RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 C8orf58Q8NAV2 365 aa19.38■□□□□ 0.69
DDX49-204ENST00000595858 CICQ96RK0 1608 aaPredicted RBP19.38■□□□□ 0.69
DDX49-204ENST00000595858 C5P01031 1676 aa19.37■□□□□ 0.69
DDX49-204ENST00000595858 STK32BQ9NY57 414 aa19.37■□□□□ 0.69
DDX49-204ENST00000595858 CNTNAP4Q9C0A0 1308 aa19.37■□□□□ 0.69
DDX49-204ENST00000595858 ELL2O00472 640 aaPredicted RBP19.37■□□□□ 0.69
DDX49-204ENST00000595858 SLC15A2Q16348 729 aa19.37■□□□□ 0.69
DDX49-204ENST00000595858 INTS5Q6P9B9 1019 aaKnown RBP19.37■□□□□ 0.69
DDX49-204ENST00000595858 TRMT2AQ8IZ69 625 aaKnown RBP19.37■□□□□ 0.69
DDX49-204ENST00000595858 AK7Q96M32 723 aa19.37■□□□□ 0.69
DDX49-204ENST00000595858 A1BGP04217 495 aa19.36■□□□□ 0.69
DDX49-204ENST00000595858 HOXB7P09629 217 aa19.36■□□□□ 0.69
DDX49-204ENST00000595858 TSPYL6Q8N831 410 aa19.36■□□□□ 0.69
DDX49-204ENST00000595858 EXOSC9Q06265 439 aaKnown RBP19.35■□□□□ 0.69
DDX49-204ENST00000595858 CCDC87Q9NVE4 849 aa19.35■□□□□ 0.69
DDX49-204ENST00000595858 TFCP2L1Q9NZI6 479 aa19.35■□□□□ 0.69
DDX49-204ENST00000595858 C4BP0C0L5 1744 aa19.35■□□□□ 0.69
DDX49-204ENST00000595858 COL5A3P25940 1745 aaPredicted RBP19.35■□□□□ 0.69
DDX49-204ENST00000595858 GNPATO15228 680 aa19.34■□□□□ 0.69
DDX49-204ENST00000595858 EIF2S2P20042 333 aaKnown RBP19.34■□□□□ 0.69
DDX49-204ENST00000595858 YTHDC1Q96MU7 727 aaKnown RBP19.34■□□□□ 0.69
DDX49-204ENST00000595858 ZBTB1Q9Y2K1 713 aa19.34■□□□□ 0.69
DDX49-204ENST00000595858 MYH14Q7Z406 1995 aaKnown RBP19.33■□□□□ 0.69
DDX49-204ENST00000595858 RPS6KA4O75676 772 aa19.33■□□□□ 0.69
DDX49-204ENST00000595858 CANXP27824 592 aaKnown RBP19.33■□□□□ 0.68
DDX49-204ENST00000595858 TWISTNBQ3B726 338 aaPredicted RBP19.33■□□□□ 0.68
DDX49-204ENST00000595858 AMIGO3Q86WK7 504 aa19.33■□□□□ 0.68
DDX49-204ENST00000595858 SOS1Q07889 1333 aaPredicted RBP19.32■□□□□ 0.68
DDX49-204ENST00000595858 NECTIN2Q92692 538 aa19.32■□□□□ 0.68
DDX49-204ENST00000595858 RTCBQ9Y3I0 505 aaKnown RBP19.32■□□□□ 0.68
DDX49-204ENST00000595858 R3HDM1Q15032 1099 aaKnown RBP19.31■□□□□ 0.68
DDX49-204ENST00000595858 HDGFL1Q5TGJ6 251 aa19.31■□□□□ 0.68
DDX49-204ENST00000595858 SMIM5Q71RC9 77 aa19.31■□□□□ 0.68
DDX49-204ENST00000595858 VAMP4O75379 141 aa19.31■□□□□ 0.68
DDX49-204ENST00000595858 PIP4K2AP48426 406 aaPredicted RBP19.31■□□□□ 0.68
DDX49-204ENST00000595858 NBPF26B4DH59 902 aa19.3■□□□□ 0.68
DDX49-204ENST00000595858 NBPF10Q6P3W6 841 aaKnown RBP19.3■□□□□ 0.68
DDX49-204ENST00000595858 NBPF15Q8N660 670 aa19.3■□□□□ 0.68
DDX49-204ENST00000595858 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.29■□□□□ 0.68
DDX49-204ENST00000595858 PHF14O94880 888 aa19.29■□□□□ 0.68
DDX49-204ENST00000595858 SSFA2P28290 1259 aa19.29■□□□□ 0.68
DDX49-204ENST00000595858 ERBB4Q15303 1308 aa19.29■□□□□ 0.68
DDX49-204ENST00000595858 PNPLA7Q6ZV29 1317 aa19.29■□□□□ 0.68
DDX49-204ENST00000595858 IL6STP40189 918 aaPredicted RBP19.28■□□□□ 0.68
DDX49-204ENST00000595858 EIF5P55010 431 aaKnown RBP19.28■□□□□ 0.68
DDX49-204ENST00000595858 PDIA6Q15084 440 aa19.28■□□□□ 0.68
DDX49-204ENST00000595858 CHMP4AQ9BY43 222 aa19.28■□□□□ 0.68
DDX49-204ENST00000595858 LAMB4A4D0S4 1761 aa19.28■□□□□ 0.68
DDX49-204ENST00000595858 PSDA5PKW4 1024 aaPredicted RBP19.28■□□□□ 0.68
DDX49-204ENST00000595858 TRAPPC3LQ5T215 181 aa19.28■□□□□ 0.68
DDX49-204ENST00000595858 FLAD1Q8NFF5 587 aa19.28■□□□□ 0.68
DDX49-204ENST00000595858 ADRA2BP18089 450 aa19.27■□□□□ 0.68
DDX49-204ENST00000595858 CCDC30Q5VVM6 783 aa19.27■□□□□ 0.68
DDX49-204ENST00000595858 COL23A1Q86Y22 540 aaPredicted RBP19.27■□□□□ 0.68
DDX49-204ENST00000595858 ARHGEF1Q92888 912 aaKnown RBP19.27■□□□□ 0.68
DDX49-204ENST00000595858 UBR3Q6ZT12 1888 aa19.27■□□□□ 0.68
DDX49-204ENST00000595858 MYL6BP14649 208 aa19.26■□□□□ 0.67
DDX49-204ENST00000595858 DDX21Q9NR30 783 aaKnown RBP eCLIP19.26■□□□□ 0.67
DDX49-204ENST00000595858 CHPF2Q9P2E5 772 aa19.26■□□□□ 0.67
DDX49-204ENST00000595858 ZNF330Q9Y3S2 320 aaPredicted RBP19.26■□□□□ 0.67
DDX49-204ENST00000595858 ANXA1P04083 346 aa19.26■□□□□ 0.67
DDX49-204ENST00000595858 PROSER3Q2NL68 480 aa19.26■□□□□ 0.67
DDX49-204ENST00000595858 PDGFDQ9GZP0 370 aaPredicted RBP19.26■□□□□ 0.67
DDX49-204ENST00000595858 DBF4Q9UBU7 674 aaPredicted RBP19.26■□□□□ 0.67
DDX49-204ENST00000595858 NPM2Q86SE8 214 aaKnown RBP19.25■□□□□ 0.67
DDX49-204ENST00000595858 TUBGCP6Q96RT7 1819 aa19.25■□□□□ 0.67
DDX49-204ENST00000595858 COL15A1P39059 1388 aa19.24■□□□□ 0.67
DDX49-204ENST00000595858 MSH5O43196 834 aa19.24■□□□□ 0.67
DDX49-204ENST00000595858 LRP10Q7Z4F1 713 aa19.24■□□□□ 0.67
DDX49-204ENST00000595858 TCERG1O14776 1098 aaKnown RBP19.24■□□□□ 0.67
DDX49-204ENST00000595858 RFC4P35249 363 aa19.24■□□□□ 0.67
DDX49-204ENST00000595858 A0A087WZG4 1122 aa19.23■□□□□ 0.67
DDX49-204ENST00000595858 CT47B1P0C2W7 299 aaPredicted RBP19.22■□□□□ 0.67
DDX49-204ENST00000595858 STK31Q9BXU1 1019 aa19.22■□□□□ 0.67
DDX49-204ENST00000595858 QSER1Q2KHR3 1735 aa19.22■□□□□ 0.67
DDX49-204ENST00000595858 ARXQ96QS3 562 aa19.22■□□□□ 0.67
DDX49-204ENST00000595858 HYPKQ9NX55 129 aa19.22■□□□□ 0.67
DDX49-204ENST00000595858 TBC1D2BQ9UPU7 963 aa19.22■□□□□ 0.67
DDX49-204ENST00000595858 DZIP3Q86Y13 1208 aaKnown RBP19.21■□□□□ 0.67
DDX49-204ENST00000595858 ZNF428Q96B54 188 aa19.21■□□□□ 0.67
DDX49-204ENST00000595858 SLC4A2P04920 1241 aa19.2■□□□□ 0.66
DDX49-204ENST00000595858 SRP68Q9UHB9 627 aaKnown RBP19.2■□□□□ 0.66
DDX49-204ENST00000595858 NARFQ9UHQ1 456 aa19.2■□□□□ 0.66
DDX49-204ENST00000595858 ZPR1O75312 459 aa19.2■□□□□ 0.66
DDX49-204ENST00000595858 TTLL7Q6ZT98 887 aa19.2■□□□□ 0.66
DDX49-204ENST00000595858 COPS6Q7L5N1 327 aa19.2■□□□□ 0.66
DDX49-204ENST00000595858 SLC16A10Q8TF71 515 aa19.2■□□□□ 0.66
DDX49-204ENST00000595858 XAGE3Q8WTP9 111 aa19.2■□□□□ 0.66
DDX49-204ENST00000595858 USP42Q9H9J4 1324 aaKnown RBP19.19■□□□□ 0.66
DDX49-204ENST00000595858 AIMP1Q12904 312 aaKnown RBP19.19■□□□□ 0.66
DDX49-204ENST00000595858 PHAXQ9H814 394 aaKnown RBP19.19■□□□□ 0.66
DDX49-204ENST00000595858 USPL1Q5W0Q7 1092 aa19.18■□□□□ 0.66
DDX49-204ENST00000595858 CAMTA2O94983 1202 aa19.18■□□□□ 0.66
DDX49-204ENST00000595858 GYS1P13807 737 aa19.17■□□□□ 0.66
DDX49-204ENST00000595858 SSH1Q8WYL5 1049 aa19.17■□□□□ 0.66
DDX49-204ENST00000595858 ZBTB7AO95365 584 aa19.16■□□□□ 0.66
DDX49-204ENST00000595858 ALDH1L2Q3SY69 923 aa19.16■□□□□ 0.66
DDX49-204ENST00000595858 KIF6Q6ZMV9 814 aa19.16■□□□□ 0.66
DDX49-204ENST00000595858 G2E3Q7L622 706 aa19.16■□□□□ 0.66
DDX49-204ENST00000595858 BCL2L12Q9HB09 334 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms