TMEM143-211ENST00000600816 CLEC4GQ6UXB4 293 aa21.18■□□□□ 0.98
TMEM143-211ENST00000600816 NECTIN2Q92692 538 aa21.18■□□□□ 0.98
TMEM143-211ENST00000600816 MRS2Q9HD23 443 aa21.18■□□□□ 0.98
TMEM143-211ENST00000600816 LAMB4A4D0S4 1761 aa21.18■□□□□ 0.98
TMEM143-211ENST00000600816 ANXA1P04083 346 aa21.17■□□□□ 0.98
TMEM143-211ENST00000600816 PDIA6Q15084 440 aa21.17■□□□□ 0.98
TMEM143-211ENST00000600816 PROSER3Q2NL68 480 aa21.17■□□□□ 0.98
TMEM143-211ENST00000600816 DALRD3Q5D0E6 543 aaKnown RBP21.17■□□□□ 0.98
TMEM143-211ENST00000600816 ARHGAP27Q6ZUM4 889 aa21.17■□□□□ 0.98
TMEM143-211ENST00000600816 C2CD5Q86YS7 1000 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms