RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 USP46P62068 366 aa11.69□□□□□ -0.54
LINC00343-206ENST00000598478 CCDC102AQ96A19 550 aa11.69□□□□□ -0.54
LINC00343-206ENST00000598478 USB1Q9BQ65 265 aaKnown RBP11.69□□□□□ -0.54
LINC00343-206ENST00000598478 C1QTNF8P60827 252 aa11.68□□□□□ -0.54
LINC00343-206ENST00000598478 CRIPAKQ8N1N5 446 aa11.68□□□□□ -0.54
LINC00343-206ENST00000598478 HLA-CQ95604 372 aa11.68□□□□□ -0.54
LINC00343-206ENST00000598478 CDC42BPGQ6DT37 1551 aa11.67□□□□□ -0.54
LINC00343-206ENST00000598478 FAM83GA6ND36 823 aa11.67□□□□□ -0.54
LINC00343-206ENST00000598478 AVPP01185 164 aa11.67□□□□□ -0.54
LINC00343-206ENST00000598478 LRPPRCP42704 1394 aaKnown RBP11.67□□□□□ -0.54
LINC00343-206ENST00000598478 GOLGB1Q14789 3259 aaKnown RBP11.66□□□□□ -0.54
LINC00343-206ENST00000598478 ABCA3Q99758 1704 aa11.66□□□□□ -0.54
LINC00343-206ENST00000598478 DXOO77932 396 aaKnown RBP11.66□□□□□ -0.54
LINC00343-206ENST00000598478 TRIM37O94972 964 aa11.66□□□□□ -0.54
LINC00343-206ENST00000598478 TRIM32Q13049 653 aa11.66□□□□□ -0.54
LINC00343-206ENST00000598478 HFM1A2PYH4 1435 aa11.66□□□□□ -0.54
LINC00343-206ENST00000598478 NUP188Q5SRE5 1749 aa11.66□□□□□ -0.54
LINC00343-206ENST00000598478 NRAPQ86VF7 1730 aa11.66□□□□□ -0.54
LINC00343-206ENST00000598478 HOXA2O43364 376 aa11.65□□□□□ -0.54
LINC00343-206ENST00000598478 KRT28Q7Z3Y7 464 aa11.65□□□□□ -0.54
LINC00343-206ENST00000598478 SPON1Q9HCB6 807 aa11.65□□□□□ -0.54
LINC00343-206ENST00000598478 NINLQ9Y2I6 1382 aa11.65□□□□□ -0.55
LINC00343-206ENST00000598478 RREB1Q92766 1687 aa11.65□□□□□ -0.55
LINC00343-206ENST00000598478 TTC24A2A3L6 582 aaPredicted RBP11.64□□□□□ -0.55
LINC00343-206ENST00000598478 WNT7AO00755 349 aa11.64□□□□□ -0.55
LINC00343-206ENST00000598478 KCNQ2O43526 872 aa11.64□□□□□ -0.55
LINC00343-206ENST00000598478 APBA3O96018 575 aa11.64□□□□□ -0.55
LINC00343-206ENST00000598478 FAM50AQ14320 339 aaKnown RBP11.64□□□□□ -0.55
LINC00343-206ENST00000598478 GPCPD1Q9NPB8 672 aa11.64□□□□□ -0.55
LINC00343-206ENST00000598478 NUP155O75694 1391 aa11.64□□□□□ -0.55
LINC00343-206ENST00000598478 ADGRB2O60241 1585 aa11.63□□□□□ -0.55
LINC00343-206ENST00000598478 NAIPQ13075 1403 aa11.63□□□□□ -0.55
LINC00343-206ENST00000598478 AXIN1O15169 862 aa11.63□□□□□ -0.55
LINC00343-206ENST00000598478 CLCN1P35523 988 aa11.63□□□□□ -0.55
LINC00343-206ENST00000598478 BTG4Q9NY30 223 aa11.63□□□□□ -0.55
LINC00343-206ENST00000598478 DACH1Q9UI36 760 aa11.63□□□□□ -0.55
LINC00343-206ENST00000598478 CLTCL1P53675 1640 aa11.63□□□□□ -0.55
LINC00343-206ENST00000598478 THSD7AQ9UPZ6 1657 aa11.62□□□□□ -0.55
LINC00343-206ENST00000598478 CCDC144AA2RUR9 1427 aa11.62□□□□□ -0.55
LINC00343-206ENST00000598478 TNS3Q68CZ2 1445 aa11.62□□□□□ -0.55
LINC00343-206ENST00000598478 PRAG1Q86YV5 1406 aa11.62□□□□□ -0.55
LINC00343-206ENST00000598478 CTC1Q2NKJ3 1217 aa11.62□□□□□ -0.55
LINC00343-206ENST00000598478 FAM217BQ9NTX9 383 aaPredicted RBP11.62□□□□□ -0.55
LINC00343-206ENST00000598478 GUCA2AQ02747 115 aa11.61□□□□□ -0.55
LINC00343-206ENST00000598478 WAPLQ7Z5K2 1190 aa11.61□□□□□ -0.55
LINC00343-206ENST00000598478 RGPD8O14715 1765 aaPredicted RBP11.61□□□□□ -0.55
LINC00343-206ENST00000598478 KIF1AQ12756 1690 aa11.6□□□□□ -0.55
LINC00343-206ENST00000598478 NBPF8Q3BBV2 869 aa11.6□□□□□ -0.55
LINC00343-206ENST00000598478 NBPF14Q5TI25 921 aa11.6□□□□□ -0.55
LINC00343-206ENST00000598478 CCDC24Q8N4L8 307 aa11.6□□□□□ -0.55
LINC00343-206ENST00000598478 SNIP1Q8TAD8 396 aaKnown RBP11.6□□□□□ -0.55
LINC00343-206ENST00000598478 SPATA31A5Q5VU36 1347 aa11.6□□□□□ -0.55
LINC00343-206ENST00000598478 SPATA31A7Q8IWB4 1347 aa11.6□□□□□ -0.55
LINC00343-206ENST00000598478 PARD3Q8TEW0 1356 aa11.59□□□□□ -0.55
LINC00343-206ENST00000598478 SMPD1P17405 629 aa11.59□□□□□ -0.55
LINC00343-206ENST00000598478 SMCPP49901 116 aaPredicted RBP11.59□□□□□ -0.55
LINC00343-206ENST00000598478 KRI1Q8N9T8 703 aaKnown RBP11.59□□□□□ -0.55
LINC00343-206ENST00000598478 MRGPRX2Q96LB1 330 aa11.59□□□□□ -0.55
LINC00343-206ENST00000598478 FMN2Q9NZ56 1722 aa11.59□□□□□ -0.55
LINC00343-206ENST00000598478 NRKQ7Z2Y5 1582 aa11.58□□□□□ -0.55
LINC00343-206ENST00000598478 KIF1BO60333 1816 aa11.58□□□□□ -0.56
LINC00343-206ENST00000598478 FAM196AQ6ZSG2 479 aa11.58□□□□□ -0.56
LINC00343-206ENST00000598478 STK26Q9P289 416 aa11.58□□□□□ -0.56
LINC00343-206ENST00000598478 CHD4Q14839 1912 aa11.58□□□□□ -0.56
LINC00343-206ENST00000598478 PLEKHH1Q9ULM0 1364 aa11.57□□□□□ -0.56
LINC00343-206ENST00000598478 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.57□□□□□ -0.56
LINC00343-206ENST00000598478 NUTM1Q86Y26 1132 aa11.57□□□□□ -0.56
LINC00343-206ENST00000598478 PDGFDQ9GZP0 370 aaPredicted RBP11.57□□□□□ -0.56
LINC00343-206ENST00000598478 GMPR2Q9P2T1 348 aaKnown RBP11.57□□□□□ -0.56
LINC00343-206ENST00000598478 COL14A1Q05707 1796 aaKnown RBP11.56□□□□□ -0.56
LINC00343-206ENST00000598478 MYOM1P52179 1685 aa11.56□□□□□ -0.56
LINC00343-206ENST00000598478 JUNDP17535 347 aa11.56□□□□□ -0.56
LINC00343-206ENST00000598478 PSME1Q06323 249 aa11.56□□□□□ -0.56
LINC00343-206ENST00000598478 SYMPKQ92797 1274 aaKnown RBP11.56□□□□□ -0.56
LINC00343-206ENST00000598478 J3QL48 77 aa11.55□□□□□ -0.56
LINC00343-206ENST00000598478 REPIN1Q9BWE0 567 aaKnown RBP11.55□□□□□ -0.56
LINC00343-206ENST00000598478 ARHGEF10O15013 1369 aa11.54□□□□□ -0.56
LINC00343-206ENST00000598478 C11orf95C9JLR9 678 aaPredicted RBP11.54□□□□□ -0.56
LINC00343-206ENST00000598478 CASZ1Q86V15 1759 aa11.54□□□□□ -0.56
LINC00343-206ENST00000598478 SBNO1A3KN83 1393 aa11.54□□□□□ -0.56
LINC00343-206ENST00000598478 ZBTB7AO95365 584 aa11.53□□□□□ -0.56
LINC00343-206ENST00000598478 WNT7BP56706 349 aa11.53□□□□□ -0.56
LINC00343-206ENST00000598478 SKOR1P84550 965 aa11.53□□□□□ -0.56
LINC00343-206ENST00000598478 RC3H1Q5TC82 1133 aaKnown RBP11.53□□□□□ -0.56
LINC00343-206ENST00000598478 TREML4Q6UXN2 200 aa11.53□□□□□ -0.56
LINC00343-206ENST00000598478 RETREG3Q86VR2 466 aa11.53□□□□□ -0.56
LINC00343-206ENST00000598478 SPATA31A1Q5TZJ5 1347 aa11.53□□□□□ -0.56
LINC00343-206ENST00000598478 IFT172Q9UG01 1749 aa11.52□□□□□ -0.56
LINC00343-206ENST00000598478 PPLO60437 1756 aa11.52□□□□□ -0.57
LINC00343-206ENST00000598478 LOC105371045A0A1W2PR82 267 aa11.52□□□□□ -0.57
LINC00343-206ENST00000598478 GIGYF1O75420 1035 aaPredicted RBP11.52□□□□□ -0.57
LINC00343-206ENST00000598478 NRXN1Q9ULB1 1477 aa11.51□□□□□ -0.57
LINC00343-206ENST00000598478 FDX1P10109 184 aa11.51□□□□□ -0.57
LINC00343-206ENST00000598478 FHDC1Q9C0D6 1143 aaPredicted RBP11.51□□□□□ -0.57
LINC00343-206ENST00000598478 USP35Q9P2H5 1018 aa11.51□□□□□ -0.57
LINC00343-206ENST00000598478 TMEM132EQ6IEE7 984 aa11.5□□□□□ -0.57
LINC00343-206ENST00000598478 PMFBP1Q8TBY8 1022 aa11.5□□□□□ -0.57
LINC00343-206ENST00000598478 SYT17Q9BSW7 474 aa11.5□□□□□ -0.57
LINC00343-206ENST00000598478 ROCK1Q13464 1354 aa11.5□□□□□ -0.57
LINC00343-206ENST00000598478 TECPR2O15040 1411 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms