RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 SYT17Q9BSW7 474 aa13.21□□□□□ -0.29
BRCA1-227ENST00000591849 SCN11AQ9UI33 1791 aa13.21□□□□□ -0.29
BRCA1-227ENST00000591849 C4BP0C0L5 1744 aa13.21□□□□□ -0.3
BRCA1-227ENST00000591849 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
BRCA1-227ENST00000591849 TSPYL4Q9UJ04 414 aa13.2□□□□□ -0.3
BRCA1-227ENST00000591849 LAS1LQ9Y4W2 734 aaKnown RBP13.2□□□□□ -0.3
BRCA1-227ENST00000591849 A0A087WZG4 1122 aa13.19□□□□□ -0.3
BRCA1-227ENST00000591849 ZBTB1Q9Y2K1 713 aa13.19□□□□□ -0.3
BRCA1-227ENST00000591849 APAF1O14727 1248 aa13.18□□□□□ -0.3
BRCA1-227ENST00000591849 CCDC184Q52MB2 194 aa13.18□□□□□ -0.3
BRCA1-227ENST00000591849 SRP68Q9UHB9 627 aaKnown RBP13.18□□□□□ -0.3
BRCA1-227ENST00000591849 USP16Q9Y5T5 823 aa13.18□□□□□ -0.3
BRCA1-227ENST00000591849 A1BGP04217 495 aa13.17□□□□□ -0.3
BRCA1-227ENST00000591849 MMP10P09238 476 aa13.17□□□□□ -0.3
BRCA1-227ENST00000591849 PELP1Q8IZL8 1130 aaKnown RBP13.17□□□□□ -0.3
BRCA1-227ENST00000591849 PARP3Q9Y6F1 533 aa13.17□□□□□ -0.3
BRCA1-227ENST00000591849 SOS1Q07889 1333 aaPredicted RBP13.16□□□□□ -0.3
BRCA1-227ENST00000591849 GYS1P13807 737 aa13.16□□□□□ -0.3
BRCA1-227ENST00000591849 USPL1Q5W0Q7 1092 aa13.16□□□□□ -0.3
BRCA1-227ENST00000591849 KCPQ6ZWJ8 1503 aa13.16□□□□□ -0.3
BRCA1-227ENST00000591849 EIF4A1P60842 406 aaKnown RBP13.15□□□□□ -0.3
BRCA1-227ENST00000591849 CALD1Q05682 793 aaKnown RBP13.15□□□□□ -0.3
BRCA1-227ENST00000591849 BABAM1Q9NWV8 329 aa13.15□□□□□ -0.3
BRCA1-227ENST00000591849 NARFQ9UHQ1 456 aa13.15□□□□□ -0.3
BRCA1-227ENST00000591849 ADAMTS7Q9UKP4 1686 aa13.15□□□□□ -0.31
BRCA1-227ENST00000591849 USP42Q9H9J4 1324 aaKnown RBP13.14□□□□□ -0.31
BRCA1-227ENST00000591849 UBR3Q6ZT12 1888 aa13.14□□□□□ -0.31
BRCA1-227ENST00000591849 PRAMEF22A3QJZ6 481 aa13.14□□□□□ -0.31
BRCA1-227ENST00000591849 IL6STP40189 918 aaPredicted RBP13.14□□□□□ -0.31
BRCA1-227ENST00000591849 FKBP8Q14318 412 aa13.14□□□□□ -0.31
BRCA1-227ENST00000591849 GPR162Q16538 588 aa13.14□□□□□ -0.31
BRCA1-227ENST00000591849 FAM9BQ8IZU0 186 aa13.14□□□□□ -0.31
BRCA1-227ENST00000591849 ZNF784Q8NCA9 323 aaPredicted RBP13.14□□□□□ -0.31
BRCA1-227ENST00000591849 TRIM35Q9UPQ4 493 aa13.14□□□□□ -0.31
BRCA1-227ENST00000591849 CD2APQ9Y5K6 639 aa13.14□□□□□ -0.31
BRCA1-227ENST00000591849 COL15A1P39059 1388 aa13.14□□□□□ -0.31
BRCA1-227ENST00000591849 GIGYF1O75420 1035 aaPredicted RBP13.13□□□□□ -0.31
BRCA1-227ENST00000591849 PIP4K2AP48426 406 aaPredicted RBP13.13□□□□□ -0.31
BRCA1-227ENST00000591849 EIF5P55010 431 aaKnown RBP13.13□□□□□ -0.31
BRCA1-227ENST00000591849 NGEFQ8N5V2 710 aa13.13□□□□□ -0.31
BRCA1-227ENST00000591849 TBC1D2BQ9UPU7 963 aa13.13□□□□□ -0.31
BRCA1-227ENST00000591849 ZNF831Q5JPB2 1677 aa13.12□□□□□ -0.31
BRCA1-227ENST00000591849 SENP3-EIF4A1A0A087X0R7 540 aa13.12□□□□□ -0.31
BRCA1-227ENST00000591849 EIF2S2P20042 333 aaKnown RBP13.12□□□□□ -0.31
BRCA1-227ENST00000591849 BICDL1Q6ZP65 573 aa13.12□□□□□ -0.31
BRCA1-227ENST00000591849 DZIP3Q86Y13 1208 aaKnown RBP13.12□□□□□ -0.31
BRCA1-227ENST00000591849 CHL1O00533 1208 aa13.11□□□□□ -0.31
BRCA1-227ENST00000591849 NPHP1O15259 732 aa13.11□□□□□ -0.31
BRCA1-227ENST00000591849 NLGN2Q8NFZ4 835 aa13.11□□□□□ -0.31
BRCA1-227ENST00000591849 SALL2Q9Y467 1007 aaPredicted RBP13.11□□□□□ -0.31
BRCA1-227ENST00000591849 MYL6BP14649 208 aa13.1□□□□□ -0.31
BRCA1-227ENST00000591849 GNAI1P63096 354 aa13.1□□□□□ -0.31
BRCA1-227ENST00000591849 CFAP44Q96MT7 982 aa13.1□□□□□ -0.31
BRCA1-227ENST00000591849 TM4SF1P30408 202 aa13.09□□□□□ -0.31
BRCA1-227ENST00000591849 TJP1Q07157 1748 aa13.09□□□□□ -0.31
BRCA1-227ENST00000591849 NFIXQ14938 502 aa13.09□□□□□ -0.31
BRCA1-227ENST00000591849 NECTIN2Q92692 538 aa13.09□□□□□ -0.31
BRCA1-227ENST00000591849 SETDB2Q96T68 719 aa13.09□□□□□ -0.31
BRCA1-227ENST00000591849 ZNF652Q9Y2D9 606 aa13.09□□□□□ -0.31
BRCA1-227ENST00000591849 COL5A3P25940 1745 aaPredicted RBP13.08□□□□□ -0.32
BRCA1-227ENST00000591849 NBPF26B4DH59 902 aa13.08□□□□□ -0.32
BRCA1-227ENST00000591849 NBPF10Q6P3W6 841 aaKnown RBP13.08□□□□□ -0.32
BRCA1-227ENST00000591849 KIF6Q6ZMV9 814 aa13.08□□□□□ -0.32
BRCA1-227ENST00000591849 NBPF15Q8N660 670 aa13.08□□□□□ -0.32
BRCA1-227ENST00000591849 BCL2L12Q9HB09 334 aa13.08□□□□□ -0.32
BRCA1-227ENST00000591849 IFT57Q9NWB7 429 aa13.08□□□□□ -0.32
BRCA1-227ENST00000591849 VIRMAQ69YN4 1812 aaKnown RBP13.08□□□□□ -0.32
BRCA1-227ENST00000591849 MYH14Q7Z406 1995 aaKnown RBP13.07□□□□□ -0.32
BRCA1-227ENST00000591849 POLRMTO00411 1230 aaKnown RBP13.07□□□□□ -0.32
BRCA1-227ENST00000591849 SERPINB2P05120 415 aa13.07□□□□□ -0.32
BRCA1-227ENST00000591849 TGFB2P61812 414 aa13.07□□□□□ -0.32
BRCA1-227ENST00000591849 DDR1Q08345 913 aa13.07□□□□□ -0.32
BRCA1-227ENST00000591849 MBIPQ9NS73 344 aa13.07□□□□□ -0.32
BRCA1-227ENST00000591849 WWC3Q9ULE0 1092 aa13.07□□□□□ -0.32
BRCA1-227ENST00000591849 SIPA1L3O60292 1781 aaPredicted RBP13.07□□□□□ -0.32
BRCA1-227ENST00000591849 GRIN3BO60391 1043 aa13.06□□□□□ -0.32
BRCA1-227ENST00000591849 CAMTA2O94983 1202 aa13.06□□□□□ -0.32
BRCA1-227ENST00000591849 TBC1D9BQ66K14 1250 aa13.06□□□□□ -0.32
BRCA1-227ENST00000591849 UBR2Q8IWV8 1755 aa13.06□□□□□ -0.32
BRCA1-227ENST00000591849 ERBB4Q15303 1308 aa13.06□□□□□ -0.32
BRCA1-227ENST00000591849 DLG5Q8TDM6 1919 aa13.05□□□□□ -0.32
BRCA1-227ENST00000591849 A0A0G2JLW4 131 aa13.05□□□□□ -0.32
BRCA1-227ENST00000591849 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
BRCA1-227ENST00000591849 KRT24Q2M2I5 525 aa13.05□□□□□ -0.32
BRCA1-227ENST00000591849 HDGFL1Q5TGJ6 251 aa13.05□□□□□ -0.32
BRCA1-227ENST00000591849 DUSP27Q5VZP5 1158 aa13.05□□□□□ -0.32
BRCA1-227ENST00000591849 CLEC4GQ6UXB4 293 aa13.05□□□□□ -0.32
BRCA1-227ENST00000591849 WWC1Q8IX03 1113 aa13.05□□□□□ -0.32
BRCA1-227ENST00000591849 CHMP4AQ9BY43 222 aa13.05□□□□□ -0.32
BRCA1-227ENST00000591849 CICQ96RK0 1608 aaPredicted RBP13.05□□□□□ -0.32
BRCA1-227ENST00000591849 DPEP1P16444 411 aa13.04□□□□□ -0.32
BRCA1-227ENST00000591849 GTF2E1P29083 439 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-227ENST00000591849 AIMP1Q12904 312 aaKnown RBP13.04□□□□□ -0.32
BRCA1-227ENST00000591849 CCDC27Q2M243 656 aa13.04□□□□□ -0.32
BRCA1-227ENST00000591849 DIEXFQ68CQ4 756 aaKnown RBP13.04□□□□□ -0.32
BRCA1-227ENST00000591849 NIP7Q9Y221 180 aaKnown RBP eCLIP13.04□□□□□ -0.32
BRCA1-227ENST00000591849 KIF13BQ9NQT8 1826 aa13.04□□□□□ -0.32
BRCA1-227ENST00000591849 FAM177BA6PVY3 158 aa13.03□□□□□ -0.32
BRCA1-227ENST00000591849 ANXA1P04083 346 aa13.03□□□□□ -0.32
BRCA1-227ENST00000591849 HOXB7P09629 217 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms