RNA–Protein interactions for RNA: ENST00000599179.1

LINC00343-207, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-207ENST00000599179 ADAMTS8Q9UP79 889 aa11.53□□□□□ -0.56
LINC00343-207ENST00000599179 RNFT1Q5M7Z0 435 aa11.52□□□□□ -0.57
LINC00343-207ENST00000599179 BCANQ96GW7 911 aa11.52□□□□□ -0.57
LINC00343-207ENST00000599179 CEP170BQ9Y4F5 1589 aaPredicted RBP11.51□□□□□ -0.57
LINC00343-207ENST00000599179 FOXD4L5Q5VV16 416 aaPredicted RBP11.51□□□□□ -0.57
LINC00343-207ENST00000599179 ZNF385CQ66K41 422 aaPredicted RBP11.51□□□□□ -0.57
LINC00343-207ENST00000599179 LYSMD3Q7Z3D4 306 aa11.51□□□□□ -0.57
LINC00343-207ENST00000599179 TMEM151AQ8N4L1 468 aa11.51□□□□□ -0.57
LINC00343-207ENST00000599179 PCMTD1Q96MG8 357 aaPredicted RBP11.51□□□□□ -0.57
LINC00343-207ENST00000599179 CPS1P31327 1500 aa11.5□□□□□ -0.57
LINC00343-207ENST00000599179 KIF14Q15058 1648 aa11.5□□□□□ -0.57
LINC00343-207ENST00000599179 MYO5CQ9NQX4 1742 aa11.5□□□□□ -0.57
LINC00343-207ENST00000599179 SENP3-EIF4A1A0A087X0R7 540 aa11.5□□□□□ -0.57
LINC00343-207ENST00000599179 PTPRKQ15262 1439 aa11.5□□□□□ -0.57
LINC00343-207ENST00000599179 SHANK2Q9UPX8 1470 aa11.5□□□□□ -0.57
LINC00343-207ENST00000599179 MYO3AQ8NEV4 1616 aa11.49□□□□□ -0.57
LINC00343-207ENST00000599179 ALKQ9UM73 1620 aa11.49□□□□□ -0.57
LINC00343-207ENST00000599179 ADD1P35611 737 aaKnown RBP11.49□□□□□ -0.57
LINC00343-207ENST00000599179 GSK3AP49840 483 aa11.49□□□□□ -0.57
LINC00343-207ENST00000599179 SRCAPQ6ZRS2 3230 aa11.48□□□□□ -0.57
LINC00343-207ENST00000599179 ZBBXA8MT70 800 aa11.48□□□□□ -0.57
LINC00343-207ENST00000599179 GDF11O95390 407 aa11.48□□□□□ -0.57
LINC00343-207ENST00000599179 RASSF7Q02833 373 aa11.48□□□□□ -0.57
LINC00343-207ENST00000599179 ZNF592Q92610 1267 aa11.48□□□□□ -0.57
LINC00343-207ENST00000599179 TRIM34Q9BYJ4 488 aa11.48□□□□□ -0.57
LINC00343-207ENST00000599179 ZNF142P52746 1687 aaPredicted RBP11.48□□□□□ -0.57
LINC00343-207ENST00000599179 TROQ12816 1431 aaPredicted RBP11.47□□□□□ -0.57
LINC00343-207ENST00000599179 RNF144AP50876 292 aaPredicted RBP11.47□□□□□ -0.57
LINC00343-207ENST00000599179 KDF1Q8NAX2 398 aaPredicted RBP11.47□□□□□ -0.57
LINC00343-207ENST00000599179 GMCL1Q96IK5 515 aa11.47□□□□□ -0.57
LINC00343-207ENST00000599179 CYLDQ9NQC7 956 aa11.47□□□□□ -0.57
LINC00343-207ENST00000599179 CDK11AQ9UQ88 783 aaPredicted RBP11.47□□□□□ -0.57
LINC00343-207ENST00000599179 ABCC1P33527 1531 aa11.46□□□□□ -0.57
LINC00343-207ENST00000599179 MROH2AA6NES4 1674 aa11.46□□□□□ -0.58
LINC00343-207ENST00000599179 ATP5J2-PTCD1G3V325 749 aa11.45□□□□□ -0.58
LINC00343-207ENST00000599179 GPC1P35052 558 aa11.45□□□□□ -0.58
LINC00343-207ENST00000599179 MCCD1P59942 119 aaPredicted RBP11.45□□□□□ -0.58
LINC00343-207ENST00000599179 RNF20Q5VTR2 975 aa11.45□□□□□ -0.58
LINC00343-207ENST00000599179 POTEAQ6S8J7 498 aa11.45□□□□□ -0.58
LINC00343-207ENST00000599179 KCTD17Q8N5Z5 321 aa11.45□□□□□ -0.58
LINC00343-207ENST00000599179 A2ML1A8K2U0 1454 aa11.44□□□□□ -0.58
LINC00343-207ENST00000599179 SRSF11Q05519 484 aaKnown RBP11.44□□□□□ -0.58
LINC00343-207ENST00000599179 PCDHB9Q9Y5E1 797 aa11.44□□□□□ -0.58
LINC00343-207ENST00000599179 NEURL4Q96JN8 1562 aa11.44□□□□□ -0.58
LINC00343-207ENST00000599179 KIDINS220Q9ULH0 1771 aa11.44□□□□□ -0.58
LINC00343-207ENST00000599179 CLIP1P30622 1438 aa11.43□□□□□ -0.58
LINC00343-207ENST00000599179 ARHGEF15O94989 841 aa11.43□□□□□ -0.58
LINC00343-207ENST00000599179 VWDEQ8N2E2 1590 aa11.42□□□□□ -0.58
LINC00343-207ENST00000599179 ADAMTS2O95450 1211 aa11.42□□□□□ -0.58
LINC00343-207ENST00000599179 MARSP56192 900 aaKnown RBP11.42□□□□□ -0.58
LINC00343-207ENST00000599179 MAP3K10Q02779 954 aa11.42□□□□□ -0.58
LINC00343-207ENST00000599179 GGT6Q6P531 493 aa11.42□□□□□ -0.58
LINC00343-207ENST00000599179 CLTCQ00610 1675 aaKnown RBP11.41□□□□□ -0.58
LINC00343-207ENST00000599179 KANK3Q6NY19 840 aa11.41□□□□□ -0.58
LINC00343-207ENST00000599179 FOXR1Q6PIV2 292 aa11.41□□□□□ -0.58
LINC00343-207ENST00000599179 PRICKLE2Q7Z3G6 844 aa11.41□□□□□ -0.58
LINC00343-207ENST00000599179 WHAMMQ8TF30 809 aa11.41□□□□□ -0.58
LINC00343-207ENST00000599179 SCARF2Q96GP6 870 aaPredicted RBP11.41□□□□□ -0.58
LINC00343-207ENST00000599179 DNMT1P26358 1616 aaKnown RBP11.41□□□□□ -0.58
LINC00343-207ENST00000599179 SPAG9O60271 1321 aaKnown RBP11.4□□□□□ -0.58
LINC00343-207ENST00000599179 GIGYF1O75420 1035 aaPredicted RBP11.4□□□□□ -0.58
LINC00343-207ENST00000599179 FBXO45P0C2W1 286 aa11.4□□□□□ -0.58
LINC00343-207ENST00000599179 CC2D2BQ6DHV5 1058 aa11.4□□□□□ -0.58
LINC00343-207ENST00000599179 ZNF330Q9Y3S2 320 aaPredicted RBP11.4□□□□□ -0.58
LINC00343-207ENST00000599179 ERVK-9P63128 1117 aa11.39□□□□□ -0.59
LINC00343-207ENST00000599179 FMN1Q68DA7 1419 aa11.39□□□□□ -0.59
LINC00343-207ENST00000599179 ANKLE2Q86XL3 938 aa11.39□□□□□ -0.59
LINC00343-207ENST00000599179 SAMD9LQ8IVG5 1584 aa11.39□□□□□ -0.59
LINC00343-207ENST00000599179 TRIM22Q8IYM9 498 aa11.39□□□□□ -0.59
LINC00343-207ENST00000599179 GJD4Q96KN9 370 aaPredicted RBP11.39□□□□□ -0.59
LINC00343-207ENST00000599179 ENAMQ9NRM1 1142 aa11.39□□□□□ -0.59
LINC00343-207ENST00000599179 DNMT3AQ9Y6K1 912 aaPredicted RBP11.39□□□□□ -0.59
LINC00343-207ENST00000599179 ITSN2Q9NZM3 1697 aa11.39□□□□□ -0.59
LINC00343-207ENST00000599179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINC00343-207ENST00000599179 SUPT6HQ7KZ85 1726 aaKnown RBP11.38□□□□□ -0.59
LINC00343-207ENST00000599179 MEN1O00255 615 aa11.38□□□□□ -0.59
LINC00343-207ENST00000599179 CYP2U1Q7Z449 544 aa11.38□□□□□ -0.59
LINC00343-207ENST00000599179 ZNF777Q9ULD5 760 aaPredicted RBP11.38□□□□□ -0.59
LINC00343-207ENST00000599179 LRRC7Q96NW7 1537 aa11.38□□□□□ -0.59
LINC00343-207ENST00000599179 TNRQ92752 1358 aa11.38□□□□□ -0.59
LINC00343-207ENST00000599179 A2MP01023 1474 aa11.38□□□□□ -0.59
LINC00343-207ENST00000599179 CDC42BPBQ9Y5S2 1711 aa11.38□□□□□ -0.59
LINC00343-207ENST00000599179 NPHP4O75161 1426 aaPredicted RBP11.37□□□□□ -0.59
LINC00343-207ENST00000599179 H7C1W4 665 aa11.37□□□□□ -0.59
LINC00343-207ENST00000599179 ZNF837Q96EG3 531 aaPredicted RBP11.37□□□□□ -0.59
LINC00343-207ENST00000599179 NLRP3Q96P20 1036 aa11.37□□□□□ -0.59
LINC00343-207ENST00000599179 MBIPQ9NS73 344 aa11.37□□□□□ -0.59
LINC00343-207ENST00000599179 CUEDC1Q9NWM3 386 aaPredicted RBP11.37□□□□□ -0.59
LINC00343-207ENST00000599179 DYRK1BQ9Y463 629 aa11.37□□□□□ -0.59
LINC00343-207ENST00000599179 PREX2Q70Z35 1606 aa11.37□□□□□ -0.59
LINC00343-207ENST00000599179 PLXNC1O60486 1568 aa11.37□□□□□ -0.59
LINC00343-207ENST00000599179 A0A1W2PRU2 124 aa11.36□□□□□ -0.59
LINC00343-207ENST00000599179 RHOQP17081 205 aa11.36□□□□□ -0.59
LINC00343-207ENST00000599179 HNRNPMP52272 730 aaKnown RBP eCLIP11.36□□□□□ -0.59
LINC00343-207ENST00000599179 GAS6Q14393 721 aa11.36□□□□□ -0.59
LINC00343-207ENST00000599179 APBB1O00213 710 aa11.35□□□□□ -0.59
LINC00343-207ENST00000599179 IGHA1P01876 353 aa11.35□□□□□ -0.59
LINC00343-207ENST00000599179 IRS1P35568 1242 aa11.35□□□□□ -0.59
LINC00343-207ENST00000599179 FOXK2Q01167 660 aa11.35□□□□□ -0.59
LINC00343-207ENST00000599179 NR1H3Q13133 447 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms