RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 COL15A1P39059 1388 aa20.87■□□□□ 0.93
ZNF550-207ENST00000595560 KCNQ3O43525 872 aa20.87■□□□□ 0.93
ZNF550-207ENST00000595560 MMP10P09238 476 aa20.87■□□□□ 0.93
ZNF550-207ENST00000595560 TAF7Q15545 349 aaPredicted RBP20.87■□□□□ 0.93
ZNF550-207ENST00000595560 WDR43Q15061 677 aaKnown RBP eCLIP20.86■□□□□ 0.93
ZNF550-207ENST00000595560 UTRNP46939 3433 aa20.86■□□□□ 0.93
ZNF550-207ENST00000595560 GOLGB1Q14789 3259 aaKnown RBP20.86■□□□□ 0.93
ZNF550-207ENST00000595560 LAMB4A4D0S4 1761 aa20.85■□□□□ 0.93
ZNF550-207ENST00000595560 SRP68Q9UHB9 627 aaKnown RBP20.85■□□□□ 0.93
ZNF550-207ENST00000595560 CHD4Q14839 1912 aa20.84■□□□□ 0.93
ZNF550-207ENST00000595560 SCN7AQ01118 1682 aa20.83■□□□□ 0.93
ZNF550-207ENST00000595560 CANXP27824 592 aaKnown RBP20.83■□□□□ 0.93
ZNF550-207ENST00000595560 PNISRQ8TF01 805 aaKnown RBP20.83■□□□□ 0.93
ZNF550-207ENST00000595560 KIAA1551Q9HCM1 1747 aa20.82■□□□□ 0.92
ZNF550-207ENST00000595560 C10orf71Q711Q0 1435 aa20.82■□□□□ 0.92
ZNF550-207ENST00000595560 ZPR1O75312 459 aa20.82■□□□□ 0.92
ZNF550-207ENST00000595560 TMPOP42166 694 aaKnown RBP20.82■□□□□ 0.92
ZNF550-207ENST00000595560 EIF5P55010 431 aaKnown RBP20.82■□□□□ 0.92
ZNF550-207ENST00000595560 FKBP8Q14318 412 aa20.82■□□□□ 0.92
ZNF550-207ENST00000595560 NARFQ9UHQ1 456 aa20.82■□□□□ 0.92
ZNF550-207ENST00000595560 SNRPA1P09661 255 aaKnown RBP20.81■□□□□ 0.92
ZNF550-207ENST00000595560 RIPK4P57078 832 aa20.81■□□□□ 0.92
ZNF550-207ENST00000595560 RUNDC1Q96C34 613 aa20.81■□□□□ 0.92
ZNF550-207ENST00000595560 THUMPD2Q9BTF0 503 aaKnown RBP20.81■□□□□ 0.92
ZNF550-207ENST00000595560 ADAMTS8Q9UP79 889 aa20.81■□□□□ 0.92
ZNF550-207ENST00000595560 IL6STP40189 918 aaPredicted RBP20.8■□□□□ 0.92
ZNF550-207ENST00000595560 LMOD3Q0VAK6 560 aa20.8■□□□□ 0.92
ZNF550-207ENST00000595560 GPR162Q16538 588 aa20.8■□□□□ 0.92
ZNF550-207ENST00000595560 USPL1Q5W0Q7 1092 aa20.8■□□□□ 0.92
ZNF550-207ENST00000595560 CCDC146Q8IYE0 955 aa20.8■□□□□ 0.92
ZNF550-207ENST00000595560 PARP3Q9Y6F1 533 aa20.8■□□□□ 0.92
ZNF550-207ENST00000595560 BCORQ6W2J9 1755 aa20.8■□□□□ 0.92
ZNF550-207ENST00000595560 A0A087WZG4 1122 aa20.79■□□□□ 0.92
ZNF550-207ENST00000595560 MIS18AQ9NYP9 233 aa20.79■□□□□ 0.92
ZNF550-207ENST00000595560 USP16Q9Y5T5 823 aa20.79■□□□□ 0.92
ZNF550-207ENST00000595560 PRAMEF22A3QJZ6 481 aa20.78■□□□□ 0.92
ZNF550-207ENST00000595560 A1BGP04217 495 aa20.78■□□□□ 0.92
ZNF550-207ENST00000595560 AFDNP55196 1824 aaKnown RBP20.78■□□□□ 0.92
ZNF550-207ENST00000595560 NRXN2Q9P2S2 1712 aa20.78■□□□□ 0.92
ZNF550-207ENST00000595560 N4BP2Q86UW6 1770 aaPredicted RBP20.77■□□□□ 0.92
ZNF550-207ENST00000595560 DDR1Q08345 913 aa20.77■□□□□ 0.92
ZNF550-207ENST00000595560 BCL2L12Q9HB09 334 aa20.77■□□□□ 0.92
ZNF550-207ENST00000595560 PXDNLA1KZ92 1463 aa20.76■□□□□ 0.91
ZNF550-207ENST00000595560 TM4SF1P30408 202 aa20.76■□□□□ 0.91
ZNF550-207ENST00000595560 PELP1Q8IZL8 1130 aaKnown RBP20.76■□□□□ 0.91
ZNF550-207ENST00000595560 RRP7AQ9Y3A4 280 aaKnown RBP20.76■□□□□ 0.91
ZNF550-207ENST00000595560 BRCA1P38398 1863 aaKnown RBP20.75■□□□□ 0.91
ZNF550-207ENST00000595560 POLRMTO00411 1230 aaKnown RBP20.75■□□□□ 0.91
ZNF550-207ENST00000595560 YBX3P16989 372 aaKnown RBP eCLIP20.75■□□□□ 0.91
ZNF550-207ENST00000595560 YY1P25490 414 aa20.75■□□□□ 0.91
ZNF550-207ENST00000595560 EIF4A1P60842 406 aaKnown RBP20.74■□□□□ 0.91
ZNF550-207ENST00000595560 TGFB2P61812 414 aa20.74■□□□□ 0.91
ZNF550-207ENST00000595560 BABAM1Q9NWV8 329 aa20.74■□□□□ 0.91
ZNF550-207ENST00000595560 ZNF330Q9Y3S2 320 aaPredicted RBP20.74■□□□□ 0.91
ZNF550-207ENST00000595560 GIGYF1O75420 1035 aaPredicted RBP20.73■□□□□ 0.91
ZNF550-207ENST00000595560 NFIXQ14938 502 aa20.73■□□□□ 0.91
ZNF550-207ENST00000595560 NEUROD2Q15784 382 aa20.73■□□□□ 0.91
ZNF550-207ENST00000595560 NPM2Q86SE8 214 aaKnown RBP20.73■□□□□ 0.91
ZNF550-207ENST00000595560 TSPYL4Q9UJ04 414 aa20.73■□□□□ 0.91
ZNF550-207ENST00000595560 ANP32CO43423 234 aa20.72■□□□□ 0.91
ZNF550-207ENST00000595560 GRIN3BO60391 1043 aa20.72■□□□□ 0.91
ZNF550-207ENST00000595560 TRIM35Q9UPQ4 493 aa20.72■□□□□ 0.91
ZNF550-207ENST00000595560 TBC1D2BQ9UPU7 963 aa20.72■□□□□ 0.91
ZNF550-207ENST00000595560 PIP4K2AP48426 406 aaPredicted RBP20.71■□□□□ 0.91
ZNF550-207ENST00000595560 NBPF26B4DH59 902 aa20.7■□□□□ 0.9
ZNF550-207ENST00000595560 CAMTA2O94983 1202 aa20.7■□□□□ 0.9
ZNF550-207ENST00000595560 CCDC184Q52MB2 194 aa20.7■□□□□ 0.9
ZNF550-207ENST00000595560 NBPF10Q6P3W6 841 aaKnown RBP20.7■□□□□ 0.9
ZNF550-207ENST00000595560 DZIP3Q86Y13 1208 aaKnown RBP20.7■□□□□ 0.9
ZNF550-207ENST00000595560 NBPF15Q8N660 670 aa20.7■□□□□ 0.9
ZNF550-207ENST00000595560 DLEC1Q9Y238 1755 aa20.68■□□□□ 0.9
ZNF550-207ENST00000595560 ARFGEF1Q9Y6D6 1849 aa20.67■□□□□ 0.9
ZNF550-207ENST00000595560 A0A0G2JLW4 131 aa20.67■□□□□ 0.9
ZNF550-207ENST00000595560 SERPINB2P05120 415 aa20.67■□□□□ 0.9
ZNF550-207ENST00000595560 TBC1D9BQ66K14 1250 aa20.67■□□□□ 0.9
ZNF550-207ENST00000595560 CARMIL3Q8ND23 1372 aa20.67■□□□□ 0.9
ZNF550-207ENST00000595560 CHL1O00533 1208 aa20.66■□□□□ 0.9
ZNF550-207ENST00000595560 APAF1O14727 1248 aa20.66■□□□□ 0.9
ZNF550-207ENST00000595560 RGL2O15211 777 aa20.66■□□□□ 0.9
ZNF550-207ENST00000595560 DPEP1P16444 411 aa20.66■□□□□ 0.9
ZNF550-207ENST00000595560 ANKRD31Q8N7Z5 1873 aa20.65■□□□□ 0.9
ZNF550-207ENST00000595560 ERBB4Q15303 1308 aa20.65■□□□□ 0.9
ZNF550-207ENST00000595560 CLEC4GQ6UXB4 293 aa20.65■□□□□ 0.9
ZNF550-207ENST00000595560 BICDL1Q6ZP65 573 aa20.65■□□□□ 0.9
ZNF550-207ENST00000595560 WWC3Q9ULE0 1092 aa20.65■□□□□ 0.9
ZNF550-207ENST00000595560 MRS2Q9HD23 443 aa20.64■□□□□ 0.89
ZNF550-207ENST00000595560 ZNF652Q9Y2D9 606 aa20.64■□□□□ 0.89
ZNF550-207ENST00000595560 NUP98P52948 1817 aa20.63■□□□□ 0.89
ZNF550-207ENST00000595560 KCNA3P22001 575 aa20.63■□□□□ 0.89
ZNF550-207ENST00000595560 CFAP44Q96MT7 982 aa20.62■□□□□ 0.89
ZNF550-207ENST00000595560 SETDB2Q96T68 719 aa20.62■□□□□ 0.89
ZNF550-207ENST00000595560 PIM2Q9P1W9 311 aa20.61■□□□□ 0.89
ZNF550-207ENST00000595560 BCS1LQ9Y276 419 aa20.61■□□□□ 0.89
ZNF550-207ENST00000595560 LAS1LQ9Y4W2 734 aaKnown RBP20.61■□□□□ 0.89
ZNF550-207ENST00000595560 CHRNA5P30532 468 aa20.6■□□□□ 0.89
ZNF550-207ENST00000595560 CALD1Q05682 793 aaKnown RBP20.6■□□□□ 0.89
ZNF550-207ENST00000595560 COL11A2P13942 1736 aaPredicted RBP20.6■□□□□ 0.89
ZNF550-207ENST00000595560 MYL6BP14649 208 aa20.59■□□□□ 0.89
ZNF550-207ENST00000595560 PRR5LQ6MZQ0 368 aa20.59■□□□□ 0.89
ZNF550-207ENST00000595560 MAP3K15Q6ZN16 1313 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms