RNA–Protein interactions for RNA: ENST00000594417.1

ARHGEF1-208, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-208ENST00000594417 PIM2Q9P1W9 311 aa18.48■□□□□ 0.55
ARHGEF1-208ENST00000594417 CICQ96RK0 1608 aaPredicted RBP18.48■□□□□ 0.55
ARHGEF1-208ENST00000594417 C10orf71Q711Q0 1435 aa18.48■□□□□ 0.55
ARHGEF1-208ENST00000594417 PXDNLA1KZ92 1463 aa18.47■□□□□ 0.55
ARHGEF1-208ENST00000594417 COL15A1P39059 1388 aa18.47■□□□□ 0.55
ARHGEF1-208ENST00000594417 HEG1Q9ULI3 1381 aa18.47■□□□□ 0.55
ARHGEF1-208ENST00000594417 POLRMTO00411 1230 aaKnown RBP18.47■□□□□ 0.55
ARHGEF1-208ENST00000594417 GPBP1L1Q9HC44 474 aaPredicted RBP18.47■□□□□ 0.55
ARHGEF1-208ENST00000594417 SCN11AQ9UI33 1791 aa18.46■□□□□ 0.55
ARHGEF1-208ENST00000594417 KCPQ6ZWJ8 1503 aa18.46■□□□□ 0.55
ARHGEF1-208ENST00000594417 HTATSF1O43719 755 aaKnown RBP18.46■□□□□ 0.55
ARHGEF1-208ENST00000594417 EIF5P55010 431 aaKnown RBP18.46■□□□□ 0.55
ARHGEF1-208ENST00000594417 NFIXQ14938 502 aa18.46■□□□□ 0.55
ARHGEF1-208ENST00000594417 ZNF526Q8TF50 670 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF1-208ENST00000594417 GOLGB1Q14789 3259 aaKnown RBP18.45■□□□□ 0.54
ARHGEF1-208ENST00000594417 CEMIPQ8WUJ3 1361 aa18.45■□□□□ 0.54
ARHGEF1-208ENST00000594417 KCNQ3O43525 872 aa18.45■□□□□ 0.54
ARHGEF1-208ENST00000594417 DALRD3Q5D0E6 543 aaKnown RBP18.45■□□□□ 0.54
ARHGEF1-208ENST00000594417 BICDL1Q6ZP65 573 aa18.45■□□□□ 0.54
ARHGEF1-208ENST00000594417 ATP10DQ9P241 1426 aa18.45■□□□□ 0.54
ARHGEF1-208ENST00000594417 COL5A3P25940 1745 aaPredicted RBP18.44■□□□□ 0.54
ARHGEF1-208ENST00000594417 A1BGP04217 495 aa18.44■□□□□ 0.54
ARHGEF1-208ENST00000594417 SERPINB2P05120 415 aa18.44■□□□□ 0.54
ARHGEF1-208ENST00000594417 KCNA3P22001 575 aa18.44■□□□□ 0.54
ARHGEF1-208ENST00000594417 DCTN1Q14203 1278 aa18.44■□□□□ 0.54
ARHGEF1-208ENST00000594417 PNNQ9H307 717 aaKnown RBP18.44■□□□□ 0.54
ARHGEF1-208ENST00000594417 SENP3-EIF4A1A0A087X0R7 540 aa18.43■□□□□ 0.54
ARHGEF1-208ENST00000594417 CHRNA5P30532 468 aa18.43■□□□□ 0.54
ARHGEF1-208ENST00000594417 IL6STP40189 918 aaPredicted RBP18.43■□□□□ 0.54
ARHGEF1-208ENST00000594417 BCL2L12Q9HB09 334 aa18.43■□□□□ 0.54
ARHGEF1-208ENST00000594417 TBC1D2BQ9UPU7 963 aa18.43■□□□□ 0.54
ARHGEF1-208ENST00000594417 SNRPA1P09661 255 aaKnown RBP18.42■□□□□ 0.54
ARHGEF1-208ENST00000594417 TAF7Q15545 349 aaPredicted RBP18.42■□□□□ 0.54
ARHGEF1-208ENST00000594417 CHD4Q14839 1912 aa18.42■□□□□ 0.54
ARHGEF1-208ENST00000594417 TJP1Q07157 1748 aa18.41■□□□□ 0.54
ARHGEF1-208ENST00000594417 USP16Q9Y5T5 823 aa18.41■□□□□ 0.54
ARHGEF1-208ENST00000594417 MYH14Q7Z406 1995 aaKnown RBP18.41■□□□□ 0.54
ARHGEF1-208ENST00000594417 C4AP0C0L4 1744 aa18.4■□□□□ 0.54
ARHGEF1-208ENST00000594417 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
ARHGEF1-208ENST00000594417 RALBP1Q15311 655 aa18.4■□□□□ 0.54
ARHGEF1-208ENST00000594417 ADAMTS7Q9UKP4 1686 aa18.39■□□□□ 0.53
ARHGEF1-208ENST00000594417 NPHP1O15259 732 aa18.39■□□□□ 0.53
ARHGEF1-208ENST00000594417 TBC1D9BQ66K14 1250 aa18.39■□□□□ 0.53
ARHGEF1-208ENST00000594417 MIS18AQ9NYP9 233 aa18.39■□□□□ 0.53
ARHGEF1-208ENST00000594417 MAPK8IP3Q9UPT6 1336 aa18.39■□□□□ 0.53
ARHGEF1-208ENST00000594417 H0YIN7 160 aa18.38■□□□□ 0.53
ARHGEF1-208ENST00000594417 C2CD5Q86YS7 1000 aa18.38■□□□□ 0.53
ARHGEF1-208ENST00000594417 PNISRQ8TF01 805 aaKnown RBP18.38■□□□□ 0.53
ARHGEF1-208ENST00000594417 SETDB2Q96T68 719 aa18.38■□□□□ 0.53
ARHGEF1-208ENST00000594417 PRAMEF22A3QJZ6 481 aa18.37■□□□□ 0.53
ARHGEF1-208ENST00000594417 NFE2L2Q16236 605 aa18.37■□□□□ 0.53
ARHGEF1-208ENST00000594417 DZIP3Q86Y13 1208 aaKnown RBP18.37■□□□□ 0.53
ARHGEF1-208ENST00000594417 ADCY9O60503 1353 aa18.37■□□□□ 0.53
ARHGEF1-208ENST00000594417 PIP4K2AP48426 406 aaPredicted RBP18.36■□□□□ 0.53
ARHGEF1-208ENST00000594417 C9orf131Q5VYM1 1079 aa18.36■□□□□ 0.53
ARHGEF1-208ENST00000594417 PLEKHF1Q96S99 279 aa18.36■□□□□ 0.53
ARHGEF1-208ENST00000594417 TTLL6Q8N841 843 aa18.35■□□□□ 0.53
ARHGEF1-208ENST00000594417 CAMTA2O94983 1202 aa18.34■□□□□ 0.53
ARHGEF1-208ENST00000594417 PDE6BP35913 854 aa18.34■□□□□ 0.53
ARHGEF1-208ENST00000594417 BRIP1Q9BX63 1249 aa18.34■□□□□ 0.53
ARHGEF1-208ENST00000594417 CCDC24Q8N4L8 307 aa18.33■□□□□ 0.52
ARHGEF1-208ENST00000594417 ZNF622Q969S3 477 aaKnown RBP eCLIP18.33■□□□□ 0.52
ARHGEF1-208ENST00000594417 PDZRN3Q9UPQ7 1066 aa18.33■□□□□ 0.52
ARHGEF1-208ENST00000594417 ZNF652Q9Y2D9 606 aa18.33■□□□□ 0.52
ARHGEF1-208ENST00000594417 CARMIL3Q8ND23 1372 aa18.32■□□□□ 0.52
ARHGEF1-208ENST00000594417 CNBD1Q8NA66 436 aa18.32■□□□□ 0.52
ARHGEF1-208ENST00000594417 THUMPD2Q9BTF0 503 aaKnown RBP18.32■□□□□ 0.52
ARHGEF1-208ENST00000594417 RNF181Q9P0P0 153 aa18.32■□□□□ 0.52
ARHGEF1-208ENST00000594417 ST5P78524 1137 aa18.31■□□□□ 0.52
ARHGEF1-208ENST00000594417 PRR5LQ6MZQ0 368 aa18.31■□□□□ 0.52
ARHGEF1-208ENST00000594417 CLEC4GQ6UXB4 293 aa18.31■□□□□ 0.52
ARHGEF1-208ENST00000594417 RIPK4P57078 832 aa18.3■□□□□ 0.52
ARHGEF1-208ENST00000594417 NBPF5PQ86XG9 351 aaPredicted RBP18.3■□□□□ 0.52
ARHGEF1-208ENST00000594417 NGEFQ8N5V2 710 aa18.3■□□□□ 0.52
ARHGEF1-208ENST00000594417 N4BP2Q86UW6 1770 aaPredicted RBP18.3■□□□□ 0.52
ARHGEF1-208ENST00000594417 KIF13BQ9NQT8 1826 aa18.29■□□□□ 0.52
ARHGEF1-208ENST00000594417 NBPF26B4DH59 902 aa18.29■□□□□ 0.52
ARHGEF1-208ENST00000594417 NBPF10Q6P3W6 841 aaKnown RBP18.29■□□□□ 0.52
ARHGEF1-208ENST00000594417 NBPF15Q8N660 670 aa18.29■□□□□ 0.52
ARHGEF1-208ENST00000594417 UBR2Q8IWV8 1755 aa18.29■□□□□ 0.52
ARHGEF1-208ENST00000594417 MYBBP1AQ9BQG0 1328 aaKnown RBP18.28■□□□□ 0.52
ARHGEF1-208ENST00000594417 KIF3CO14782 793 aa18.28■□□□□ 0.52
ARHGEF1-208ENST00000594417 EIF4A1P60842 406 aaKnown RBP18.28■□□□□ 0.52
ARHGEF1-208ENST00000594417 ZNF219Q9P2Y4 722 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF1-208ENST00000594417 RRP7AQ9Y3A4 280 aaKnown RBP18.28■□□□□ 0.52
ARHGEF1-208ENST00000594417 LMOD3Q0VAK6 560 aa18.27■□□□□ 0.52
ARHGEF1-208ENST00000594417 WDR43Q15061 677 aaKnown RBP eCLIP18.27■□□□□ 0.52
ARHGEF1-208ENST00000594417 TPTE2Q6XPS3 522 aa18.27■□□□□ 0.52
ARHGEF1-208ENST00000594417 C16orf71Q8IYS4 520 aaPredicted RBP18.27■□□□□ 0.52
ARHGEF1-208ENST00000594417 TSPYL4Q9UJ04 414 aa18.27■□□□□ 0.52
ARHGEF1-208ENST00000594417 NIP7Q9Y221 180 aaKnown RBP eCLIP18.27■□□□□ 0.52
ARHGEF1-208ENST00000594417 KDM2BQ8NHM5 1336 aa18.26■□□□□ 0.51
ARHGEF1-208ENST00000594417 FAM177BA6PVY3 158 aa18.26■□□□□ 0.51
ARHGEF1-208ENST00000594417 LMNB1P20700 586 aa18.26■□□□□ 0.51
ARHGEF1-208ENST00000594417 GTF2E1P29083 439 aaPredicted RBP18.26■□□□□ 0.51
ARHGEF1-208ENST00000594417 RASSF7Q02833 373 aa18.26■□□□□ 0.51
ARHGEF1-208ENST00000594417 NMRK2Q9NPI5 230 aa18.26■□□□□ 0.51
ARHGEF1-208ENST00000594417 KIAA1551Q9HCM1 1747 aa18.26■□□□□ 0.51
ARHGEF1-208ENST00000594417 RGL2O15211 777 aa18.25■□□□□ 0.51
ARHGEF1-208ENST00000594417 C21orf2O43822 256 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms