RNA–Protein interactions for RNA: ENST00000592573.1

RDH13-221, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 1,481 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-221ENST00000592573 NUP188Q5SRE5 1749 aa22.99■■□□□ 1.27
RDH13-221ENST00000592573 TCERG1O14776 1098 aaKnown RBP22.98■■□□□ 1.27
RDH13-221ENST00000592573 STARD3NLO95772 234 aa22.98■■□□□ 1.27
RDH13-221ENST00000592573 CANXP27824 592 aaKnown RBP22.98■■□□□ 1.27
RDH13-221ENST00000592573 INTS5Q6P9B9 1019 aaKnown RBP22.98■■□□□ 1.27
RDH13-221ENST00000592573 TRMT2AQ8IZ69 625 aaKnown RBP22.98■■□□□ 1.27
RDH13-221ENST00000592573 AK7Q96M32 723 aa22.98■■□□□ 1.27
RDH13-221ENST00000592573 ZBTB1Q9Y2K1 713 aa22.98■■□□□ 1.27
RDH13-221ENST00000592573 GNPATO15228 680 aa22.97■■□□□ 1.27
RDH13-221ENST00000592573 TWISTNBQ3B726 338 aaPredicted RBP22.97■■□□□ 1.27
RDH13-221ENST00000592573 AKT1S1Q96B36 256 aa22.97■■□□□ 1.27
RDH13-221ENST00000592573 CCDC87Q9NVE4 849 aa22.97■■□□□ 1.27
RDH13-221ENST00000592573 PHF14O94880 888 aa22.96■■□□□ 1.27
RDH13-221ENST00000592573 ANXA1P04083 346 aa22.96■■□□□ 1.27
RDH13-221ENST00000592573 TEX13AQ9BXU3 409 aaPredicted RBP22.96■■□□□ 1.27
RDH13-221ENST00000592573 STK32BQ9NY57 414 aa22.96■■□□□ 1.27
RDH13-221ENST00000592573 ZNF330Q9Y3S2 320 aaPredicted RBP22.96■■□□□ 1.27
RDH13-221ENST00000592573 C4BP0C0L5 1744 aa22.96■■□□□ 1.27
RDH13-221ENST00000592573 HDGFL1Q5TGJ6 251 aa22.95■■□□□ 1.26
RDH13-221ENST00000592573 TFCP2L1Q9NZI6 479 aa22.95■■□□□ 1.26
RDH13-221ENST00000592573 TAF1LQ8IZX4 1826 aa22.94■■□□□ 1.26
RDH13-221ENST00000592573 CNTNAP4Q9C0A0 1308 aa22.94■■□□□ 1.26
RDH13-221ENST00000592573 ZNF831Q5JPB2 1677 aa22.94■■□□□ 1.26
RDH13-221ENST00000592573 COL5A3P25940 1745 aaPredicted RBP22.94■■□□□ 1.26
RDH13-221ENST00000592573 PSDA5PKW4 1024 aaPredicted RBP22.93■■□□□ 1.26
RDH13-221ENST00000592573 NBPF26B4DH59 902 aa22.93■■□□□ 1.26
RDH13-221ENST00000592573 SLC15A2Q16348 729 aa22.93■■□□□ 1.26
RDH13-221ENST00000592573 PROSER3Q2NL68 480 aa22.93■■□□□ 1.26
RDH13-221ENST00000592573 NBPF14Q5TI25 921 aa22.93■■□□□ 1.26
RDH13-221ENST00000592573 NBPF10Q6P3W6 841 aaKnown RBP22.93■■□□□ 1.26
RDH13-221ENST00000592573 NBPF15Q8N660 670 aa22.93■■□□□ 1.26
RDH13-221ENST00000592573 VAMP4O75379 141 aa22.92■■□□□ 1.26
RDH13-221ENST00000592573 MYL6BP14649 208 aa22.92■■□□□ 1.26
RDH13-221ENST00000592573 R3HDM1Q15032 1099 aaKnown RBP22.92■■□□□ 1.26
RDH13-221ENST00000592573 RC3H1Q5TC82 1133 aaKnown RBP22.92■■□□□ 1.26
RDH13-221ENST00000592573 PDGFDQ9GZP0 370 aaPredicted RBP22.92■■□□□ 1.26
RDH13-221ENST00000592573 CHPF2Q9P2E5 772 aa22.92■■□□□ 1.26
RDH13-221ENST00000592573 CICQ96RK0 1608 aaPredicted RBP22.91■■□□□ 1.26
RDH13-221ENST00000592573 HOXB7P09629 217 aa22.9■■□□□ 1.26
RDH13-221ENST00000592573 RTCBQ9Y3I0 505 aaKnown RBP22.9■■□□□ 1.26
RDH13-221ENST00000592573 MYH14Q7Z406 1995 aaKnown RBP22.9■■□□□ 1.26
RDH13-221ENST00000592573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.89■■□□□ 1.25
RDH13-221ENST00000592573 RPS6KA4O75676 772 aa22.89■■□□□ 1.25
RDH13-221ENST00000592573 PDIA6Q15084 440 aa22.89■■□□□ 1.25
RDH13-221ENST00000592573 ARXQ96QS3 562 aa22.89■■□□□ 1.25
RDH13-221ENST00000592573 LAMB4A4D0S4 1761 aa22.89■■□□□ 1.25
RDH13-221ENST00000592573 SOS1Q07889 1333 aaPredicted RBP22.88■■□□□ 1.25
RDH13-221ENST00000592573 MSH5O43196 834 aa22.88■■□□□ 1.25
RDH13-221ENST00000592573 PNPLA7Q6ZV29 1317 aa22.87■■□□□ 1.25
RDH13-221ENST00000592573 COL23A1Q86Y22 540 aaPredicted RBP22.87■■□□□ 1.25
RDH13-221ENST00000592573 CCDC30Q5VVM6 783 aa22.85■■□□□ 1.25
RDH13-221ENST00000592573 ARHGEF1Q92888 912 aaKnown RBP22.85■■□□□ 1.25
RDH13-221ENST00000592573 BCL2L13Q9BXK5 485 aa22.85■■□□□ 1.25
RDH13-221ENST00000592573 EIF5P55010 431 aaKnown RBP22.85■■□□□ 1.25
RDH13-221ENST00000592573 AIMP1Q12904 312 aaKnown RBP22.85■■□□□ 1.25
RDH13-221ENST00000592573 TRAPPC3LQ5T215 181 aa22.85■■□□□ 1.25
RDH13-221ENST00000592573 SRP68Q9UHB9 627 aaKnown RBP22.85■■□□□ 1.25
RDH13-221ENST00000592573 TBC1D2BQ9UPU7 963 aa22.85■■□□□ 1.25
RDH13-221ENST00000592573 COL15A1P39059 1388 aa22.84■■□□□ 1.25
RDH13-221ENST00000592573 TUBGCP6Q96RT7 1819 aa22.84■■□□□ 1.25
RDH13-221ENST00000592573 IL6STP40189 918 aaPredicted RBP22.84■■□□□ 1.25
RDH13-221ENST00000592573 LRP10Q7Z4F1 713 aa22.84■■□□□ 1.25
RDH13-221ENST00000592573 DDX21Q9NR30 783 aaKnown RBP eCLIP22.84■■□□□ 1.25
RDH13-221ENST00000592573 SSFA2P28290 1259 aa22.83■■□□□ 1.25
RDH13-221ENST00000592573 TTLL7Q6ZT98 887 aa22.83■■□□□ 1.25
RDH13-221ENST00000592573 PHAXQ9H814 394 aaKnown RBP22.83■■□□□ 1.25
RDH13-221ENST00000592573 DBF4Q9UBU7 674 aaPredicted RBP22.83■■□□□ 1.25
RDH13-221ENST00000592573 SLC4A2P04920 1241 aa22.82■■□□□ 1.24
RDH13-221ENST00000592573 G2E3Q7L622 706 aa22.82■■□□□ 1.24
RDH13-221ENST00000592573 XAGE3Q8WTP9 111 aa22.82■■□□□ 1.24
RDH13-221ENST00000592573 STK31Q9BXU1 1019 aa22.82■■□□□ 1.24
RDH13-221ENST00000592573 UBR3Q6ZT12 1888 aa22.82■■□□□ 1.24
RDH13-221ENST00000592573 ERBB4Q15303 1308 aa22.82■■□□□ 1.24
RDH13-221ENST00000592573 HMGB2P26583 209 aaKnown RBP22.81■■□□□ 1.24
RDH13-221ENST00000592573 SSH1Q8WYL5 1049 aa22.81■■□□□ 1.24
RDH13-221ENST00000592573 RFC4P35249 363 aa22.8■■□□□ 1.24
RDH13-221ENST00000592573 MSL1Q68DK7 614 aa22.8■■□□□ 1.24
RDH13-221ENST00000592573 COPS6Q7L5N1 327 aa22.8■■□□□ 1.24
RDH13-221ENST00000592573 NPM2Q86SE8 214 aaKnown RBP22.8■■□□□ 1.24
RDH13-221ENST00000592573 DZIP3Q86Y13 1208 aaKnown RBP22.79■■□□□ 1.24
RDH13-221ENST00000592573 USPL1Q5W0Q7 1092 aa22.79■■□□□ 1.24
RDH13-221ENST00000592573 ZBTB7AO95365 584 aa22.78■■□□□ 1.24
RDH13-221ENST00000592573 ADRA2BP18089 450 aa22.78■■□□□ 1.24
RDH13-221ENST00000592573 ZBTB3Q9H5J0 574 aa22.78■■□□□ 1.24
RDH13-221ENST00000592573 SMC4Q9NTJ3 1288 aa22.78■■□□□ 1.24
RDH13-221ENST00000592573 HYPKQ9NX55 129 aa22.78■■□□□ 1.24
RDH13-221ENST00000592573 RARSP54136 660 aaKnown RBP22.77■■□□□ 1.24
RDH13-221ENST00000592573 MRPL50Q8N5N7 158 aaKnown RBP22.77■■□□□ 1.24
RDH13-221ENST00000592573 FLAD1Q8NFF5 587 aa22.77■■□□□ 1.24
RDH13-221ENST00000592573 A0A087WZG4 1122 aa22.76■■□□□ 1.23
RDH13-221ENST00000592573 ZPR1O75312 459 aa22.76■■□□□ 1.23
RDH13-221ENST00000592573 CAMTA2O94983 1202 aa22.76■■□□□ 1.23
RDH13-221ENST00000592573 USP42Q9H9J4 1324 aaKnown RBP22.76■■□□□ 1.23
RDH13-221ENST00000592573 BCAR3O75815 825 aa22.75■■□□□ 1.23
RDH13-221ENST00000592573 CT47B1P0C2W7 299 aaPredicted RBP22.75■■□□□ 1.23
RDH13-221ENST00000592573 HLFQ16534 295 aa22.75■■□□□ 1.23
RDH13-221ENST00000592573 KIF6Q6ZMV9 814 aa22.75■■□□□ 1.23
RDH13-221ENST00000592573 NARFQ9UHQ1 456 aa22.75■■□□□ 1.23
RDH13-221ENST00000592573 ZNF428Q96B54 188 aa22.74■■□□□ 1.23
RDH13-221ENST00000592573 CHMP4AQ9BY43 222 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms