RNA–Protein interactions for RNA: ENST00000598256.1

LTBP4-222, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-222ENST00000598256 EIF2S2P20042 333 aaKnown RBP20.47■□□□□ 0.87
LTBP4-222ENST00000598256 DNAJC10Q8IXB1 793 aa20.47■□□□□ 0.87
LTBP4-222ENST00000598256 SLC4A9Q96Q91 983 aa20.47■□□□□ 0.87
LTBP4-222ENST00000598256 TEX13AQ9BXU3 409 aaPredicted RBP20.47■□□□□ 0.87
LTBP4-222ENST00000598256 CCNL1Q9UK58 526 aaPredicted RBP20.47■□□□□ 0.87
LTBP4-222ENST00000598256 NUP188Q5SRE5 1749 aa20.47■□□□□ 0.87
LTBP4-222ENST00000598256 NECTIN2Q92692 538 aa20.46■□□□□ 0.87
LTBP4-222ENST00000598256 ZNF428Q96B54 188 aa20.46■□□□□ 0.87
LTBP4-222ENST00000598256 CHMP4AQ9BY43 222 aa20.46■□□□□ 0.87
LTBP4-222ENST00000598256 PLSCR1O15162 318 aa20.45■□□□□ 0.86
LTBP4-222ENST00000598256 CCDC30Q5VVM6 783 aa20.45■□□□□ 0.86
LTBP4-222ENST00000598256 ITPK1Q13572 414 aa20.44■□□□□ 0.86
LTBP4-222ENST00000598256 NBPF14Q5TI25 921 aa20.44■□□□□ 0.86
LTBP4-222ENST00000598256 STK31Q9BXU1 1019 aa20.44■□□□□ 0.86
LTBP4-222ENST00000598256 RCAN3Q9UKA8 241 aa20.44■□□□□ 0.86
LTBP4-222ENST00000598256 USP16Q9Y5T5 823 aa20.44■□□□□ 0.86
LTBP4-222ENST00000598256 TCERG1O14776 1098 aaKnown RBP20.43■□□□□ 0.86
LTBP4-222ENST00000598256 STARD3NLO95772 234 aa20.43■□□□□ 0.86
LTBP4-222ENST00000598256 KCNQ4P56696 695 aa20.43■□□□□ 0.86
LTBP4-222ENST00000598256 SLC27A3Q5K4L6 730 aa20.43■□□□□ 0.86
LTBP4-222ENST00000598256 SPON1Q9HCB6 807 aa20.43■□□□□ 0.86
LTBP4-222ENST00000598256 UBR3Q6ZT12 1888 aa20.43■□□□□ 0.86
LTBP4-222ENST00000598256 TUBGCP6Q96RT7 1819 aa20.42■□□□□ 0.86
LTBP4-222ENST00000598256 TXNRD1Q16881 649 aa20.42■□□□□ 0.86
LTBP4-222ENST00000598256 BCL2L13Q9BXK5 485 aa20.42■□□□□ 0.86
LTBP4-222ENST00000598256 SMC4Q9NTJ3 1288 aa20.42■□□□□ 0.86
LTBP4-222ENST00000598256 ALDH1L2Q3SY69 923 aa20.41■□□□□ 0.86
LTBP4-222ENST00000598256 ERBB4Q15303 1308 aa20.41■□□□□ 0.86
LTBP4-222ENST00000598256 CYP19A1P11511 503 aaPredicted RBP20.4■□□□□ 0.86
LTBP4-222ENST00000598256 RARSP54136 660 aaKnown RBP20.4■□□□□ 0.86
LTBP4-222ENST00000598256 SSH1Q8WYL5 1049 aa20.4■□□□□ 0.86
LTBP4-222ENST00000598256 CHPF2Q9P2E5 772 aa20.4■□□□□ 0.86
LTBP4-222ENST00000598256 DBF4Q9UBU7 674 aaPredicted RBP20.4■□□□□ 0.86
LTBP4-222ENST00000598256 LINC00116Q8NCU8 138 aa20.39■□□□□ 0.85
LTBP4-222ENST00000598256 PPP1R1BQ9UD71 204 aaPredicted RBP20.39■□□□□ 0.85
LTBP4-222ENST00000598256 ARFGEF2Q9Y6D5 1785 aa20.39■□□□□ 0.85
LTBP4-222ENST00000598256 C4AP0C0L4 1744 aa20.39■□□□□ 0.85
LTBP4-222ENST00000598256 CNTNAP4Q9C0A0 1308 aa20.38■□□□□ 0.85
LTBP4-222ENST00000598256 HMGB2P26583 209 aaKnown RBP20.38■□□□□ 0.85
LTBP4-222ENST00000598256 CRKLP46109 303 aaKnown RBP20.38■□□□□ 0.85
LTBP4-222ENST00000598256 LRRC4BQ9NT99 713 aa20.38■□□□□ 0.85
LTBP4-222ENST00000598256 CCDC87Q9NVE4 849 aa20.38■□□□□ 0.85
LTBP4-222ENST00000598256 BCORQ6W2J9 1755 aa20.37■□□□□ 0.85
LTBP4-222ENST00000598256 A1BGP04217 495 aa20.37■□□□□ 0.85
LTBP4-222ENST00000598256 MYL6BP14649 208 aa20.37■□□□□ 0.85
LTBP4-222ENST00000598256 PIP4K2AP48426 406 aaPredicted RBP20.37■□□□□ 0.85
LTBP4-222ENST00000598256 DDX21Q9NR30 783 aaKnown RBP eCLIP20.37■□□□□ 0.85
LTBP4-222ENST00000598256 ZBTB1Q9Y2K1 713 aa20.37■□□□□ 0.85
LTBP4-222ENST00000598256 QSER1Q2KHR3 1735 aa20.36■□□□□ 0.85
LTBP4-222ENST00000598256 KIF16BQ96L93 1317 aa20.36■□□□□ 0.85
LTBP4-222ENST00000598256 BCAR3O75815 825 aa20.36■□□□□ 0.85
LTBP4-222ENST00000598256 ANXA1P04083 346 aa20.36■□□□□ 0.85
LTBP4-222ENST00000598256 SLC4A2P04920 1241 aa20.36■□□□□ 0.85
LTBP4-222ENST00000598256 CANXP27824 592 aaKnown RBP20.36■□□□□ 0.85
LTBP4-222ENST00000598256 ZNF330Q9Y3S2 320 aaPredicted RBP20.36■□□□□ 0.85
LTBP4-222ENST00000598256 PROSER3Q2NL68 480 aa20.35■□□□□ 0.85
LTBP4-222ENST00000598256 PROM2Q8N271 834 aa20.35■□□□□ 0.85
LTBP4-222ENST00000598256 MRPL50Q8N5N7 158 aaKnown RBP20.35■□□□□ 0.85
LTBP4-222ENST00000598256 HYPKQ9NX55 129 aa20.35■□□□□ 0.85
LTBP4-222ENST00000598256 N4BP2Q86UW6 1770 aaPredicted RBP20.35■□□□□ 0.85
LTBP4-222ENST00000598256 ANKRD36CQ5JPF3 1778 aa20.34■□□□□ 0.85
LTBP4-222ENST00000598256 NBPF26B4DH59 902 aa20.34■□□□□ 0.85
LTBP4-222ENST00000598256 PDIA6Q15084 440 aa20.34■□□□□ 0.85
LTBP4-222ENST00000598256 NBPF10Q6P3W6 841 aaKnown RBP20.34■□□□□ 0.85
LTBP4-222ENST00000598256 NPM2Q86SE8 214 aaKnown RBP20.34■□□□□ 0.85
LTBP4-222ENST00000598256 NBPF15Q8N660 670 aa20.34■□□□□ 0.85
LTBP4-222ENST00000598256 AK7Q96M32 723 aa20.34■□□□□ 0.85
LTBP4-222ENST00000598256 ANO8Q9HCE9 1232 aaPredicted RBP20.34■□□□□ 0.85
LTBP4-222ENST00000598256 SCN7AQ01118 1682 aa20.34■□□□□ 0.85
LTBP4-222ENST00000598256 NUP98P52948 1817 aa20.33■□□□□ 0.85
LTBP4-222ENST00000598256 AFDNP55196 1824 aaKnown RBP20.33■□□□□ 0.85
LTBP4-222ENST00000598256 RC3H1Q5TC82 1133 aaKnown RBP20.33■□□□□ 0.85
LTBP4-222ENST00000598256 INTS5Q6P9B9 1019 aaKnown RBP20.33■□□□□ 0.85
LTBP4-222ENST00000598256 PDGFDQ9GZP0 370 aaPredicted RBP20.33■□□□□ 0.85
LTBP4-222ENST00000598256 GNPATO15228 680 aa20.32■□□□□ 0.84
LTBP4-222ENST00000598256 FRAT1Q92837 279 aaPredicted RBP20.32■□□□□ 0.84
LTBP4-222ENST00000598256 COL15A1P39059 1388 aa20.32■□□□□ 0.84
LTBP4-222ENST00000598256 DCAF8L1A6NGE4 600 aa20.31■□□□□ 0.84
LTBP4-222ENST00000598256 IL6STP40189 918 aaPredicted RBP20.31■□□□□ 0.84
LTBP4-222ENST00000598256 BRPF1P55201 1214 aaPredicted RBP20.31■□□□□ 0.84
LTBP4-222ENST00000598256 FLIIQ13045 1269 aa20.31■□□□□ 0.84
LTBP4-222ENST00000598256 G2E3Q7L622 706 aa20.31■□□□□ 0.84
LTBP4-222ENST00000598256 PHAXQ9H814 394 aaKnown RBP20.31■□□□□ 0.84
LTBP4-222ENST00000598256 AIMP1Q12904 312 aaKnown RBP20.3■□□□□ 0.84
LTBP4-222ENST00000598256 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.3■□□□□ 0.84
LTBP4-222ENST00000598256 ZNF784Q8NCA9 323 aaPredicted RBP20.3■□□□□ 0.84
LTBP4-222ENST00000598256 RTCBQ9Y3I0 505 aaKnown RBP20.3■□□□□ 0.84
LTBP4-222ENST00000598256 PTPRCP08575 1304 aa20.29■□□□□ 0.84
LTBP4-222ENST00000598256 FKBP5Q13451 457 aaPredicted RBP20.29■□□□□ 0.84
LTBP4-222ENST00000598256 LRP10Q7Z4F1 713 aa20.29■□□□□ 0.84
LTBP4-222ENST00000598256 XAGE3Q8WTP9 111 aa20.29■□□□□ 0.84
LTBP4-222ENST00000598256 NOB1Q9ULX3 412 aaKnown RBP20.29■□□□□ 0.84
LTBP4-222ENST00000598256 SUPT16HQ9Y5B9 1047 aaKnown RBP20.29■□□□□ 0.84
LTBP4-222ENST00000598256 IPO8O15397 1037 aaKnown RBP20.28■□□□□ 0.84
LTBP4-222ENST00000598256 RPS6KA4O75676 772 aa20.28■□□□□ 0.84
LTBP4-222ENST00000598256 DDX58O95786 925 aaKnown RBP20.28■□□□□ 0.84
LTBP4-222ENST00000598256 PTGER2P43116 358 aa20.28■□□□□ 0.84
LTBP4-222ENST00000598256 ZKSCAN2Q63HK3 967 aa20.28■□□□□ 0.84
LTBP4-222ENST00000598256 COPS6Q7L5N1 327 aa20.28■□□□□ 0.84
LTBP4-222ENST00000598256 ARXQ96QS3 562 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms