RNA–Protein interactions for RNA: ENST00000600475.1

SHD-205, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 3

Gene SHD, Length 379 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-205ENST00000600475 DUSP27Q5VZP5 1158 aa13.15□□□□□ -0.3
SHD-205ENST00000600475 INTS5Q6P9B9 1019 aaKnown RBP13.15□□□□□ -0.3
SHD-205ENST00000600475 C8orf58Q8NAV2 365 aa13.15□□□□□ -0.3
SHD-205ENST00000600475 C5P01031 1676 aa13.15□□□□□ -0.31
SHD-205ENST00000600475 SOS1Q07889 1333 aaPredicted RBP13.14□□□□□ -0.31
SHD-205ENST00000600475 COL5A3P25940 1745 aaPredicted RBP13.14□□□□□ -0.31
SHD-205ENST00000600475 SLC15A2Q16348 729 aa13.14□□□□□ -0.31
SHD-205ENST00000600475 NBPF14Q5TI25 921 aa13.14□□□□□ -0.31
SHD-205ENST00000600475 TSPYL6Q8N831 410 aa13.14□□□□□ -0.31
SHD-205ENST00000600475 CCDC87Q9NVE4 849 aa13.14□□□□□ -0.31
SHD-205ENST00000600475 STK32BQ9NY57 414 aa13.14□□□□□ -0.31
SHD-205ENST00000600475 C4BP0C0L5 1744 aa13.13□□□□□ -0.31
SHD-205ENST00000600475 RPS6KA4O75676 772 aa13.13□□□□□ -0.31
SHD-205ENST00000600475 A1BGP04217 495 aa13.13□□□□□ -0.31
SHD-205ENST00000600475 EXOSC9Q06265 439 aaKnown RBP13.12□□□□□ -0.31
SHD-205ENST00000600475 AMIGO3Q86WK7 504 aa13.12□□□□□ -0.31
SHD-205ENST00000600475 AK7Q96M32 723 aa13.12□□□□□ -0.31
SHD-205ENST00000600475 ZBTB1Q9Y2K1 713 aa13.12□□□□□ -0.31
SHD-205ENST00000600475 ERBB4Q15303 1308 aa13.12□□□□□ -0.31
SHD-205ENST00000600475 NBPF26B4DH59 902 aa13.11□□□□□ -0.31
SHD-205ENST00000600475 ELL2O00472 640 aaPredicted RBP13.11□□□□□ -0.31
SHD-205ENST00000600475 VAMP4O75379 141 aa13.11□□□□□ -0.31
SHD-205ENST00000600475 EIF5P55010 431 aaKnown RBP13.11□□□□□ -0.31
SHD-205ENST00000600475 TWISTNBQ3B726 338 aaPredicted RBP13.11□□□□□ -0.31
SHD-205ENST00000600475 NBPF10Q6P3W6 841 aaKnown RBP13.11□□□□□ -0.31
SHD-205ENST00000600475 NBPF15Q8N660 670 aa13.11□□□□□ -0.31
SHD-205ENST00000600475 TFCP2L1Q9NZI6 479 aa13.11□□□□□ -0.31
SHD-205ENST00000600475 GNPATO15228 680 aa13.1□□□□□ -0.31
SHD-205ENST00000600475 EIF2S2P20042 333 aaKnown RBP13.1□□□□□ -0.31
SHD-205ENST00000600475 SSFA2P28290 1259 aa13.1□□□□□ -0.31
SHD-205ENST00000600475 IL6STP40189 918 aaPredicted RBP13.1□□□□□ -0.31
SHD-205ENST00000600475 PDIA6Q15084 440 aa13.1□□□□□ -0.31
SHD-205ENST00000600475 HDGFL1Q5TGJ6 251 aa13.1□□□□□ -0.31
SHD-205ENST00000600475 CHMP4AQ9BY43 222 aa13.1□□□□□ -0.31
SHD-205ENST00000600475 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
SHD-205ENST00000600475 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.09□□□□□ -0.31
SHD-205ENST00000600475 ADRA2BP18089 450 aa13.09□□□□□ -0.31
SHD-205ENST00000600475 CANXP27824 592 aaKnown RBP13.09□□□□□ -0.31
SHD-205ENST00000600475 UBR3Q6ZT12 1888 aa13.09□□□□□ -0.31
SHD-205ENST00000600475 LRP10Q7Z4F1 713 aa13.09□□□□□ -0.31
SHD-205ENST00000600475 FLAD1Q8NFF5 587 aa13.09□□□□□ -0.31
SHD-205ENST00000600475 LAMB4A4D0S4 1761 aa13.09□□□□□ -0.31
SHD-205ENST00000600475 PNPLA7Q6ZV29 1317 aa13.09□□□□□ -0.31
SHD-205ENST00000600475 R3HDM1Q15032 1099 aaKnown RBP13.08□□□□□ -0.32
SHD-205ENST00000600475 TRAPPC3LQ5T215 181 aa13.08□□□□□ -0.32
SHD-205ENST00000600475 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
SHD-205ENST00000600475 COL23A1Q86Y22 540 aaPredicted RBP13.08□□□□□ -0.32
SHD-205ENST00000600475 DDX21Q9NR30 783 aaKnown RBP eCLIP13.08□□□□□ -0.32
SHD-205ENST00000600475 CT47B1P0C2W7 299 aaPredicted RBP13.07□□□□□ -0.32
SHD-205ENST00000600475 PIP4K2AP48426 406 aaPredicted RBP13.07□□□□□ -0.32
SHD-205ENST00000600475 PROSER3Q2NL68 480 aa13.07□□□□□ -0.32
SHD-205ENST00000600475 CCDC30Q5VVM6 783 aa13.07□□□□□ -0.32
SHD-205ENST00000600475 NECTIN2Q92692 538 aa13.07□□□□□ -0.32
SHD-205ENST00000600475 ARHGEF1Q92888 912 aaKnown RBP13.07□□□□□ -0.32
SHD-205ENST00000600475 ZNF428Q96B54 188 aa13.07□□□□□ -0.32
SHD-205ENST00000600475 YTHDC1Q96MU7 727 aaKnown RBP13.07□□□□□ -0.32
SHD-205ENST00000600475 CHPF2Q9P2E5 772 aa13.07□□□□□ -0.32
SHD-205ENST00000600475 DBF4Q9UBU7 674 aaPredicted RBP13.07□□□□□ -0.32
SHD-205ENST00000600475 QSER1Q2KHR3 1735 aa13.07□□□□□ -0.32
SHD-205ENST00000600475 TUBGCP6Q96RT7 1819 aa13.06□□□□□ -0.32
SHD-205ENST00000600475 PDGFDQ9GZP0 370 aaPredicted RBP13.06□□□□□ -0.32
SHD-205ENST00000600475 COL15A1P39059 1388 aa13.06□□□□□ -0.32
SHD-205ENST00000600475 A0A087WZG4 1122 aa13.05□□□□□ -0.32
SHD-205ENST00000600475 PSDA5PKW4 1024 aaPredicted RBP13.05□□□□□ -0.32
SHD-205ENST00000600475 PHF14O94880 888 aa13.05□□□□□ -0.32
SHD-205ENST00000600475 ANXA1P04083 346 aa13.05□□□□□ -0.32
SHD-205ENST00000600475 SLC16A10Q8TF71 515 aa13.05□□□□□ -0.32
SHD-205ENST00000600475 HYPKQ9NX55 129 aa13.05□□□□□ -0.32
SHD-205ENST00000600475 MYL6BP14649 208 aa13.04□□□□□ -0.32
SHD-205ENST00000600475 RFC4P35249 363 aa13.04□□□□□ -0.32
SHD-205ENST00000600475 NARFQ9UHQ1 456 aa13.04□□□□□ -0.32
SHD-205ENST00000600475 TCERG1O14776 1098 aaKnown RBP13.03□□□□□ -0.32
SHD-205ENST00000600475 RGL2O15211 777 aa13.03□□□□□ -0.32
SHD-205ENST00000600475 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
SHD-205ENST00000600475 NPM2Q86SE8 214 aaKnown RBP13.03□□□□□ -0.32
SHD-205ENST00000600475 STK31Q9BXU1 1019 aa13.03□□□□□ -0.32
SHD-205ENST00000600475 TBC1D2BQ9UPU7 963 aa13.03□□□□□ -0.32
SHD-205ENST00000600475 ZNF330Q9Y3S2 320 aaPredicted RBP13.03□□□□□ -0.32
SHD-205ENST00000600475 USP42Q9H9J4 1324 aaKnown RBP13.03□□□□□ -0.32
SHD-205ENST00000600475 CACNA1FO60840 1977 aa13.02□□□□□ -0.32
SHD-205ENST00000600475 CAMTA2O94983 1202 aa13.02□□□□□ -0.33
SHD-205ENST00000600475 GYS1P13807 737 aa13.02□□□□□ -0.33
SHD-205ENST00000600475 ALDH1L2Q3SY69 923 aa13.02□□□□□ -0.33
SHD-205ENST00000600475 TTLL7Q6ZT98 887 aa13.02□□□□□ -0.33
SHD-205ENST00000600475 COPS6Q7L5N1 327 aa13.02□□□□□ -0.33
SHD-205ENST00000600475 DZIP3Q86Y13 1208 aaKnown RBP13.02□□□□□ -0.33
SHD-205ENST00000600475 XAGE3Q8WTP9 111 aa13.02□□□□□ -0.33
SHD-205ENST00000600475 SSH1Q8WYL5 1049 aa13.02□□□□□ -0.33
SHD-205ENST00000600475 BCL2L12Q9HB09 334 aa13.02□□□□□ -0.33
SHD-205ENST00000600475 SRP68Q9UHB9 627 aaKnown RBP13.02□□□□□ -0.33
SHD-205ENST00000600475 CASZ1Q86V15 1759 aa13.02□□□□□ -0.33
SHD-205ENST00000600475 ERVV-1B6SEH8 477 aa13.01□□□□□ -0.33
SHD-205ENST00000600475 MSH5O43196 834 aa13.01□□□□□ -0.33
SHD-205ENST00000600475 ZPR1O75312 459 aa13.01□□□□□ -0.33
SHD-205ENST00000600475 RARSP54136 660 aaKnown RBP13.01□□□□□ -0.33
SHD-205ENST00000600475 G2E3Q7L622 706 aa13.01□□□□□ -0.33
SHD-205ENST00000600475 PHAXQ9H814 394 aaKnown RBP13.01□□□□□ -0.33
SHD-205ENST00000600475 C4AP0C0L4 1744 aa13□□□□□ -0.33
SHD-205ENST00000600475 MAP3K15Q6ZN16 1313 aa13□□□□□ -0.33
SHD-205ENST00000600475 BRPF1P55201 1214 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms