RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 C4AP0C0L4 1744 aa20.73■□□□□ 0.91
PPFIA4-208ENST00000597023 COL15A1P39059 1388 aa20.72■□□□□ 0.91
PPFIA4-208ENST00000597023 STARD3NLO95772 234 aa20.72■□□□□ 0.91
PPFIA4-208ENST00000597023 FMNL2Q96PY5 1086 aa20.72■□□□□ 0.91
PPFIA4-208ENST00000597023 ZNF330Q9Y3S2 320 aaPredicted RBP20.72■□□□□ 0.91
PPFIA4-208ENST00000597023 CHD4Q14839 1912 aa20.71■□□□□ 0.91
PPFIA4-208ENST00000597023 PXDNLA1KZ92 1463 aa20.71■□□□□ 0.91
PPFIA4-208ENST00000597023 TM4SF1P30408 202 aa20.71■□□□□ 0.91
PPFIA4-208ENST00000597023 TGFB2P61812 414 aa20.71■□□□□ 0.91
PPFIA4-208ENST00000597023 NARFQ9UHQ1 456 aa20.71■□□□□ 0.91
PPFIA4-208ENST00000597023 C10orf71Q711Q0 1435 aa20.7■□□□□ 0.9
PPFIA4-208ENST00000597023 PRAMEF22A3QJZ6 481 aa20.7■□□□□ 0.9
PPFIA4-208ENST00000597023 POLRMTO00411 1230 aaKnown RBP20.7■□□□□ 0.9
PPFIA4-208ENST00000597023 A1BGP04217 495 aa20.7■□□□□ 0.9
PPFIA4-208ENST00000597023 BCL2L12Q9HB09 334 aa20.7■□□□□ 0.9
PPFIA4-208ENST00000597023 BCS1LQ9Y276 419 aa20.7■□□□□ 0.9
PPFIA4-208ENST00000597023 NFIXQ14938 502 aa20.69■□□□□ 0.9
PPFIA4-208ENST00000597023 MIS18AQ9NYP9 233 aa20.69■□□□□ 0.9
PPFIA4-208ENST00000597023 PIP4K2AP48426 406 aaPredicted RBP20.68■□□□□ 0.9
PPFIA4-208ENST00000597023 EIF5P55010 431 aaKnown RBP20.68■□□□□ 0.9
PPFIA4-208ENST00000597023 BICDL1Q6ZP65 573 aa20.68■□□□□ 0.9
PPFIA4-208ENST00000597023 PLEKHF1Q96S99 279 aa20.68■□□□□ 0.9
PPFIA4-208ENST00000597023 TEX13AQ9BXU3 409 aaPredicted RBP20.68■□□□□ 0.9
PPFIA4-208ENST00000597023 TBC1D2BQ9UPU7 963 aa20.68■□□□□ 0.9
PPFIA4-208ENST00000597023 USP16Q9Y5T5 823 aa20.68■□□□□ 0.9
PPFIA4-208ENST00000597023 UBR2Q8IWV8 1755 aa20.67■□□□□ 0.9
PPFIA4-208ENST00000597023 NEFMP07197 916 aa20.67■□□□□ 0.9
PPFIA4-208ENST00000597023 RALBP1Q15311 655 aa20.67■□□□□ 0.9
PPFIA4-208ENST00000597023 HTATSF1O43719 755 aaKnown RBP20.66■□□□□ 0.9
PPFIA4-208ENST00000597023 KCNA3P22001 575 aa20.66■□□□□ 0.9
PPFIA4-208ENST00000597023 CHRNA5P30532 468 aa20.66■□□□□ 0.9
PPFIA4-208ENST00000597023 SIPA1L3O60292 1781 aaPredicted RBP20.65■□□□□ 0.9
PPFIA4-208ENST00000597023 THUMPD2Q9BTF0 503 aaKnown RBP20.65■□□□□ 0.9
PPFIA4-208ENST00000597023 N4BP2Q86UW6 1770 aaPredicted RBP20.64■□□□□ 0.9
PPFIA4-208ENST00000597023 A0A087WZG4 1122 aa20.64■□□□□ 0.89
PPFIA4-208ENST00000597023 SERPINB2P05120 415 aa20.64■□□□□ 0.89
PPFIA4-208ENST00000597023 TAF7Q15545 349 aaPredicted RBP20.64■□□□□ 0.89
PPFIA4-208ENST00000597023 IL6STP40189 918 aaPredicted RBP20.63■□□□□ 0.89
PPFIA4-208ENST00000597023 NFE2L2Q16236 605 aa20.63■□□□□ 0.89
PPFIA4-208ENST00000597023 KIAA1551Q9HCM1 1747 aa20.62■□□□□ 0.89
PPFIA4-208ENST00000597023 SNRPA1P09661 255 aaKnown RBP20.62■□□□□ 0.89
PPFIA4-208ENST00000597023 TBC1D9BQ66K14 1250 aa20.62■□□□□ 0.89
PPFIA4-208ENST00000597023 ARHGAP27Q6ZUM4 889 aa20.62■□□□□ 0.89
PPFIA4-208ENST00000597023 ZNF526Q8TF50 670 aaPredicted RBP20.62■□□□□ 0.89
PPFIA4-208ENST00000597023 KIF13BQ9NQT8 1826 aa20.62■□□□□ 0.89
PPFIA4-208ENST00000597023 MAPK8IP3Q9UPT6 1336 aa20.61■□□□□ 0.89
PPFIA4-208ENST00000597023 NPM2Q86SE8 214 aaKnown RBP20.61■□□□□ 0.89
PPFIA4-208ENST00000597023 PIM2Q9P1W9 311 aa20.61■□□□□ 0.89
PPFIA4-208ENST00000597023 ATP10DQ9P241 1426 aa20.61■□□□□ 0.89
PPFIA4-208ENST00000597023 CCDC24Q8N4L8 307 aa20.6■□□□□ 0.89
PPFIA4-208ENST00000597023 MYBBP1AQ9BQG0 1328 aaKnown RBP20.59■□□□□ 0.89
PPFIA4-208ENST00000597023 PNNQ9H307 717 aaKnown RBP20.59■□□□□ 0.89
PPFIA4-208ENST00000597023 GIGYF1O75420 1035 aaPredicted RBP20.58■□□□□ 0.89
PPFIA4-208ENST00000597023 CAMTA2O94983 1202 aa20.58■□□□□ 0.89
PPFIA4-208ENST00000597023 DALRD3Q5D0E6 543 aaKnown RBP20.58■□□□□ 0.89
PPFIA4-208ENST00000597023 DZIP3Q86Y13 1208 aaKnown RBP20.58■□□□□ 0.89
PPFIA4-208ENST00000597023 CCDC146Q8IYE0 955 aa20.58■□□□□ 0.89
PPFIA4-208ENST00000597023 NBPF26B4DH59 902 aa20.56■□□□□ 0.88
PPFIA4-208ENST00000597023 RIPK4P57078 832 aa20.56■□□□□ 0.88
PPFIA4-208ENST00000597023 C1QTNF8P60827 252 aa20.56■□□□□ 0.88
PPFIA4-208ENST00000597023 NBPF10Q6P3W6 841 aaKnown RBP20.56■□□□□ 0.88
PPFIA4-208ENST00000597023 NBPF15Q8N660 670 aa20.56■□□□□ 0.88
PPFIA4-208ENST00000597023 RRP7AQ9Y3A4 280 aaKnown RBP20.56■□□□□ 0.88
PPFIA4-208ENST00000597023 CARMIL3Q8ND23 1372 aa20.56■□□□□ 0.88
PPFIA4-208ENST00000597023 PNISRQ8TF01 805 aaKnown RBP20.55■□□□□ 0.88
PPFIA4-208ENST00000597023 GPBP1L1Q9HC44 474 aaPredicted RBP20.55■□□□□ 0.88
PPFIA4-208ENST00000597023 ADCY9O60503 1353 aa20.55■□□□□ 0.88
PPFIA4-208ENST00000597023 EIF4A1P60842 406 aaKnown RBP20.54■□□□□ 0.88
PPFIA4-208ENST00000597023 NEUROD2Q15784 382 aa20.54■□□□□ 0.88
PPFIA4-208ENST00000597023 C2CD5Q86YS7 1000 aa20.54■□□□□ 0.88
PPFIA4-208ENST00000597023 NGEFQ8N5V2 710 aa20.54■□□□□ 0.88
PPFIA4-208ENST00000597023 SETDB2Q96T68 719 aa20.53■□□□□ 0.88
PPFIA4-208ENST00000597023 TMPOP42166 694 aaKnown RBP20.52■□□□□ 0.88
PPFIA4-208ENST00000597023 PRR5LQ6MZQ0 368 aa20.52■□□□□ 0.88
PPFIA4-208ENST00000597023 AFDNP55196 1824 aaKnown RBP20.52■□□□□ 0.88
PPFIA4-208ENST00000597023 DLG5Q8TDM6 1919 aa20.51■□□□□ 0.87
PPFIA4-208ENST00000597023 NPHP1O15259 732 aa20.51■□□□□ 0.87
PPFIA4-208ENST00000597023 PRKRIP1Q9H875 184 aaPredicted RBP20.51■□□□□ 0.87
PPFIA4-208ENST00000597023 H0YIN7 160 aa20.5■□□□□ 0.87
PPFIA4-208ENST00000597023 WDR43Q15061 677 aaKnown RBP eCLIP20.5■□□□□ 0.87
PPFIA4-208ENST00000597023 C9orf131Q5VYM1 1079 aa20.5■□□□□ 0.87
PPFIA4-208ENST00000597023 TSPYL4Q9UJ04 414 aa20.5■□□□□ 0.87
PPFIA4-208ENST00000597023 ADAMTS8Q9UP79 889 aa20.5■□□□□ 0.87
PPFIA4-208ENST00000597023 FAM177BA6PVY3 158 aa20.49■□□□□ 0.87
PPFIA4-208ENST00000597023 ZNF622Q969S3 477 aaKnown RBP eCLIP20.49■□□□□ 0.871e-8■□□□□ 8.5
PPFIA4-208ENST00000597023 NRXN2Q9P2S2 1712 aa20.49■□□□□ 0.87
PPFIA4-208ENST00000597023 BRCA1P38398 1863 aaKnown RBP20.48■□□□□ 0.87
PPFIA4-208ENST00000597023 SENP3-EIF4A1A0A087X0R7 540 aa20.48■□□□□ 0.87
PPFIA4-208ENST00000597023 MYL6BP14649 208 aa20.48■□□□□ 0.87
PPFIA4-208ENST00000597023 RASSF7Q02833 373 aa20.48■□□□□ 0.87
PPFIA4-208ENST00000597023 HLFQ16534 295 aa20.48■□□□□ 0.87
PPFIA4-208ENST00000597023 TTLL6Q8N841 843 aa20.48■□□□□ 0.87
PPFIA4-208ENST00000597023 CNBD1Q8NA66 436 aa20.48■□□□□ 0.87
PPFIA4-208ENST00000597023 BRIP1Q9BX63 1249 aa20.48■□□□□ 0.87
PPFIA4-208ENST00000597023 ZNF219Q9P2Y4 722 aaPredicted RBP20.48■□□□□ 0.87
PPFIA4-208ENST00000597023 SCN7AQ01118 1682 aa20.48■□□□□ 0.87
PPFIA4-208ENST00000597023 ZEB1P37275 1124 aaPredicted RBP20.47■□□□□ 0.87
PPFIA4-208ENST00000597023 PDE6BP35913 854 aa20.46■□□□□ 0.87
PPFIA4-208ENST00000597023 CLEC4GQ6UXB4 293 aa20.46■□□□□ 0.87
PPFIA4-208ENST00000597023 NBPF5PQ86XG9 351 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms