RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 C5P01031 1676 aa16.33■□□□□ 0.2
CHMP2A-206ENST00000600118 RC3H1Q5TC82 1133 aaKnown RBP16.32■□□□□ 0.2
CHMP2A-206ENST00000600118 HDGFL1Q5TGJ6 251 aa16.32■□□□□ 0.2
CHMP2A-206ENST00000600118 INTS5Q6P9B9 1019 aaKnown RBP16.32■□□□□ 0.2
CHMP2A-206ENST00000600118 RREB1Q92766 1687 aa16.31■□□□□ 0.2
CHMP2A-206ENST00000600118 ERBB4Q15303 1308 aa16.31■□□□□ 0.2
CHMP2A-206ENST00000600118 CRKLP46109 303 aaKnown RBP16.31■□□□□ 0.2
CHMP2A-206ENST00000600118 ZNF428Q96B54 188 aa16.31■□□□□ 0.2
CHMP2A-206ENST00000600118 COL5A3P25940 1745 aaPredicted RBP16.31■□□□□ 0.2
CHMP2A-206ENST00000600118 NBPF26B4DH59 902 aa16.3■□□□□ 0.2
CHMP2A-206ENST00000600118 A1BGP04217 495 aa16.3■□□□□ 0.2
CHMP2A-206ENST00000600118 EIF2S2P20042 333 aaKnown RBP16.3■□□□□ 0.2
CHMP2A-206ENST00000600118 PDIA6Q15084 440 aa16.3■□□□□ 0.2
CHMP2A-206ENST00000600118 NBPF14Q5TI25 921 aa16.3■□□□□ 0.2
CHMP2A-206ENST00000600118 NBPF10Q6P3W6 841 aaKnown RBP16.3■□□□□ 0.2
CHMP2A-206ENST00000600118 NBPF15Q8N660 670 aa16.3■□□□□ 0.2
CHMP2A-206ENST00000600118 CHMP4AQ9BY43 222 aa16.3■□□□□ 0.2
CHMP2A-206ENST00000600118 CCDC87Q9NVE4 849 aa16.3■□□□□ 0.2
CHMP2A-206ENST00000600118 ZBTB1Q9Y2K1 713 aa16.3■□□□□ 0.2
CHMP2A-206ENST00000600118 LAMB4A4D0S4 1761 aa16.3■□□□□ 0.2
CHMP2A-206ENST00000600118 CCDC30Q5VVM6 783 aa16.29■□□□□ 0.2
CHMP2A-206ENST00000600118 LRP10Q7Z4F1 713 aa16.29■□□□□ 0.2
CHMP2A-206ENST00000600118 AKT1S1Q96B36 256 aa16.29■□□□□ 0.2
CHMP2A-206ENST00000600118 C4BP0C0L5 1744 aa16.28■□□□□ 0.2
CHMP2A-206ENST00000600118 ZNF827Q17R98 1081 aa16.28■□□□□ 0.2
CHMP2A-206ENST00000600118 NECTIN2Q92692 538 aa16.28■□□□□ 0.2
CHMP2A-206ENST00000600118 CHPF2Q9P2E5 772 aa16.28■□□□□ 0.2
CHMP2A-206ENST00000600118 TAF1LQ8IZX4 1826 aa16.27■□□□□ 0.2
CHMP2A-206ENST00000600118 RPS6KA4O75676 772 aa16.27■□□□□ 0.2
CHMP2A-206ENST00000600118 RARSP54136 660 aaKnown RBP16.27■□□□□ 0.2
CHMP2A-206ENST00000600118 PROSER3Q2NL68 480 aa16.27■□□□□ 0.2
CHMP2A-206ENST00000600118 SSH1Q8WYL5 1049 aa16.27■□□□□ 0.2
CHMP2A-206ENST00000600118 ANO8Q9HCE9 1232 aaPredicted RBP16.27■□□□□ 0.2
CHMP2A-206ENST00000600118 DDX21Q9NR30 783 aaKnown RBP eCLIP16.27■□□□□ 0.2
CHMP2A-206ENST00000600118 DBF4Q9UBU7 674 aaPredicted RBP16.27■□□□□ 0.2
CHMP2A-206ENST00000600118 NUP188Q5SRE5 1749 aa16.26■□□□□ 0.19
CHMP2A-206ENST00000600118 IL6STP40189 918 aaPredicted RBP16.26■□□□□ 0.19
CHMP2A-206ENST00000600118 PIP4K2AP48426 406 aaPredicted RBP16.26■□□□□ 0.19
CHMP2A-206ENST00000600118 EIF5P55010 431 aaKnown RBP16.26■□□□□ 0.19
CHMP2A-206ENST00000600118 ALDH1L2Q3SY69 923 aa16.26■□□□□ 0.19
CHMP2A-206ENST00000600118 AMIGO3Q86WK7 504 aa16.26■□□□□ 0.19
CHMP2A-206ENST00000600118 SOCS7O14512 581 aa16.25■□□□□ 0.19
CHMP2A-206ENST00000600118 TCERG1O14776 1098 aaKnown RBP16.25■□□□□ 0.19
CHMP2A-206ENST00000600118 GNPATO15228 680 aa16.25■□□□□ 0.19
CHMP2A-206ENST00000600118 ANXA1P04083 346 aa16.25■□□□□ 0.19
CHMP2A-206ENST00000600118 CANXP27824 592 aaKnown RBP16.25■□□□□ 0.19
CHMP2A-206ENST00000600118 AK7Q96M32 723 aa16.25■□□□□ 0.19
CHMP2A-206ENST00000600118 MYH14Q7Z406 1995 aaKnown RBP16.24■□□□□ 0.19
CHMP2A-206ENST00000600118 BRPF1P55201 1214 aaPredicted RBP16.24■□□□□ 0.19
CHMP2A-206ENST00000600118 SLC15A2Q16348 729 aa16.24■□□□□ 0.19
CHMP2A-206ENST00000600118 MRPL50Q8N5N7 158 aaKnown RBP16.24■□□□□ 0.19
CHMP2A-206ENST00000600118 STK31Q9BXU1 1019 aa16.24■□□□□ 0.19
CHMP2A-206ENST00000600118 HYPKQ9NX55 129 aa16.24■□□□□ 0.19
CHMP2A-206ENST00000600118 SLC4A2P04920 1241 aa16.23■□□□□ 0.19
CHMP2A-206ENST00000600118 STK32BQ9NY57 414 aa16.23■□□□□ 0.19
CHMP2A-206ENST00000600118 RTCBQ9Y3I0 505 aaKnown RBP16.23■□□□□ 0.19
CHMP2A-206ENST00000600118 MYL6BP14649 208 aa16.22■□□□□ 0.19
CHMP2A-206ENST00000600118 ADRA2BP18089 450 aa16.22■□□□□ 0.19
CHMP2A-206ENST00000600118 SSFA2P28290 1259 aa16.22■□□□□ 0.19
CHMP2A-206ENST00000600118 RCAN3Q9UKA8 241 aa16.22■□□□□ 0.19
CHMP2A-206ENST00000600118 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.21■□□□□ 0.19
CHMP2A-206ENST00000600118 SMIM5Q71RC9 77 aa16.21■□□□□ 0.19
CHMP2A-206ENST00000600118 G2E3Q7L622 706 aa16.21■□□□□ 0.19
CHMP2A-206ENST00000600118 XAGE3Q8WTP9 111 aa16.21■□□□□ 0.19
CHMP2A-206ENST00000600118 BCL2L13Q9BXK5 485 aa16.21■□□□□ 0.19
CHMP2A-206ENST00000600118 PHAXQ9H814 394 aaKnown RBP16.21■□□□□ 0.19
CHMP2A-206ENST00000600118 SMC4Q9NTJ3 1288 aa16.21■□□□□ 0.19
CHMP2A-206ENST00000600118 COL15A1P39059 1388 aa16.21■□□□□ 0.19
CHMP2A-206ENST00000600118 BCAR3O75815 825 aa16.2■□□□□ 0.18
CHMP2A-206ENST00000600118 COPS6Q7L5N1 327 aa16.2■□□□□ 0.18
CHMP2A-206ENST00000600118 ARHGEF1Q92888 912 aaKnown RBP16.2■□□□□ 0.18
CHMP2A-206ENST00000600118 TFCP2L1Q9NZI6 479 aa16.2■□□□□ 0.18
CHMP2A-206ENST00000600118 PNPLA7Q6ZV29 1317 aa16.19■□□□□ 0.18
CHMP2A-206ENST00000600118 UBR3Q6ZT12 1888 aa16.19■□□□□ 0.18
CHMP2A-206ENST00000600118 A0A087WZG4 1122 aa16.19■□□□□ 0.18
CHMP2A-206ENST00000600118 FLIIQ13045 1269 aa16.19■□□□□ 0.18
CHMP2A-206ENST00000600118 TRAPPC3LQ5T215 181 aa16.19■□□□□ 0.18
CHMP2A-206ENST00000600118 TTLL7Q6ZT98 887 aa16.19■□□□□ 0.18
CHMP2A-206ENST00000600118 FLAD1Q8NFF5 587 aa16.19■□□□□ 0.18
CHMP2A-206ENST00000600118 PHF14O94880 888 aa16.18■□□□□ 0.18
CHMP2A-206ENST00000600118 COL23A1Q86Y22 540 aaPredicted RBP16.18■□□□□ 0.18
CHMP2A-206ENST00000600118 ZNF330Q9Y3S2 320 aaPredicted RBP16.18■□□□□ 0.18
CHMP2A-206ENST00000600118 RGL2O15211 777 aa16.17■□□□□ 0.18
CHMP2A-206ENST00000600118 CAMTA2O94983 1202 aa16.17■□□□□ 0.18
CHMP2A-206ENST00000600118 DZIP3Q86Y13 1208 aaKnown RBP16.17■□□□□ 0.18
CHMP2A-206ENST00000600118 NARFQ9UHQ1 456 aa16.17■□□□□ 0.18
CHMP2A-206ENST00000600118 TBC1D2BQ9UPU7 963 aa16.17■□□□□ 0.18
CHMP2A-206ENST00000600118 KIF16BQ96L93 1317 aa16.17■□□□□ 0.18
CHMP2A-206ENST00000600118 USP42Q9H9J4 1324 aaKnown RBP16.17■□□□□ 0.18
CHMP2A-206ENST00000600118 ERVV-1B6SEH8 477 aa16.16■□□□□ 0.18
CHMP2A-206ENST00000600118 AIMP1Q12904 312 aaKnown RBP16.16■□□□□ 0.18
CHMP2A-206ENST00000600118 NPM2Q86SE8 214 aaKnown RBP16.16■□□□□ 0.18
CHMP2A-206ENST00000600118 PTPRCP08575 1304 aa16.16■□□□□ 0.18
CHMP2A-206ENST00000600118 MAP3K15Q6ZN16 1313 aa16.16■□□□□ 0.18
CHMP2A-206ENST00000600118 RFC4P35249 363 aa16.15■□□□□ 0.18
CHMP2A-206ENST00000600118 QSER1Q2KHR3 1735 aa16.15■□□□□ 0.18
CHMP2A-206ENST00000600118 KSR2Q6VAB6 950 aa16.15■□□□□ 0.18
CHMP2A-206ENST00000600118 KIF6Q6ZMV9 814 aa16.15■□□□□ 0.18
CHMP2A-206ENST00000600118 ANKRD13DQ6ZTN6 518 aa16.15■□□□□ 0.18
CHMP2A-206ENST00000600118 PLBD2Q8NHP8 589 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms