RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 COL15A1P39059 1388 aa19■□□□□ 0.63
IRF3-224ENST00000599680 SOS1Q07889 1333 aaPredicted RBP19■□□□□ 0.63
IRF3-224ENST00000599680 GRIN3BO60391 1043 aa18.99■□□□□ 0.63
IRF3-224ENST00000599680 ZBTB1Q9Y2K1 713 aa18.99■□□□□ 0.63
IRF3-224ENST00000599680 AFDNP55196 1824 aaKnown RBP18.99■□□□□ 0.63
IRF3-224ENST00000599680 KIAA1551Q9HCM1 1747 aa18.99■□□□□ 0.63
IRF3-224ENST00000599680 MYBBP1AQ9BQG0 1328 aaKnown RBP18.99■□□□□ 0.63
IRF3-224ENST00000599680 CANXP27824 592 aaKnown RBP18.98■□□□□ 0.63
IRF3-224ENST00000599680 LAMB4A4D0S4 1761 aa18.97■□□□□ 0.63
IRF3-224ENST00000599680 KDM3BQ7LBC6 1761 aa18.97■□□□□ 0.63
IRF3-224ENST00000599680 DCTN1Q14203 1278 aa18.97■□□□□ 0.63
IRF3-224ENST00000599680 NPM2Q86SE8 214 aaKnown RBP18.97■□□□□ 0.63
IRF3-224ENST00000599680 SCN7AQ01118 1682 aa18.96■□□□□ 0.63
IRF3-224ENST00000599680 YBX3P16989 372 aaKnown RBP eCLIP18.96■□□□□ 0.63
IRF3-224ENST00000599680 USPL1Q5W0Q7 1092 aa18.96■□□□□ 0.63
IRF3-224ENST00000599680 C10orf71Q711Q0 1435 aa18.96■□□□□ 0.63
IRF3-224ENST00000599680 BRCA1P38398 1863 aaKnown RBP18.96■□□□□ 0.63
IRF3-224ENST00000599680 FKBP8Q14318 412 aa18.95■□□□□ 0.62
IRF3-224ENST00000599680 ZNF330Q9Y3S2 320 aaPredicted RBP18.95■□□□□ 0.62
IRF3-224ENST00000599680 A0A087WZG4 1122 aa18.94■□□□□ 0.62
IRF3-224ENST00000599680 NFE2L2Q16236 605 aa18.94■□□□□ 0.62
IRF3-224ENST00000599680 PLEKHF1Q96S99 279 aa18.94■□□□□ 0.62
IRF3-224ENST00000599680 NARFQ9UHQ1 456 aa18.94■□□□□ 0.62
IRF3-224ENST00000599680 WWC3Q9ULE0 1092 aa18.94■□□□□ 0.62
IRF3-224ENST00000599680 BCORQ6W2J9 1755 aa18.93■□□□□ 0.62
IRF3-224ENST00000599680 KCNQ3O43525 872 aa18.93■□□□□ 0.62
IRF3-224ENST00000599680 TAF7Q15545 349 aaPredicted RBP18.93■□□□□ 0.62
IRF3-224ENST00000599680 PXDNLA1KZ92 1463 aa18.92■□□□□ 0.62
IRF3-224ENST00000599680 TGFB2P61812 414 aa18.92■□□□□ 0.62
IRF3-224ENST00000599680 WDR43Q15061 677 aaKnown RBP eCLIP18.92■□□□□ 0.62
IRF3-224ENST00000599680 ARFGEF1Q9Y6D6 1849 aa18.92■□□□□ 0.62
IRF3-224ENST00000599680 SNRPA1P09661 255 aaKnown RBP18.91■□□□□ 0.62
IRF3-224ENST00000599680 GOLGB1Q14789 3259 aaKnown RBP18.91■□□□□ 0.62
IRF3-224ENST00000599680 NRXN2Q9P2S2 1712 aa18.91■□□□□ 0.62
IRF3-224ENST00000599680 IL6STP40189 918 aaPredicted RBP18.9■□□□□ 0.62
IRF3-224ENST00000599680 EIF5P55010 431 aaKnown RBP18.9■□□□□ 0.62
IRF3-224ENST00000599680 DDR1Q08345 913 aa18.9■□□□□ 0.62
IRF3-224ENST00000599680 PNISRQ8TF01 805 aaKnown RBP18.9■□□□□ 0.62
IRF3-224ENST00000599680 A0A0G2JLW4 131 aa18.89■□□□□ 0.61
IRF3-224ENST00000599680 A1BGP04217 495 aa18.89■□□□□ 0.61
IRF3-224ENST00000599680 UTRNP46939 3433 aa18.88■□□□□ 0.61
IRF3-224ENST00000599680 POLRMTO00411 1230 aaKnown RBP18.88■□□□□ 0.61
IRF3-224ENST00000599680 TM4SF1P30408 202 aa18.88■□□□□ 0.61
IRF3-224ENST00000599680 ZNF784Q8NCA9 323 aaPredicted RBP18.88■□□□□ 0.61
IRF3-224ENST00000599680 PRKRIP1Q9H875 184 aaPredicted RBP18.88■□□□□ 0.61
IRF3-224ENST00000599680 MIS18AQ9NYP9 233 aa18.88■□□□□ 0.61
IRF3-224ENST00000599680 DLEC1Q9Y238 1755 aa18.88■□□□□ 0.61
IRF3-224ENST00000599680 DPEP1P16444 411 aa18.87■□□□□ 0.61
IRF3-224ENST00000599680 RIPK4P57078 832 aa18.87■□□□□ 0.61
IRF3-224ENST00000599680 NFIXQ14938 502 aa18.87■□□□□ 0.61
IRF3-224ENST00000599680 TBC1D2BQ9UPU7 963 aa18.87■□□□□ 0.61
IRF3-224ENST00000599680 BCS1LQ9Y276 419 aa18.87■□□□□ 0.61
IRF3-224ENST00000599680 USP16Q9Y5T5 823 aa18.87■□□□□ 0.61
IRF3-224ENST00000599680 LMOD3Q0VAK6 560 aa18.86■□□□□ 0.61
IRF3-224ENST00000599680 BICDL1Q6ZP65 573 aa18.86■□□□□ 0.61
IRF3-224ENST00000599680 THUMPD2Q9BTF0 503 aaKnown RBP18.86■□□□□ 0.61
IRF3-224ENST00000599680 PRAMEF22A3QJZ6 481 aa18.85■□□□□ 0.61
IRF3-224ENST00000599680 CCDC146Q8IYE0 955 aa18.85■□□□□ 0.61
IRF3-224ENST00000599680 BCL2L12Q9HB09 334 aa18.85■□□□□ 0.61
IRF3-224ENST00000599680 SERPINB2P05120 415 aa18.84■□□□□ 0.61
IRF3-224ENST00000599680 PIP4K2AP48426 406 aaPredicted RBP18.84■□□□□ 0.61
IRF3-224ENST00000599680 DZIP3Q86Y13 1208 aaKnown RBP18.84■□□□□ 0.61
IRF3-224ENST00000599680 CACNA1SQ13698 1873 aa18.84■□□□□ 0.61
IRF3-224ENST00000599680 ANKRD31Q8N7Z5 1873 aa18.84■□□□□ 0.61
IRF3-224ENST00000599680 TMPOP42166 694 aaKnown RBP18.83■□□□□ 0.6
IRF3-224ENST00000599680 NEUROD2Q15784 382 aa18.83■□□□□ 0.6
IRF3-224ENST00000599680 RUNDC1Q96C34 613 aa18.83■□□□□ 0.6
IRF3-224ENST00000599680 PIM2Q9P1W9 311 aa18.83■□□□□ 0.6
IRF3-224ENST00000599680 NUP98P52948 1817 aa18.83■□□□□ 0.6
IRF3-224ENST00000599680 NPHP1O15259 732 aa18.82■□□□□ 0.6
IRF3-224ENST00000599680 TBC1D9BQ66K14 1250 aa18.82■□□□□ 0.6
IRF3-224ENST00000599680 RRP7AQ9Y3A4 280 aaKnown RBP18.82■□□□□ 0.6
IRF3-224ENST00000599680 CARMIL3Q8ND23 1372 aa18.81■□□□□ 0.6
IRF3-224ENST00000599680 TSPYL4Q9UJ04 414 aa18.81■□□□□ 0.6
IRF3-224ENST00000599680 ZNF652Q9Y2D9 606 aa18.81■□□□□ 0.6
IRF3-224ENST00000599680 CAMTA2O94983 1202 aa18.8■□□□□ 0.6
IRF3-224ENST00000599680 CHRNA5P30532 468 aa18.8■□□□□ 0.6
IRF3-224ENST00000599680 EIF4A1P60842 406 aaKnown RBP18.8■□□□□ 0.6
IRF3-224ENST00000599680 DALRD3Q5D0E6 543 aaKnown RBP18.8■□□□□ 0.6
IRF3-224ENST00000599680 SETDB2Q96T68 719 aa18.8■□□□□ 0.6
IRF3-224ENST00000599680 ADAMTS8Q9UP79 889 aa18.8■□□□□ 0.6
IRF3-224ENST00000599680 ARHGAP27Q6ZUM4 889 aa18.79■□□□□ 0.6
IRF3-224ENST00000599680 CCDC88AQ3V6T2 1871 aa18.78■□□□□ 0.6
IRF3-224ENST00000599680 COL11A2P13942 1736 aaPredicted RBP18.78■□□□□ 0.6
IRF3-224ENST00000599680 ATP10DQ9P241 1426 aa18.78■□□□□ 0.6
IRF3-224ENST00000599680 ZNF316A6NFI3 1004 aaPredicted RBP18.78■□□□□ 0.6
IRF3-224ENST00000599680 GIGYF1O75420 1035 aaPredicted RBP18.78■□□□□ 0.6
IRF3-224ENST00000599680 KCNA3P22001 575 aa18.78■□□□□ 0.6
IRF3-224ENST00000599680 SBF1O95248 1867 aa18.77■□□□□ 0.6
IRF3-224ENST00000599680 NBPF26B4DH59 902 aa18.77■□□□□ 0.6
IRF3-224ENST00000599680 NBPF10Q6P3W6 841 aaKnown RBP18.77■□□□□ 0.6
IRF3-224ENST00000599680 NBPF15Q8N660 670 aa18.77■□□□□ 0.6
IRF3-224ENST00000599680 H0YIN7 160 aa18.76■□□□□ 0.59
IRF3-224ENST00000599680 ST5P78524 1137 aa18.76■□□□□ 0.59
IRF3-224ENST00000599680 CLEC4GQ6UXB4 293 aa18.76■□□□□ 0.59
IRF3-224ENST00000599680 C2CD5Q86YS7 1000 aa18.76■□□□□ 0.59
IRF3-224ENST00000599680 CNBD1Q8NA66 436 aa18.76■□□□□ 0.59
IRF3-224ENST00000599680 BABAM1Q9NWV8 329 aa18.76■□□□□ 0.59
IRF3-224ENST00000599680 PDE6BP35913 854 aa18.75■□□□□ 0.59
IRF3-224ENST00000599680 NGEFQ8N5V2 710 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms