RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 NCAPD2Q15021 1401 aa12.91□□□□□ -0.34
BRCA1-226ENST00000591534 TTLL13PA6NNM8 815 aa12.91□□□□□ -0.34
BRCA1-226ENST00000591534 PHKG2P15735 406 aa12.91□□□□□ -0.34
BRCA1-226ENST00000591534 MKRN3Q13064 507 aaKnown RBP12.91□□□□□ -0.34
BRCA1-226ENST00000591534 RGPD2P0DJD1 1756 aa12.91□□□□□ -0.34
BRCA1-226ENST00000591534 KIF20BQ96Q89 1820 aa12.9□□□□□ -0.34
BRCA1-226ENST00000591534 ERVV-2B6SEH9 535 aa12.9□□□□□ -0.34
BRCA1-226ENST00000591534 GNPATO15228 680 aa12.9□□□□□ -0.34
BRCA1-226ENST00000591534 EIF4G2P78344 907 aaKnown RBP eCLIP12.9□□□□□ -0.34
BRCA1-226ENST00000591534 PLEKHO1Q53GL0 409 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-226ENST00000591534 DCBLD2Q96PD2 775 aa12.9□□□□□ -0.34
BRCA1-226ENST00000591534 GPBP1L1Q9HC44 474 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-226ENST00000591534 TNNT2P45379 298 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-226ENST00000591534 EIF4A2Q14240 407 aaKnown RBP12.89□□□□□ -0.35
BRCA1-226ENST00000591534 AMOTQ4VCS5 1084 aa12.89□□□□□ -0.35
BRCA1-226ENST00000591534 TRAPPC3LQ5T215 181 aa12.89□□□□□ -0.35
BRCA1-226ENST00000591534 LINC00116Q8NCU8 138 aa12.89□□□□□ -0.35
BRCA1-226ENST00000591534 DCAF5Q96JK2 942 aa12.89□□□□□ -0.35
BRCA1-226ENST00000591534 BMP2KQ9NSY1 1161 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-226ENST00000591534 ASAP1Q9ULH1 1129 aa12.89□□□□□ -0.35
BRCA1-226ENST00000591534 RTCBQ9Y3I0 505 aaKnown RBP12.89□□□□□ -0.35
BRCA1-226ENST00000591534 C5P01031 1676 aa12.89□□□□□ -0.35
BRCA1-226ENST00000591534 TIE1P35590 1138 aa12.88□□□□□ -0.35
BRCA1-226ENST00000591534 NLGN1Q8N2Q7 840 aa12.88□□□□□ -0.35
BRCA1-226ENST00000591534 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
BRCA1-226ENST00000591534 ATG3Q9NT62 314 aa12.87□□□□□ -0.35
BRCA1-226ENST00000591534 TUBGCP6Q96RT7 1819 aa12.87□□□□□ -0.35
BRCA1-226ENST00000591534 C4BP0C0L5 1744 aa12.87□□□□□ -0.35
BRCA1-226ENST00000591534 CABP4P57796 275 aa12.86□□□□□ -0.35
BRCA1-226ENST00000591534 C1orf141Q5JVX7 400 aa12.86□□□□□ -0.35
BRCA1-226ENST00000591534 RC3H1Q5TC82 1133 aaKnown RBP12.86□□□□□ -0.35
BRCA1-226ENST00000591534 ATP10DQ9P241 1426 aa12.86□□□□□ -0.35
BRCA1-226ENST00000591534 PKD1L3Q7Z443 1732 aa12.85□□□□□ -0.35
BRCA1-226ENST00000591534 MMP10P09238 476 aa12.85□□□□□ -0.35
BRCA1-226ENST00000591534 RFC4P35249 363 aa12.85□□□□□ -0.35
BRCA1-226ENST00000591534 CLCN6P51797 869 aa12.85□□□□□ -0.35
BRCA1-226ENST00000591534 TGFB2P61812 414 aa12.85□□□□□ -0.35
BRCA1-226ENST00000591534 ITPK1Q13572 414 aa12.85□□□□□ -0.35
BRCA1-226ENST00000591534 MORC1Q86VD1 984 aa12.85□□□□□ -0.35
BRCA1-226ENST00000591534 PANK3Q9H999 370 aa12.85□□□□□ -0.35
BRCA1-226ENST00000591534 MTHFSP49914 203 aa12.84□□□□□ -0.35
BRCA1-226ENST00000591534 ZNF530Q6P9A1 599 aaPredicted RBP12.84□□□□□ -0.35
BRCA1-226ENST00000591534 CCDC87Q9NVE4 849 aa12.84□□□□□ -0.35
BRCA1-226ENST00000591534 KNSTRNQ9Y448 316 aa12.84□□□□□ -0.35
BRCA1-226ENST00000591534 AMIGO3Q86WK7 504 aa12.83□□□□□ -0.36
BRCA1-226ENST00000591534 TRIM35Q9UPQ4 493 aa12.83□□□□□ -0.36
BRCA1-226ENST00000591534 PARP3Q9Y6F1 533 aa12.83□□□□□ -0.36
BRCA1-226ENST00000591534 CNTNAP4Q9C0A0 1308 aa12.83□□□□□ -0.36
BRCA1-226ENST00000591534 RPS6KA4O75676 772 aa12.82□□□□□ -0.36
BRCA1-226ENST00000591534 LARP6Q9BRS8 491 aaKnown RBP12.82□□□□□ -0.36
BRCA1-226ENST00000591534 ANKRD26Q9UPS8 1709 aa12.82□□□□□ -0.36
BRCA1-226ENST00000591534 TAF1LQ8IZX4 1826 aa12.81□□□□□ -0.36
BRCA1-226ENST00000591534 HSPA5P11021 654 aaKnown RBP12.81□□□□□ -0.36
BRCA1-226ENST00000591534 SMIM5Q71RC9 77 aa12.81□□□□□ -0.36
BRCA1-226ENST00000591534 ZNF526Q8TF50 670 aaPredicted RBP12.81□□□□□ -0.36
BRCA1-226ENST00000591534 ARHGEF1Q92888 912 aaKnown RBP12.81□□□□□ -0.36
BRCA1-226ENST00000591534 TOGARAM1Q9Y4F4 1720 aa12.81□□□□□ -0.36
BRCA1-226ENST00000591534 ITGB4P16144 1822 aa12.81□□□□□ -0.36
BRCA1-226ENST00000591534 ADCY9O60503 1353 aa12.81□□□□□ -0.36
BRCA1-226ENST00000591534 DPY19L2Q6NUT2 758 aa12.8□□□□□ -0.36
BRCA1-226ENST00000591534 WWC3Q9ULE0 1092 aa12.8□□□□□ -0.36
BRCA1-226ENST00000591534 KDRP35968 1356 aa12.8□□□□□ -0.36
BRCA1-226ENST00000591534 PTCD1O75127 700 aaKnown RBP12.79□□□□□ -0.36
BRCA1-226ENST00000591534 HSPA6P17066 643 aa12.79□□□□□ -0.36
BRCA1-226ENST00000591534 E2F4Q16254 413 aa12.79□□□□□ -0.36
BRCA1-226ENST00000591534 SULT6B1Q6IMI4 303 aa12.79□□□□□ -0.36
BRCA1-226ENST00000591534 NFATC2IPQ8NCF5 419 aa12.79□□□□□ -0.36
BRCA1-226ENST00000591534 BCS1LQ9Y276 419 aa12.79□□□□□ -0.36
BRCA1-226ENST00000591534 UBR3Q6ZT12 1888 aa12.78□□□□□ -0.36
BRCA1-226ENST00000591534 GYS1P13807 737 aa12.78□□□□□ -0.36
BRCA1-226ENST00000591534 PDE4AP27815 886 aa12.78□□□□□ -0.36
BRCA1-226ENST00000591534 ARHGAP27Q6ZUM4 889 aa12.78□□□□□ -0.36
BRCA1-226ENST00000591534 MAP2P11137 1827 aaKnown RBP12.78□□□□□ -0.36
BRCA1-226ENST00000591534 A0A0G2JLW4 131 aa12.77□□□□□ -0.37
BRCA1-226ENST00000591534 FCHSD2O94868 740 aa12.77□□□□□ -0.37
BRCA1-226ENST00000591534 AKAP4Q5JQC9 854 aa12.77□□□□□ -0.37
BRCA1-226ENST00000591534 SLC4A9Q96Q91 983 aa12.77□□□□□ -0.37
BRCA1-226ENST00000591534 CEP350Q5VT06 3117 aa12.76□□□□□ -0.37
BRCA1-226ENST00000591534 ZPR1O75312 459 aa12.76□□□□□ -0.37
BRCA1-226ENST00000591534 CRKLP46109 303 aaKnown RBP12.76□□□□□ -0.37
BRCA1-226ENST00000591534 ATN1P54259 1190 aaPredicted RBP12.76□□□□□ -0.37
BRCA1-226ENST00000591534 PIM2Q9P1W9 311 aa12.76□□□□□ -0.37
BRCA1-226ENST00000591534 PXDNLA1KZ92 1463 aa12.75□□□□□ -0.37
BRCA1-226ENST00000591534 KDM6AO15550 1401 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-226ENST00000591534 DPEP1P16444 411 aa12.75□□□□□ -0.37
BRCA1-226ENST00000591534 IL13P35225 146 aa12.75□□□□□ -0.37
BRCA1-226ENST00000591534 C10orf71Q711Q0 1435 aa12.75□□□□□ -0.37
BRCA1-226ENST00000591534 AEBP1Q8IUX7 1158 aa12.75□□□□□ -0.37
BRCA1-226ENST00000591534 CRISPLD2Q9H0B8 497 aa12.75□□□□□ -0.37
BRCA1-226ENST00000591534 ZNF831Q5JPB2 1677 aa12.74□□□□□ -0.37
BRCA1-226ENST00000591534 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
BRCA1-226ENST00000591534 TOMM70O94826 608 aa12.74□□□□□ -0.37
BRCA1-226ENST00000591534 DALRD3Q5D0E6 543 aaKnown RBP12.74□□□□□ -0.37
BRCA1-226ENST00000591534 CICQ96RK0 1608 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-226ENST00000591534 KIF3CO14782 793 aa12.73□□□□□ -0.37
BRCA1-226ENST00000591534 APLP1P51693 650 aa12.73□□□□□ -0.37
BRCA1-226ENST00000591534 C16orf71Q8IYS4 520 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-226ENST00000591534 SLC52A2Q9HAB3 445 aa12.73□□□□□ -0.37
BRCA1-226ENST00000591534 IFFO2Q5TF58 517 aa12.72□□□□□ -0.37
BRCA1-226ENST00000591534 KDM2BQ8NHM5 1336 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms