RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 NLRP8Q86W28 1048 aa12.21□□□□□ -0.45
LINC00343-208ENST00000599264 OGFOD1Q8N543 542 aa12.21□□□□□ -0.45
LINC00343-208ENST00000599264 THBS1P07996 1170 aa12.2□□□□□ -0.46
LINC00343-208ENST00000599264 TFIP11Q9UBB9 837 aaKnown RBP12.2□□□□□ -0.46
LINC00343-208ENST00000599264 CLDN10P78369 228 aa12.19□□□□□ -0.46
LINC00343-208ENST00000599264 GJA3Q9Y6H8 435 aa12.19□□□□□ -0.46
LINC00343-208ENST00000599264 ZBTB7BO15156 539 aaPredicted RBP12.18□□□□□ -0.46
LINC00343-208ENST00000599264 BCRP11274 1271 aa12.18□□□□□ -0.46
LINC00343-208ENST00000599264 ATP4AP20648 1035 aa12.18□□□□□ -0.46
LINC00343-208ENST00000599264 ZNF295-AS1Q8N0V1 137 aa12.18□□□□□ -0.46
LINC00343-208ENST00000599264 LRRC4BQ9NT99 713 aa12.18□□□□□ -0.46
LINC00343-208ENST00000599264 CHMP3Q9Y3E7 222 aa12.18□□□□□ -0.46
LINC00343-208ENST00000599264 PCDHGC4Q9Y5F7 938 aa12.18□□□□□ -0.46
LINC00343-208ENST00000599264 KCNMA1Q12791 1236 aa12.17□□□□□ -0.46
LINC00343-208ENST00000599264 UBAP2LQ14157 1087 aaKnown RBP12.17□□□□□ -0.46
LINC00343-208ENST00000599264 SCARF2Q96GP6 870 aaPredicted RBP12.17□□□□□ -0.46
LINC00343-208ENST00000599264 MAFBQ9Y5Q3 323 aaPredicted RBP12.17□□□□□ -0.46
LINC00343-208ENST00000599264 USP3Q9Y6I4 520 aa12.17□□□□□ -0.46
LINC00343-208ENST00000599264 A0A1W2PNR3 127 aa12.16□□□□□ -0.46
LINC00343-208ENST00000599264 M0R2N6 131 aa12.16□□□□□ -0.46
LINC00343-208ENST00000599264 RASA1P20936 1047 aa12.16□□□□□ -0.46
LINC00343-208ENST00000599264 TEAD4Q15561 434 aa12.16□□□□□ -0.46
LINC00343-208ENST00000599264 BICDL1Q6ZP65 573 aa12.16□□□□□ -0.46
LINC00343-208ENST00000599264 SLC9A9Q8IVB4 645 aa12.16□□□□□ -0.46
LINC00343-208ENST00000599264 TNS4Q8IZW8 715 aa12.16□□□□□ -0.46
LINC00343-208ENST00000599264 ACDQ96AP0 544 aa12.16□□□□□ -0.46
LINC00343-208ENST00000599264 ZCCHC2Q9C0B9 1178 aaKnown RBP12.16□□□□□ -0.46
LINC00343-208ENST00000599264 ZNF232Q9UNY5 417 aa12.16□□□□□ -0.46
LINC00343-208ENST00000599264 KIAA1024Q9UPX6 916 aa12.16□□□□□ -0.46
LINC00343-208ENST00000599264 BMP4P12644 408 aa12.15□□□□□ -0.46
LINC00343-208ENST00000599264 FGFR3P22607 806 aa12.15□□□□□ -0.46
LINC00343-208ENST00000599264 NOS2P35228 1153 aa12.15□□□□□ -0.46
LINC00343-208ENST00000599264 FOXK2Q01167 660 aa12.15□□□□□ -0.46
LINC00343-208ENST00000599264 LARP1Q6PKG0 1096 aaKnown RBP12.15□□□□□ -0.46
LINC00343-208ENST00000599264 SIX5Q8N196 739 aa12.15□□□□□ -0.46
LINC00343-208ENST00000599264 NEDD1Q8NHV4 660 aa12.15□□□□□ -0.46
LINC00343-208ENST00000599264 L3MBTL2Q969R5 705 aa12.15□□□□□ -0.46
LINC00343-208ENST00000599264 ABHD17AQ96GS6 310 aa12.15□□□□□ -0.46
LINC00343-208ENST00000599264 OXCT2Q9BYC2 517 aaPredicted RBP12.15□□□□□ -0.46
LINC00343-208ENST00000599264 PPP1R12CQ9BZL4 782 aa12.15□□□□□ -0.46
LINC00343-208ENST00000599264 ATXN7O15265 892 aaPredicted RBP12.14□□□□□ -0.47
LINC00343-208ENST00000599264 BNIP3LO60238 219 aa12.14□□□□□ -0.47
LINC00343-208ENST00000599264 EPHA4P54764 986 aa12.14□□□□□ -0.47
LINC00343-208ENST00000599264 ZNF594Q96JF6 807 aaPredicted RBP12.14□□□□□ -0.47
LINC00343-208ENST00000599264 NDFIP2Q9NV92 336 aa12.14□□□□□ -0.47
LINC00343-208ENST00000599264 GDF2Q9UK05 429 aaPredicted RBP12.14□□□□□ -0.47
LINC00343-208ENST00000599264 PARP3Q9Y6F1 533 aa12.14□□□□□ -0.47
LINC00343-208ENST00000599264 CCDC180Q9P1Z9 1646 aa12.14□□□□□ -0.47
LINC00343-208ENST00000599264 SERTM1A2A2V5 107 aa12.13□□□□□ -0.47
LINC00343-208ENST00000599264 NEUROD4Q9HD90 331 aa12.13□□□□□ -0.47
LINC00343-208ENST00000599264 PSMA6P60900 246 aaKnown RBP12.12□□□□□ -0.47
LINC00343-208ENST00000599264 KLRG1Q96E93 195 aa12.12□□□□□ -0.47
LINC00343-208ENST00000599264 ZIC5Q96T25 663 aa12.12□□□□□ -0.47
LINC00343-208ENST00000599264 GOLGA6L1Q8N7Z2 621 aa12.11□□□□□ -0.47
LINC00343-208ENST00000599264 GPC6Q9Y625 555 aaPredicted RBP12.11□□□□□ -0.47
LINC00343-208ENST00000599264 OIP5O43482 229 aa12.1□□□□□ -0.47
LINC00343-208ENST00000599264 SEC13P55735 322 aa12.1□□□□□ -0.47
LINC00343-208ENST00000599264 TBCELQ5QJ74 424 aa12.1□□□□□ -0.47
LINC00343-208ENST00000599264 PODNQ7Z5L7 613 aa12.1□□□□□ -0.47
LINC00343-208ENST00000599264 ZDHHC1Q8WTX9 485 aa12.1□□□□□ -0.47
LINC00343-208ENST00000599264 TXLNAP40222 546 aa12.09□□□□□ -0.47
LINC00343-208ENST00000599264 VRTNQ9H8Y1 702 aa12.09□□□□□ -0.47
LINC00343-208ENST00000599264 SFI1A8K8P3 1242 aa12.08□□□□□ -0.48
LINC00343-208ENST00000599264 PHF20L1A8MW92 1017 aa12.08□□□□□ -0.48
LINC00343-208ENST00000599264 KHNYNO15037 678 aaKnown RBP12.08□□□□□ -0.48
LINC00343-208ENST00000599264 LMOD1P29536 600 aaPredicted RBP12.08□□□□□ -0.48
LINC00343-208ENST00000599264 CTBSQ01459 385 aa12.08□□□□□ -0.48
LINC00343-208ENST00000599264 SAMD5Q5TGI4 173 aa12.08□□□□□ -0.48
LINC00343-208ENST00000599264 KANK3Q6NY19 840 aa12.08□□□□□ -0.48
LINC00343-208ENST00000599264 TMEM151AQ8N4L1 468 aa12.08□□□□□ -0.48
LINC00343-208ENST00000599264 BEND7Q8N7W2 519 aaPredicted RBP12.08□□□□□ -0.48
LINC00343-208ENST00000599264 TSPAN10Q9H1Z9 355 aaPredicted RBP12.08□□□□□ -0.48
LINC00343-208ENST00000599264 ZNF777Q9ULD5 760 aaPredicted RBP12.08□□□□□ -0.48
LINC00343-208ENST00000599264 DCDC2BA2VCK2 349 aa12.07□□□□□ -0.48
LINC00343-208ENST00000599264 FAM157BP0CG42 384 aa12.07□□□□□ -0.48
LINC00343-208ENST00000599264 MAPTP10636 758 aaKnown RBP12.07□□□□□ -0.48
LINC00343-208ENST00000599264 RASSF7Q02833 373 aa12.07□□□□□ -0.48
LINC00343-208ENST00000599264 TNP2Q05952 138 aa12.07□□□□□ -0.48
LINC00343-208ENST00000599264 TSEN2Q8NCE0 465 aaKnown RBP12.07□□□□□ -0.48
LINC00343-208ENST00000599264 EML1O00423 815 aa12.06□□□□□ -0.48
LINC00343-208ENST00000599264 GDF11O95390 407 aa12.06□□□□□ -0.48
LINC00343-208ENST00000599264 IRS1P35568 1242 aa12.06□□□□□ -0.48
LINC00343-208ENST00000599264 FAM182BQ5T319 152 aa12.06□□□□□ -0.48
LINC00343-208ENST00000599264 GALNT6Q8NCL4 622 aa12.06□□□□□ -0.48
LINC00343-208ENST00000599264 GAS2L2Q8NHY3 880 aa12.06□□□□□ -0.48
LINC00343-208ENST00000599264 PPP1R12BO60237 982 aaPredicted RBP12.05□□□□□ -0.48
LINC00343-208ENST00000599264 LAMC2Q13753 1193 aa12.05□□□□□ -0.48
LINC00343-208ENST00000599264 C1orf53Q5VUE5 145 aa12.05□□□□□ -0.48
LINC00343-208ENST00000599264 RHPN1Q8TCX5 695 aa12.05□□□□□ -0.48
LINC00343-208ENST00000599264 FAM196BA6NMK8 535 aa12.04□□□□□ -0.48
LINC00343-208ENST00000599264 C2CD2LO14523 706 aa12.04□□□□□ -0.48
LINC00343-208ENST00000599264 DKK1O94907 266 aa12.04□□□□□ -0.48
LINC00343-208ENST00000599264 ARAFP10398 606 aa12.04□□□□□ -0.48
LINC00343-208ENST00000599264 HIRAP54198 1017 aaPredicted RBP12.04□□□□□ -0.48
LINC00343-208ENST00000599264 KANK4Q5T7N3 995 aaPredicted RBP12.04□□□□□ -0.48
LINC00343-208ENST00000599264 EDARADDQ8WWZ3 215 aa12.04□□□□□ -0.48
LINC00343-208ENST00000599264 ANKIB1Q9P2G1 1089 aa12.04□□□□□ -0.48
LINC00343-208ENST00000599264 PTK7Q13308 1070 aa12.03□□□□□ -0.48
LINC00343-208ENST00000599264 LRRC69Q6ZNQ3 347 aa12.03□□□□□ -0.48
LINC00343-208ENST00000599264 SLCO4C1Q6ZQN7 724 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms