RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 ADAMTS7Q9UKP4 1686 aa20.29■□□□□ 0.84
PRKCSH-217ENST00000592741 SRGAP3O43295 1099 aa20.29■□□□□ 0.84
PRKCSH-217ENST00000592741 GIGYF1O75420 1035 aaPredicted RBP20.29■□□□□ 0.84
PRKCSH-217ENST00000592741 ANXA1P04083 346 aa20.29■□□□□ 0.84
PRKCSH-217ENST00000592741 RILPL2Q969X0 211 aa20.29■□□□□ 0.84
PRKCSH-217ENST00000592741 HEG1Q9ULI3 1381 aa20.29■□□□□ 0.84
PRKCSH-217ENST00000592741 NBPF7P0C2Y1 421 aaPredicted RBP20.28■□□□□ 0.84
PRKCSH-217ENST00000592741 ATF3P18847 181 aa20.28■□□□□ 0.84
PRKCSH-217ENST00000592741 MCCP23508 829 aa20.27■□□□□ 0.84
PRKCSH-217ENST00000592741 IL1RAPL2Q9NP60 686 aa20.27■□□□□ 0.84
PRKCSH-217ENST00000592741 CHMLP26374 656 aa20.27■□□□□ 0.84
PRKCSH-217ENST00000592741 HSP90AB4PQ58FF6 505 aa20.27■□□□□ 0.84
PRKCSH-217ENST00000592741 KIF1BPQ96EK5 621 aa20.27■□□□□ 0.84
PRKCSH-217ENST00000592741 GZF1Q9H116 711 aaPredicted RBP20.27■□□□□ 0.84
PRKCSH-217ENST00000592741 ALDH1L1O75891 902 aa20.26■□□□□ 0.83
PRKCSH-217ENST00000592741 ZC3H6P61129 1189 aaKnown RBP20.26■□□□□ 0.83
PRKCSH-217ENST00000592741 RHPN1Q8TCX5 695 aa20.26■□□□□ 0.83
PRKCSH-217ENST00000592741 GOLGA6L3A6NEY3 463 aa20.26■□□□□ 0.83
PRKCSH-217ENST00000592741 DCCP43146 1447 aa20.26■□□□□ 0.83
PRKCSH-217ENST00000592741 RAPGEF4Q8WZA2 1011 aa20.25■□□□□ 0.83
PRKCSH-217ENST00000592741 MAP3K2Q9Y2U5 619 aa20.25■□□□□ 0.83
PRKCSH-217ENST00000592741 SSFA2P28290 1259 aa20.24■□□□□ 0.83
PRKCSH-217ENST00000592741 KSR2Q6VAB6 950 aa20.24■□□□□ 0.83
PRKCSH-217ENST00000592741 NUTM1Q86Y26 1132 aa20.24■□□□□ 0.83
PRKCSH-217ENST00000592741 HYPKQ9NX55 129 aa20.24■□□□□ 0.83
PRKCSH-217ENST00000592741 HDAC5Q9UQL6 1122 aa20.24■□□□□ 0.83
PRKCSH-217ENST00000592741 NUCB2P80303 420 aa20.24■□□□□ 0.83
PRKCSH-217ENST00000592741 SKOR2Q2VWA4 1001 aaPredicted RBP20.24■□□□□ 0.83
PRKCSH-217ENST00000592741 CWC22Q9HCG8 908 aaKnown RBP20.24■□□□□ 0.83
PRKCSH-217ENST00000592741 TMEM94Q12767 1356 aa20.23■□□□□ 0.83
PRKCSH-217ENST00000592741 PROSER3Q2NL68 480 aa20.23■□□□□ 0.83
PRKCSH-217ENST00000592741 FSD2A1L4K1 749 aa20.23■□□□□ 0.83
PRKCSH-217ENST00000592741 GOLGA6L22H0YM25 854 aa20.23■□□□□ 0.83
PRKCSH-217ENST00000592741 CLEC17AQ6ZS10 378 aa20.23■□□□□ 0.83
PRKCSH-217ENST00000592741 NLRP2Q9NX02 1062 aa20.23■□□□□ 0.83
PRKCSH-217ENST00000592741 C9orf78Q9NZ63 289 aaPredicted RBP20.23■□□□□ 0.83
PRKCSH-217ENST00000592741 ABCC6O95255 1503 aa20.22■□□□□ 0.83
PRKCSH-217ENST00000592741 TATP17735 454 aaPredicted RBP20.22■□□□□ 0.83
PRKCSH-217ENST00000592741 ANAPC15P60006 121 aa20.22■□□□□ 0.83
PRKCSH-217ENST00000592741 MTX1Q13505 466 aa20.22■□□□□ 0.83
PRKCSH-217ENST00000592741 UNC5CLQ8IV45 518 aa20.22■□□□□ 0.83
PRKCSH-217ENST00000592741 ANO2Q9NQ90 1003 aa20.22■□□□□ 0.83
PRKCSH-217ENST00000592741 DDX58O95786 925 aaKnown RBP20.21■□□□□ 0.83
PRKCSH-217ENST00000592741 SCN11AQ9UI33 1791 aa20.21■□□□□ 0.83
PRKCSH-217ENST00000592741 PRAMEF22A3QJZ6 481 aa20.21■□□□□ 0.83
PRKCSH-217ENST00000592741 SPG7Q9UQ90 795 aa20.21■□□□□ 0.83
PRKCSH-217ENST00000592741 AK9Q5TCS8 1911 aa20.21■□□□□ 0.83
PRKCSH-217ENST00000592741 EPB41L2O43491 1005 aaKnown RBP20.2■□□□□ 0.82
PRKCSH-217ENST00000592741 MCM2P49736 904 aa20.2■□□□□ 0.82
PRKCSH-217ENST00000592741 OS9Q13438 667 aaPredicted RBP20.2■□□□□ 0.82
PRKCSH-217ENST00000592741 PI4K2BQ8TCG2 481 aa20.2■□□□□ 0.82
PRKCSH-217ENST00000592741 DDX21Q9NR30 783 aaKnown RBP eCLIP20.2■□□□□ 0.82
PRKCSH-217ENST00000592741 NPHP3Q7Z494 1330 aa20.2■□□□□ 0.82
PRKCSH-217ENST00000592741 STRCP1A6NGW2 1772 aa20.19■□□□□ 0.82
PRKCSH-217ENST00000592741 COL18A1P39060 1754 aa20.19■□□□□ 0.82
PRKCSH-217ENST00000592741 KDM6AO15550 1401 aaPredicted RBP20.19■□□□□ 0.82
PRKCSH-217ENST00000592741 NEK4P51957 841 aa20.19■□□□□ 0.82
PRKCSH-217ENST00000592741 SLC52A2Q9HAB3 445 aa20.19■□□□□ 0.82
PRKCSH-217ENST00000592741 TNS3Q68CZ2 1445 aa20.19■□□□□ 0.82
PRKCSH-217ENST00000592741 PLEKHG2Q9H7P9 1386 aa20.18■□□□□ 0.82
PRKCSH-217ENST00000592741 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.18■□□□□ 0.82
PRKCSH-217ENST00000592741 CRYBG1Q9Y4K1 1723 aa20.18■□□□□ 0.82
PRKCSH-217ENST00000592741 USP42Q9H9J4 1324 aaKnown RBP20.18■□□□□ 0.82
PRKCSH-217ENST00000592741 BAG4O95429 457 aaKnown RBP20.18■□□□□ 0.82
PRKCSH-217ENST00000592741 CSB-PGBD3P0DP91 1061 aa20.18■□□□□ 0.82
PRKCSH-217ENST00000592741 PHKG2P15735 406 aa20.18■□□□□ 0.82
PRKCSH-217ENST00000592741 ZNF790Q6PG37 636 aa20.18■□□□□ 0.82
PRKCSH-217ENST00000592741 CNTROBQ8N137 903 aa20.18■□□□□ 0.82
PRKCSH-217ENST00000592741 LINS1Q8NG48 757 aa20.18■□□□□ 0.82
PRKCSH-217ENST00000592741 CYP2E1P05181 493 aaPredicted RBP20.17■□□□□ 0.82
PRKCSH-217ENST00000592741 CADPS2Q86UW7 1296 aa20.17■□□□□ 0.82
PRKCSH-217ENST00000592741 DDX17Q92841 729 aaKnown RBP20.17■□□□□ 0.82
PRKCSH-217ENST00000592741 ISY1Q9ULR0 285 aaKnown RBP20.17■□□□□ 0.82
PRKCSH-217ENST00000592741 MEGF6O75095 1541 aa20.17■□□□□ 0.82
PRKCSH-217ENST00000592741 TTC41PQ6P2S7 1318 aa20.17■□□□□ 0.82
PRKCSH-217ENST00000592741 CWF19L2Q2TBE0 894 aaKnown RBP20.17■□□□□ 0.82
PRKCSH-217ENST00000592741 ERC1Q8IUD2 1116 aa20.17■□□□□ 0.82
PRKCSH-217ENST00000592741 IL17RAQ96F46 866 aa20.17■□□□□ 0.82
PRKCSH-217ENST00000592741 C5P01031 1676 aa20.16■□□□□ 0.82
PRKCSH-217ENST00000592741 IFNL2Q8IZJ0 200 aa20.16■□□□□ 0.82
PRKCSH-217ENST00000592741 ARXQ96QS3 562 aa20.16■□□□□ 0.82
PRKCSH-217ENST00000592741 RTN4Q9NQC3 1192 aaKnown RBP20.16■□□□□ 0.82
PRKCSH-217ENST00000592741 PALD1Q9ULE6 856 aa20.16■□□□□ 0.82
PRKCSH-217ENST00000592741 GRM8O00222 908 aa20.15■□□□□ 0.82
PRKCSH-217ENST00000592741 MAP4K4O95819 1239 aaPredicted RBP20.15■□□□□ 0.82
PRKCSH-217ENST00000592741 CLASRPQ8N2M8 674 aaKnown RBP20.15■□□□□ 0.82
PRKCSH-217ENST00000592741 UTYO14607 1347 aa20.15■□□□□ 0.82
PRKCSH-217ENST00000592741 AIMP1Q12904 312 aaKnown RBP20.15■□□□□ 0.82
PRKCSH-217ENST00000592741 SLC39A6Q13433 755 aa20.15■□□□□ 0.82
PRKCSH-217ENST00000592741 PDIA6Q15084 440 aa20.15■□□□□ 0.82
PRKCSH-217ENST00000592741 ZGPATQ8N5A5 531 aaKnown RBP20.15■□□□□ 0.82
PRKCSH-217ENST00000592741 GLRX3O76003 335 aaKnown RBP20.14■□□□□ 0.81
PRKCSH-217ENST00000592741 XRCC6P12956 609 aaKnown RBP eCLIP20.14■□□□□ 0.81
PRKCSH-217ENST00000592741 MRE11P49959 708 aa20.14■□□□□ 0.81
PRKCSH-217ENST00000592741 GPATCH3Q96I76 525 aa20.14■□□□□ 0.81
PRKCSH-217ENST00000592741 TMX3Q96JJ7 454 aa20.14■□□□□ 0.81
PRKCSH-217ENST00000592741 MRC1P22897 1456 aa20.13■□□□□ 0.81
PRKCSH-217ENST00000592741 LARP1Q6PKG0 1096 aaKnown RBP20.13■□□□□ 0.81
PRKCSH-217ENST00000592741 RIC3Q7Z5B4 369 aa20.13■□□□□ 0.81
PRKCSH-217ENST00000592741 NFATC2IPQ8NCF5 419 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms