RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 NUDT12Q9BQG2 462 aa11.4□□□□□ -0.58
VMP1-213ENST00000591877 TMEM2Q9UHN6 1383 aa11.4□□□□□ -0.59
VMP1-213ENST00000591877 ADGRB3O60242 1522 aa11.4□□□□□ -0.59
VMP1-213ENST00000591877 HOXA2O43364 376 aa11.39□□□□□ -0.59
VMP1-213ENST00000591877 TXNDC2Q86VQ3 553 aa11.39□□□□□ -0.59
VMP1-213ENST00000591877 RRBP1Q9P2E9 1410 aaKnown RBP11.39□□□□□ -0.59
VMP1-213ENST00000591877 ALKQ9UM73 1620 aa11.38□□□□□ -0.59
VMP1-213ENST00000591877 XIRP1Q702N8 1843 aaKnown RBP11.38□□□□□ -0.59
VMP1-213ENST00000591877 UBAP1LF5GYI3 381 aa11.38□□□□□ -0.59
VMP1-213ENST00000591877 USP46P62068 366 aa11.38□□□□□ -0.59
VMP1-213ENST00000591877 RSBN1LQ6PCB5 846 aaPredicted RBP11.38□□□□□ -0.59
VMP1-213ENST00000591877 NUTM1Q86Y26 1132 aa11.38□□□□□ -0.59
VMP1-213ENST00000591877 CCDC97Q96F63 343 aaPredicted RBP11.38□□□□□ -0.59
VMP1-213ENST00000591877 LRRC7Q96NW7 1537 aa11.37□□□□□ -0.59
VMP1-213ENST00000591877 SH3BP2P78314 561 aa11.37□□□□□ -0.59
VMP1-213ENST00000591877 TMEM131LA2VDJ0 1609 aa11.37□□□□□ -0.59
VMP1-213ENST00000591877 SOBPA7XYQ1 873 aa11.36□□□□□ -0.59
VMP1-213ENST00000591877 SNRKQ9NRH2 765 aa11.36□□□□□ -0.59
VMP1-213ENST00000591877 SLC52A1Q9NWF4 448 aa11.36□□□□□ -0.59
VMP1-213ENST00000591877 TRIM26Q12899 539 aaPredicted RBP11.35□□□□□ -0.59
VMP1-213ENST00000591877 WWC1Q8IX03 1113 aa11.35□□□□□ -0.59
VMP1-213ENST00000591877 PRM3Q9NNZ6 103 aa11.35□□□□□ -0.59
VMP1-213ENST00000591877 EID1Q9Y6B2 187 aa11.35□□□□□ -0.59
VMP1-213ENST00000591877 TLL2Q9Y6L7 1015 aa11.35□□□□□ -0.59
VMP1-213ENST00000591877 NUP155O75694 1391 aa11.34□□□□□ -0.59
VMP1-213ENST00000591877 PDIA4P13667 645 aaKnown RBP11.34□□□□□ -0.59
VMP1-213ENST00000591877 ZFYVE9O95405 1425 aa11.34□□□□□ -0.59
VMP1-213ENST00000591877 LILRB3O75022 631 aa11.33□□□□□ -0.6
VMP1-213ENST00000591877 PRPF38BQ5VTL8 546 aaKnown RBP11.33□□□□□ -0.6
VMP1-213ENST00000591877 KCTD17Q8N5Z5 321 aa11.33□□□□□ -0.6
VMP1-213ENST00000591877 MTMR14Q8NCE2 650 aa11.33□□□□□ -0.6
VMP1-213ENST00000591877 PURBQ96QR8 312 aaKnown RBP11.33□□□□□ -0.6
VMP1-213ENST00000591877 NAIPQ13075 1403 aa11.33□□□□□ -0.6
VMP1-213ENST00000591877 SPHKAPQ2M3C7 1700 aa11.32□□□□□ -0.6
VMP1-213ENST00000591877 LINC01559Q495D7 138 aa11.32□□□□□ -0.6
VMP1-213ENST00000591877 MRPL14Q6P1L8 145 aaKnown RBP11.32□□□□□ -0.6
VMP1-213ENST00000591877 MOXD2PA6NHM9 499 aa11.31□□□□□ -0.6
VMP1-213ENST00000591877 RETREG3Q86VR2 466 aa11.31□□□□□ -0.6
VMP1-213ENST00000591877 SLC26A8Q96RN1 970 aa11.31□□□□□ -0.6
VMP1-213ENST00000591877 ZNF330Q9Y3S2 320 aaPredicted RBP11.31□□□□□ -0.6
VMP1-213ENST00000591877 RIMS2Q9UQ26 1411 aa11.31□□□□□ -0.6
VMP1-213ENST00000591877 CHD2O14647 1828 aaKnown RBP11.3□□□□□ -0.6
VMP1-213ENST00000591877 TOM1O60784 492 aa11.3□□□□□ -0.6
VMP1-213ENST00000591877 PIP4K2BP78356 416 aa11.3□□□□□ -0.6
VMP1-213ENST00000591877 NNTQ13423 1086 aa11.3□□□□□ -0.6
VMP1-213ENST00000591877 SCARF1Q14162 830 aa11.3□□□□□ -0.6
VMP1-213ENST00000591877 NWD1Q149M9 1564 aa11.29□□□□□ -0.6
VMP1-213ENST00000591877 HRCP23327 699 aa11.29□□□□□ -0.6
VMP1-213ENST00000591877 BAP1Q92560 729 aa11.29□□□□□ -0.6
VMP1-213ENST00000591877 PLEKHG1Q9ULL1 1385 aa11.28□□□□□ -0.6
VMP1-213ENST00000591877 KCNA6P17658 529 aa11.28□□□□□ -0.6
VMP1-213ENST00000591877 HSPA1LP34931 641 aa11.28□□□□□ -0.6
VMP1-213ENST00000591877 KCNMA1Q12791 1236 aa11.28□□□□□ -0.6
VMP1-213ENST00000591877 HFM1A2PYH4 1435 aa11.27□□□□□ -0.6
VMP1-213ENST00000591877 CCNYL3P0C7X3 344 aa11.27□□□□□ -0.61
VMP1-213ENST00000591877 VSIG8P0DPA2 414 aa11.27□□□□□ -0.61
VMP1-213ENST00000591877 UNC93B1Q9H1C4 597 aa11.27□□□□□ -0.61
VMP1-213ENST00000591877 CLTCL1P53675 1640 aa11.27□□□□□ -0.61
VMP1-213ENST00000591877 DISP3Q9P2K9 1392 aa11.27□□□□□ -0.61
VMP1-213ENST00000591877 ADAMTS13Q76LX8 1427 aa11.26□□□□□ -0.61
VMP1-213ENST00000591877 TIMP2P16035 220 aa11.26□□□□□ -0.61
VMP1-213ENST00000591877 GSK3AP49840 483 aa11.26□□□□□ -0.61
VMP1-213ENST00000591877 QPCTQ16769 361 aa11.26□□□□□ -0.61
VMP1-213ENST00000591877 NUTM2DQ5VT03 806 aaPredicted RBP11.26□□□□□ -0.61
VMP1-213ENST00000591877 TMEM94Q12767 1356 aa11.26□□□□□ -0.61
VMP1-213ENST00000591877 ZBTB7CA1YPR0 619 aa11.25□□□□□ -0.61
VMP1-213ENST00000591877 C6orf229H3BNL8 230 aa11.25□□□□□ -0.61
VMP1-213ENST00000591877 WDR4P57081 412 aaKnown RBP11.25□□□□□ -0.61
VMP1-213ENST00000591877 ILDR2Q71H61 639 aa11.25□□□□□ -0.61
VMP1-213ENST00000591877 ZBTB3Q9H5J0 574 aa11.25□□□□□ -0.61
VMP1-213ENST00000591877 GDPD2Q9HCC8 539 aa11.25□□□□□ -0.61
VMP1-213ENST00000591877 NKTRP30414 1462 aaKnown RBP11.25□□□□□ -0.61
VMP1-213ENST00000591877 TRPM2O94759 1503 aa11.25□□□□□ -0.61
VMP1-213ENST00000591877 NRXN3Q9Y4C0 1643 aa11.24□□□□□ -0.61
VMP1-213ENST00000591877 PPP1R15AO75807 674 aaPredicted RBP11.24□□□□□ -0.61
VMP1-213ENST00000591877 NDUFV2P19404 249 aa11.24□□□□□ -0.61
VMP1-213ENST00000591877 TRAIPQ9BWF2 469 aa11.24□□□□□ -0.61
VMP1-213ENST00000591877 PCDHGC3Q9UN70 934 aa11.24□□□□□ -0.61
VMP1-213ENST00000591877 TBX22Q9Y458 520 aa11.24□□□□□ -0.61
VMP1-213ENST00000591877 KIF1BO60333 1816 aa11.23□□□□□ -0.61
VMP1-213ENST00000591877 NUTM2BA6NNL0 878 aaPredicted RBP11.23□□□□□ -0.61
VMP1-213ENST00000591877 NUTM2EB1AL46 878 aaPredicted RBP11.23□□□□□ -0.61
VMP1-213ENST00000591877 USP17L8P0C7I0 530 aa11.23□□□□□ -0.61
VMP1-213ENST00000591877 CSPP1Q1MSJ5 1256 aa11.23□□□□□ -0.61
VMP1-213ENST00000591877 NUTM2AQ8IVF1 878 aaPredicted RBP11.23□□□□□ -0.61
VMP1-213ENST00000591877 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.23□□□□□ -0.61
VMP1-213ENST00000591877 PCDHB15Q9Y5E8 787 aa11.23□□□□□ -0.61
VMP1-213ENST00000591877 DIP2AQ14689 1571 aa11.23□□□□□ -0.61
VMP1-213ENST00000591877 AP1G2O75843 785 aa11.22□□□□□ -0.61
VMP1-213ENST00000591877 ADH1CP00326 375 aa11.22□□□□□ -0.61
VMP1-213ENST00000591877 FDX1P10109 184 aa11.22□□□□□ -0.61
VMP1-213ENST00000591877 VARSP26640 1264 aaKnown RBP11.22□□□□□ -0.61
VMP1-213ENST00000591877 RTL5Q5HYW3 569 aaPredicted RBP11.22□□□□□ -0.61
VMP1-213ENST00000591877 EVA1BQ9NVM1 165 aa11.22□□□□□ -0.61
VMP1-213ENST00000591877 NEXMIFQ5QGS0 1516 aa11.21□□□□□ -0.61
VMP1-213ENST00000591877 ZNF511Q8NB15 262 aa11.21□□□□□ -0.61
VMP1-213ENST00000591877 NDUFB9Q9Y6M9 179 aa11.21□□□□□ -0.61
VMP1-213ENST00000591877 MED1Q15648 1581 aaPredicted RBP11.2□□□□□ -0.62
VMP1-213ENST00000591877 SETBP1Q9Y6X0 1596 aa11.2□□□□□ -0.62
VMP1-213ENST00000591877 PTPRUQ92729 1446 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms