RNA–Protein interactions for RNA: ENST00000592065.2

GFAP-221, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 2,539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-221ENST00000592065 IL27Q8NEV9 243 aa17.03■□□□□ 0.32
GFAP-221ENST00000592065 ERVV-2B6SEH9 535 aa17.02■□□□□ 0.31
GFAP-221ENST00000592065 HSP90AB1P08238 724 aaKnown RBP17.02■□□□□ 0.31
GFAP-221ENST00000592065 THUMPD2Q9BTF0 503 aaKnown RBP17.02■□□□□ 0.31
GFAP-221ENST00000592065 MAPK8IP3Q9UPT6 1336 aa17.02■□□□□ 0.31
GFAP-221ENST00000592065 RUNDC1Q96C34 613 aa17.01■□□□□ 0.31
GFAP-221ENST00000592065 SLC52A2Q9HAB3 445 aa17.01■□□□□ 0.31
GFAP-221ENST00000592065 AAMPQ13685 434 aa17■□□□□ 0.31
GFAP-221ENST00000592065 COL23A1Q86Y22 540 aaPredicted RBP17■□□□□ 0.31
GFAP-221ENST00000592065 PANK1Q8TE04 598 aa17■□□□□ 0.31
GFAP-221ENST00000592065 MAP3K5Q99683 1374 aa17■□□□□ 0.31
GFAP-221ENST00000592065 C4BP0C0L5 1744 aa17■□□□□ 0.31
GFAP-221ENST00000592065 COG6Q9Y2V7 657 aa17■□□□□ 0.31
GFAP-221ENST00000592065 RRP7AQ9Y3A4 280 aaKnown RBP17■□□□□ 0.31
GFAP-221ENST00000592065 GNAT3A8MTJ3 354 aa16.99■□□□□ 0.31
GFAP-221ENST00000592065 KCNQ3O43525 872 aa16.99■□□□□ 0.31
GFAP-221ENST00000592065 RARSP54136 660 aaKnown RBP16.99■□□□□ 0.31
GFAP-221ENST00000592065 SMARCC1Q92922 1105 aaPredicted RBP16.99■□□□□ 0.31
GFAP-221ENST00000592065 GNPATO15228 680 aa16.98■□□□□ 0.31
GFAP-221ENST00000592065 SPON1Q9HCB6 807 aa16.98■□□□□ 0.31
GFAP-221ENST00000592065 MIS18AQ9NYP9 233 aa16.98■□□□□ 0.31
GFAP-221ENST00000592065 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.98■□□□□ 0.31
GFAP-221ENST00000592065 FCHSD2O94868 740 aa16.98■□□□□ 0.31
GFAP-221ENST00000592065 PTGER2P43116 358 aa16.98■□□□□ 0.31
GFAP-221ENST00000592065 NEUROD2Q15784 382 aa16.98■□□□□ 0.31
GFAP-221ENST00000592065 WDR63Q8IWG1 891 aa16.98■□□□□ 0.31
GFAP-221ENST00000592065 KLHL34Q8N239 644 aa16.98■□□□□ 0.31
GFAP-221ENST00000592065 CANXP27824 592 aaKnown RBP16.97■□□□□ 0.31
GFAP-221ENST00000592065 GAS2L2Q8NHY3 880 aa16.97■□□□□ 0.31
GFAP-221ENST00000592065 AK7Q96M32 723 aa16.97■□□□□ 0.31
GFAP-221ENST00000592065 CCDC27Q2M243 656 aa16.97■□□□□ 0.31
GFAP-221ENST00000592065 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
GFAP-221ENST00000592065 PLEKHF1Q96S99 279 aa16.97■□□□□ 0.31
GFAP-221ENST00000592065 PPP1R1BQ9UD71 204 aaPredicted RBP16.97■□□□□ 0.31
GFAP-221ENST00000592065 LRP5O75197 1615 aa16.96■□□□□ 0.31
GFAP-221ENST00000592065 MYH14Q7Z406 1995 aaKnown RBP16.96■□□□□ 0.31
GFAP-221ENST00000592065 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.96■□□□□ 0.31
GFAP-221ENST00000592065 DLG5Q8TDM6 1919 aa16.96■□□□□ 0.31
GFAP-221ENST00000592065 EIF5BO60841 1220 aaKnown RBP16.96■□□□□ 0.3
GFAP-221ENST00000592065 DNAJC10Q8IXB1 793 aa16.96■□□□□ 0.3
GFAP-221ENST00000592065 TEFQ10587 303 aa16.95■□□□□ 0.3
GFAP-221ENST00000592065 PRAMEF22A3QJZ6 481 aa16.95■□□□□ 0.3
GFAP-221ENST00000592065 FRAT1Q92837 279 aaPredicted RBP16.95■□□□□ 0.3
GFAP-221ENST00000592065 PLEKHG2Q9H7P9 1386 aa16.95■□□□□ 0.3
GFAP-221ENST00000592065 UBR3Q6ZT12 1888 aa16.94■□□□□ 0.3
GFAP-221ENST00000592065 PIP4K2AP48426 406 aaPredicted RBP16.94■□□□□ 0.3
GFAP-221ENST00000592065 MRC1P22897 1456 aa16.94■□□□□ 0.3
GFAP-221ENST00000592065 ADAMTS7Q9UKP4 1686 aa16.94■□□□□ 0.3
GFAP-221ENST00000592065 SEC24BO95487 1268 aa16.94■□□□□ 0.3
GFAP-221ENST00000592065 FRAT2O75474 233 aaPredicted RBP16.93■□□□□ 0.3
GFAP-221ENST00000592065 ZNF496Q96IT1 587 aaPredicted RBP16.93■□□□□ 0.3
GFAP-221ENST00000592065 MTFR1LQ9H019 292 aa16.93■□□□□ 0.3
GFAP-221ENST00000592065 RLBP1P12271 317 aa16.93■□□□□ 0.3
GFAP-221ENST00000592065 WWC3Q9ULE0 1092 aa16.93■□□□□ 0.3
GFAP-221ENST00000592065 KCPQ6ZWJ8 1503 aa16.92■□□□□ 0.3
GFAP-221ENST00000592065 TJP1Q07157 1748 aa16.92■□□□□ 0.3
GFAP-221ENST00000592065 SGIP1Q9BQI5 828 aa16.92■□□□□ 0.3
GFAP-221ENST00000592065 PCDHB15Q9Y5E8 787 aa16.92■□□□□ 0.3
GFAP-221ENST00000592065 CEMIPQ8WUJ3 1361 aa16.91■□□□□ 0.3
GFAP-221ENST00000592065 CRKLP46109 303 aaKnown RBP16.91■□□□□ 0.3
GFAP-221ENST00000592065 RTF1Q92541 710 aaKnown RBP16.91■□□□□ 0.3
GFAP-221ENST00000592065 PKNOX2Q96KN3 472 aa16.91■□□□□ 0.3
GFAP-221ENST00000592065 COL5A3P25940 1745 aaPredicted RBP16.91■□□□□ 0.3
GFAP-221ENST00000592065 FHDC1Q9C0D6 1143 aaPredicted RBP16.91■□□□□ 0.3
GFAP-221ENST00000592065 BTBD11A6QL63 1104 aa16.9■□□□□ 0.3
GFAP-221ENST00000592065 ZNF790Q6PG37 636 aa16.9■□□□□ 0.3
GFAP-221ENST00000592065 SIPA1L3O60292 1781 aaPredicted RBP16.9■□□□□ 0.3
GFAP-221ENST00000592065 TTC5Q8N0Z6 440 aa16.9■□□□□ 0.3
GFAP-221ENST00000592065 ZNF330Q9Y3S2 320 aaPredicted RBP16.9■□□□□ 0.3
GFAP-221ENST00000592065 TNNQ9UQP3 1299 aa16.89■□□□□ 0.29
GFAP-221ENST00000592065 SRP68Q9UHB9 627 aaKnown RBP16.89■□□□□ 0.29
GFAP-221ENST00000592065 ZBTB1Q9Y2K1 713 aa16.89■□□□□ 0.29
GFAP-221ENST00000592065 MYH16Q9H6N6 1097 aa16.88■□□□□ 0.29
GFAP-221ENST00000592065 BRPF3Q9ULD4 1205 aa16.88■□□□□ 0.29
GFAP-221ENST00000592065 RIPK4P57078 832 aa16.88■□□□□ 0.29
GFAP-221ENST00000592065 BECN1Q14457 450 aa16.88■□□□□ 0.29
GFAP-221ENST00000592065 NFE2L2Q16236 605 aa16.88■□□□□ 0.29
GFAP-221ENST00000592065 ARHGEF1Q92888 912 aaKnown RBP16.87■□□□□ 0.29
GFAP-221ENST00000592065 RTN4Q9NQC3 1192 aaKnown RBP16.87■□□□□ 0.29
GFAP-221ENST00000592065 UBR2Q8IWV8 1755 aa16.87■□□□□ 0.29
GFAP-221ENST00000592065 QSER1Q2KHR3 1735 aa16.87■□□□□ 0.29
GFAP-221ENST00000592065 INTS5Q6P9B9 1019 aaKnown RBP16.87■□□□□ 0.29
GFAP-221ENST00000592065 ARXQ96QS3 562 aa16.87■□□□□ 0.29
GFAP-221ENST00000592065 PDZRN3Q9UPQ7 1066 aa16.87■□□□□ 0.29
GFAP-221ENST00000592065 RTCBQ9Y3I0 505 aaKnown RBP16.87■□□□□ 0.29
GFAP-221ENST00000592065 BCL2L13Q9BXK5 485 aa16.86■□□□□ 0.29
GFAP-221ENST00000592065 RWDD1Q9H446 243 aaPredicted RBP16.86■□□□□ 0.29
GFAP-221ENST00000592065 CYP19A1P11511 503 aaPredicted RBP16.85■□□□□ 0.29
GFAP-221ENST00000592065 TMPOP42166 694 aaKnown RBP16.85■□□□□ 0.29
GFAP-221ENST00000592065 NLGN2Q8NFZ4 835 aa16.85■□□□□ 0.29
GFAP-221ENST00000592065 TBC1D32Q96NH3 1257 aa16.85■□□□□ 0.29
GFAP-221ENST00000592065 CT47B1P0C2W7 299 aaPredicted RBP16.85■□□□□ 0.29
GFAP-221ENST00000592065 MVPQ14764 893 aaKnown RBP16.85■□□□□ 0.29
GFAP-221ENST00000592065 SYT17Q9BSW7 474 aa16.85■□□□□ 0.29
GFAP-221ENST00000592065 USP16Q9Y5T5 823 aa16.85■□□□□ 0.29
GFAP-221ENST00000592065 C4AP0C0L4 1744 aa16.84■□□□□ 0.29
GFAP-221ENST00000592065 A1BGP04217 495 aa16.84■□□□□ 0.29
GFAP-221ENST00000592065 SSFA2P28290 1259 aa16.84■□□□□ 0.29
GFAP-221ENST00000592065 TRAPPC3LQ5T215 181 aa16.84■□□□□ 0.29
GFAP-221ENST00000592065 CNTNAP4Q9C0A0 1308 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms