RNA–Protein interactions for RNA: ENST00000591348.5

CROCCP3-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best)

Gene CROCCP3, Length 1,695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-206ENST00000591348 NECTIN2Q92692 538 aa28.17■■■□□ 2.1
CROCCP3-206ENST00000591348 LAMB4A4D0S4 1761 aa28.16■■■□□ 2.1
CROCCP3-206ENST00000591348 HMGB2P26583 209 aaKnown RBP28.16■■■□□ 2.1
CROCCP3-206ENST00000591348 CYP19A1P11511 503 aaPredicted RBP28.16■■■□□ 2.1
CROCCP3-206ENST00000591348 LINC00116Q8NCU8 138 aa28.16■■■□□ 2.1
CROCCP3-206ENST00000591348 CCDC30Q5VVM6 783 aa28.14■■■□□ 2.1
CROCCP3-206ENST00000591348 ZNF428Q96B54 188 aa28.13■■■□□ 2.09
CROCCP3-206ENST00000591348 TAF1LQ8IZX4 1826 aa28.12■■■□□ 2.09
CROCCP3-206ENST00000591348 COL5A3P25940 1745 aaPredicted RBP28.12■■■□□ 2.09
CROCCP3-206ENST00000591348 CRKLP46109 303 aaKnown RBP28.12■■■□□ 2.09
CROCCP3-206ENST00000591348 A1BGP04217 495 aa28.11■■■□□ 2.09
CROCCP3-206ENST00000591348 STK31Q9BXU1 1019 aa28.1■■■□□ 2.09
CROCCP3-206ENST00000591348 CCDC87Q9NVE4 849 aa28.1■■■□□ 2.09
CROCCP3-206ENST00000591348 ERBB4Q15303 1308 aa28.1■■■□□ 2.09
CROCCP3-206ENST00000591348 CNTNAP4Q9C0A0 1308 aa28.1■■■□□ 2.09
CROCCP3-206ENST00000591348 TCERG1O14776 1098 aaKnown RBP28.1■■■□□ 2.09
CROCCP3-206ENST00000591348 CHPF2Q9P2E5 772 aa28.09■■■□□ 2.09
CROCCP3-206ENST00000591348 DBF4Q9UBU7 674 aaPredicted RBP28.09■■■□□ 2.09
CROCCP3-206ENST00000591348 C4BP0C0L5 1744 aa28.08■■■□□ 2.09
CROCCP3-206ENST00000591348 PIP4K2AP48426 406 aaPredicted RBP28.08■■■□□ 2.09
CROCCP3-206ENST00000591348 RC3H1Q5TC82 1133 aaKnown RBP28.08■■■□□ 2.09
CROCCP3-206ENST00000591348 ZBTB1Q9Y2K1 713 aa28.08■■■□□ 2.09
CROCCP3-206ENST00000591348 RREB1Q92766 1687 aa28.08■■■□□ 2.09
CROCCP3-206ENST00000591348 INTS5Q6P9B9 1019 aaKnown RBP28.07■■■□□ 2.08
CROCCP3-206ENST00000591348 AK7Q96M32 723 aa28.07■■■□□ 2.08
CROCCP3-206ENST00000591348 CANXP27824 592 aaKnown RBP28.07■■■□□ 2.08
CROCCP3-206ENST00000591348 RARSP54136 660 aaKnown RBP28.07■■■□□ 2.08
CROCCP3-206ENST00000591348 ALDH1L2Q3SY69 923 aa28.07■■■□□ 2.08
CROCCP3-206ENST00000591348 DDX21Q9NR30 783 aaKnown RBP eCLIP28.07■■■□□ 2.08
CROCCP3-206ENST00000591348 MYH14Q7Z406 1995 aaKnown RBP28.06■■■□□ 2.08
CROCCP3-206ENST00000591348 MYL6BP14649 208 aa28.06■■■□□ 2.08
CROCCP3-206ENST00000591348 SSH1Q8WYL5 1049 aa28.06■■■□□ 2.08
CROCCP3-206ENST00000591348 NBPF26B4DH59 902 aa28.05■■■□□ 2.08
CROCCP3-206ENST00000591348 PDIA6Q15084 440 aa28.05■■■□□ 2.08
CROCCP3-206ENST00000591348 NBPF14Q5TI25 921 aa28.05■■■□□ 2.08
CROCCP3-206ENST00000591348 NBPF10Q6P3W6 841 aaKnown RBP28.05■■■□□ 2.08
CROCCP3-206ENST00000591348 NBPF15Q8N660 670 aa28.05■■■□□ 2.08
CROCCP3-206ENST00000591348 BCL2L13Q9BXK5 485 aa28.05■■■□□ 2.08
CROCCP3-206ENST00000591348 SMC4Q9NTJ3 1288 aa28.05■■■□□ 2.08
CROCCP3-206ENST00000591348 GNPATO15228 680 aa28.04■■■□□ 2.08
CROCCP3-206ENST00000591348 ANXA1P04083 346 aa28.04■■■□□ 2.08
CROCCP3-206ENST00000591348 SLC4A2P04920 1241 aa28.04■■■□□ 2.08
CROCCP3-206ENST00000591348 RCAN3Q9UKA8 241 aa28.04■■■□□ 2.08
CROCCP3-206ENST00000591348 PROSER3Q2NL68 480 aa28.03■■■□□ 2.08
CROCCP3-206ENST00000591348 NPM2Q86SE8 214 aaKnown RBP28.03■■■□□ 2.08
CROCCP3-206ENST00000591348 ZNF330Q9Y3S2 320 aaPredicted RBP28.03■■■□□ 2.08
CROCCP3-206ENST00000591348 NUP188Q5SRE5 1749 aa28.03■■■□□ 2.08
CROCCP3-206ENST00000591348 IL6STP40189 918 aaPredicted RBP28.03■■■□□ 2.08
CROCCP3-206ENST00000591348 HYPKQ9NX55 129 aa28.03■■■□□ 2.08
CROCCP3-206ENST00000591348 RTCBQ9Y3I0 505 aaKnown RBP28.02■■■□□ 2.08
CROCCP3-206ENST00000591348 RPS6KA4O75676 772 aa28■■■□□ 2.07
CROCCP3-206ENST00000591348 CENPBP07199 599 aaPredicted RBP28■■■□□ 2.07
CROCCP3-206ENST00000591348 ZNF827Q17R98 1081 aa28■■■□□ 2.07
CROCCP3-206ENST00000591348 AKT1S1Q96B36 256 aa28■■■□□ 2.07
CROCCP3-206ENST00000591348 CACNA1FO60840 1977 aa27.99■■■□□ 2.07
CROCCP3-206ENST00000591348 BCAR3O75815 825 aa27.99■■■□□ 2.07
CROCCP3-206ENST00000591348 EIF5P55010 431 aaKnown RBP27.99■■■□□ 2.07
CROCCP3-206ENST00000591348 MRPL50Q8N5N7 158 aaKnown RBP27.99■■■□□ 2.07
CROCCP3-206ENST00000591348 ANO8Q9HCE9 1232 aaPredicted RBP27.99■■■□□ 2.07
CROCCP3-206ENST00000591348 STK32BQ9NY57 414 aa27.99■■■□□ 2.07
CROCCP3-206ENST00000591348 TFCP2L1Q9NZI6 479 aa27.99■■■□□ 2.07
CROCCP3-206ENST00000591348 LRP10Q7Z4F1 713 aa27.98■■■□□ 2.07
CROCCP3-206ENST00000591348 PHAXQ9H814 394 aaKnown RBP27.97■■■□□ 2.07
CROCCP3-206ENST00000591348 AIMP1Q12904 312 aaKnown RBP27.97■■■□□ 2.07
CROCCP3-206ENST00000591348 COL15A1P39059 1388 aa27.97■■■□□ 2.07
CROCCP3-206ENST00000591348 PHF14O94880 888 aa27.96■■■□□ 2.07
CROCCP3-206ENST00000591348 SLC15A2Q16348 729 aa27.96■■■□□ 2.07
CROCCP3-206ENST00000591348 XAGE3Q8WTP9 111 aa27.96■■■□□ 2.07
CROCCP3-206ENST00000591348 ARXQ96QS3 562 aa27.96■■■□□ 2.07
CROCCP3-206ENST00000591348 SSFA2P28290 1259 aa27.95■■■□□ 2.07
CROCCP3-206ENST00000591348 BRPF1P55201 1214 aaPredicted RBP27.95■■■□□ 2.07
CROCCP3-206ENST00000591348 FLIIQ13045 1269 aa27.95■■■□□ 2.07
CROCCP3-206ENST00000591348 COPS6Q7L5N1 327 aa27.95■■■□□ 2.07
CROCCP3-206ENST00000591348 G2E3Q7L622 706 aa27.95■■■□□ 2.07
CROCCP3-206ENST00000591348 UBR3Q6ZT12 1888 aa27.95■■■□□ 2.06
CROCCP3-206ENST00000591348 KIF16BQ96L93 1317 aa27.94■■■□□ 2.06
CROCCP3-206ENST00000591348 SMIM5Q71RC9 77 aa27.94■■■□□ 2.06
CROCCP3-206ENST00000591348 AMIGO3Q86WK7 504 aa27.94■■■□□ 2.06
CROCCP3-206ENST00000591348 A0A087WZG4 1122 aa27.94■■■□□ 2.06
CROCCP3-206ENST00000591348 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.94■■■□□ 2.06
CROCCP3-206ENST00000591348 ADRA2BP18089 450 aa27.94■■■□□ 2.06
CROCCP3-206ENST00000591348 TRAPPC3LQ5T215 181 aa27.94■■■□□ 2.06
CROCCP3-206ENST00000591348 FKBP5Q13451 457 aaPredicted RBP27.92■■■□□ 2.06
CROCCP3-206ENST00000591348 DZIP3Q86Y13 1208 aaKnown RBP27.92■■■□□ 2.06
CROCCP3-206ENST00000591348 KIF6Q6ZMV9 814 aa27.91■■■□□ 2.06
CROCCP3-206ENST00000591348 TTLL7Q6ZT98 887 aa27.91■■■□□ 2.06
CROCCP3-206ENST00000591348 FRAT1Q92837 279 aaPredicted RBP27.91■■■□□ 2.06
CROCCP3-206ENST00000591348 DDX58O95786 925 aaKnown RBP27.91■■■□□ 2.06
CROCCP3-206ENST00000591348 FLAD1Q8NFF5 587 aa27.91■■■□□ 2.06
CROCCP3-206ENST00000591348 NOB1Q9ULX3 412 aaKnown RBP27.91■■■□□ 2.06
CROCCP3-206ENST00000591348 TBC1D2BQ9UPU7 963 aa27.91■■■□□ 2.06
CROCCP3-206ENST00000591348 PTPRCP08575 1304 aa27.9■■■□□ 2.06
CROCCP3-206ENST00000591348 ARHGEF1Q92888 912 aaKnown RBP27.9■■■□□ 2.06
CROCCP3-206ENST00000591348 SOCS7O14512 581 aa27.89■■■□□ 2.06
CROCCP3-206ENST00000591348 RFC4P35249 363 aa27.89■■■□□ 2.06
CROCCP3-206ENST00000591348 ANKRD13DQ6ZTN6 518 aa27.88■■■□□ 2.05
CROCCP3-206ENST00000591348 TUBGCP6Q96RT7 1819 aa27.88■■■□□ 2.05
CROCCP3-206ENST00000591348 IPO8O15397 1037 aaKnown RBP27.87■■■□□ 2.05
CROCCP3-206ENST00000591348 PNPLA7Q6ZV29 1317 aa27.87■■■□□ 2.05
CROCCP3-206ENST00000591348 ZPR1O75312 459 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms